FFCP PHASE1:Hg19::chr8:107782463..107782479,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137735 | |EntrezGene=137735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30655 | |HGNC=30655 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0Z2 | |UniProt=Q8N0Z2 | ||
|association_with_transcript=0bp_to_ENST00000311955,NM_139166,uc003ymm.3_5end | |association_with_transcript=0bp_to_ENST00000311955,NM_139166,uc003ymm.3_5end | ||
|cluster_id=chr8:107782463..107782479,- | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_1_at_ABRA_5end | |description=CAGE_peak_1_at_ABRA_5end | ||
|id=chr8:107782463..107782479,- | |id=chr8:107782463..107782479,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.13e-10;65!UBERON:0005062;1.38e-10;4!UBERON:0007284;1.38e-10;4!UBERON:0007297;3.68e-09;2!UBERON:0006965;4.82e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.46e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.40e-09,2 | |||
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| ||
|short_description=p1@ABRA | |short_description=p1@ABRA | ||
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Latest revision as of 02:38, 25 September 2015
Short description: | p1@ABRA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABRA_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000311955, NM_139166, uc003ymm.3_5end |
EntrezGene: | ABRA |
HGNC: | 30655 |
UniProt: | Q8N0Z2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.46e-39 | 114 |
valve | 5.71e-14 | 3 |
cardiac mesenchyme | 5.71e-14 | 3 |
cardial valve | 5.71e-14 | 3 |
tunica intima | 5.71e-14 | 3 |
heart layer | 5.71e-14 | 3 |
endocardium | 5.71e-14 | 3 |
endocardial cushion | 5.71e-14 | 3 |
presumptive endocardium | 5.71e-14 | 3 |
cardiac chamber | 1.52e-13 | 3 |
male genital duct | 7.42e-13 | 3 |
internal male genitalia | 7.42e-13 | 3 |
compound organ | 2.29e-12 | 68 |
primary circulatory organ | 1.85e-11 | 27 |
muscle structure | 3.83e-10 | 2 |
muscle organ | 3.83e-10 | 2 |
atrioventricular valve | 7.69e-10 | 2 |
throat | 8.39e-10 | 2 |
duct of male reproductive system | 9.25e-10 | 4 |
cardiac atrium | 1.59e-09 | 2 |
future cardiac atrium | 1.59e-09 | 2 |
open tracheal system trachea | 2.05e-09 | 2 |
male reproductive organ | 3.31e-09 | 11 |
major salivary gland | 5.56e-09 | 2 |
orifice | 1.32e-07 | 36 |
tongue | 5.29e-07 | 3 |
gustatory system | 5.29e-07 | 3 |
future tongue | 5.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.40e-09 | 2 |