FFCP PHASE1:Hg19::chr7:80548401..80548423,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000487621_5end | |association_with_transcript=74bp_to_ENST00000487621_5end | ||
|cluster_id=chr7:80548401..80548423,- | |||
|coexpression_cluster_id=C958 | |coexpression_cluster_id=C958 | ||
|description=CAGE_peak_4_at_SEMA3C_5end | |description=CAGE_peak_4_at_SEMA3C_5end | ||
|id=chr7:80548401..80548423,- | |id=chr7:80548401..80548423,- | ||
|ontology_enrichment_celltype=CL:0000055!1.59e-09!180 | |ontology_enrichment_celltype=CL:0000055!1.59e-09!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.45e-07!14 | |ontology_enrichment_disease=DOID:2394!4.45e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.07e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.07e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.76e-14!659;UBERON:0000467!7.23e-13!625;UBERON:0000480!1.44e-12!626;UBERON:0000062!1.01e-10!511;UBERON:0000475!1.74e-09!365;UBERON:0002050!2.09e-09!605;UBERON:0005423!2.09e-09!605;UBERON:0000923!3.93e-09!604;UBERON:0005291!3.93e-09!604;UBERON:0006598!3.93e-09!604;UBERON:0002532!3.93e-09!604;UBERON:0000922!9.28e-09!612 | |ontology_enrichment_uberon=UBERON:0000468!2.76e-14!659;UBERON:0000467!7.23e-13!625;UBERON:0000480!1.44e-12!626;UBERON:0000062!1.01e-10!511;UBERON:0000475!1.74e-09!365;UBERON:0002050!2.09e-09!605;UBERON:0005423!2.09e-09!605;UBERON:0000923!3.93e-09!604;UBERON:0005291!3.93e-09!604;UBERON:0006598!3.93e-09!604;UBERON:0002532!3.93e-09!604;UBERON:0000922!9.28e-09!612 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.80e-08,564;UBERON:0005423,1.03e-07,581;UBERON:0000923,1.71e-07,560;UBERON:0010316,1.71e-07,560;UBERON:0005291,1.71e-07,560;UBERON:0006598,1.71e-07,560;UBERON:0010317,1.71e-07,560;UBERON:0002532,1.71e-07,560;UBERON:0003102,1.82e-07,99;UBERON:0000922,2.00e-07,592 | |||
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|short_description=p4@SEMA3C | |short_description=p4@SEMA3C | ||
}} | }} |
Latest revision as of 17:24, 19 September 2015
Short description: | p4@SEMA3C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEMA3C_5end |
Coexpression cluster: | C958_Synoviocyte_Urothelial_Fibroblast_Ewing_Mallassezderived_Chondrocyte_epithelioid |
Association with transcript: | 74bp_to_ENST00000487621_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic structure | 1.80e-08 | 564 |
developing anatomical structure | 1.03e-07 | 581 |
germ layer | 1.71e-07 | 560 |
germ layer / neural crest | 1.71e-07 | 560 |
embryonic tissue | 1.71e-07 | 560 |
presumptive structure | 1.71e-07 | 560 |
germ layer / neural crest derived structure | 1.71e-07 | 560 |
epiblast (generic) | 1.71e-07 | 560 |
surface structure | 1.82e-07 | 99 |
embryo | 2.00e-07 | 592 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.07e-07 | 14 |