FFCP PHASE1:Hg19::chr7:47988099..47988115,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=168507 | |EntrezGene=168507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18053 | |HGNC=18053 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDX9 | |UniProt=Q8TDX9 | ||
|association_with_transcript=-11bp_to_ENST00000289672_5end | |association_with_transcript=-11bp_to_ENST00000289672_5end | ||
|cluster_id=chr7:47988099..47988115,- | |||
|coexpression_cluster_id=C1679 | |coexpression_cluster_id=C1679 | ||
|description=CAGE_peak_2_at_PKD1L1_5end | |description=CAGE_peak_2_at_PKD1L1_5end | ||
|id=chr7:47988099..47988115,- | |id=chr7:47988099..47988115,- | ||
|ontology_enrichment_celltype=CL:0002139!8.01e-32!24;CL:0000115!1.20e-28!35;CL:0000071!3.78e-22!18;CL:0002546!3.78e-22!18;CL:0002078!1.58e-21!44;CL:1000413!9.83e-18!9;CL:0000213!2.91e-15!57;CL:0000215!2.91e-15!57;CL:0005020!2.11e-11!6;CL:0002138!2.11e-11!6;CL:0005022!2.11e-11!6;CL:0002544!4.83e-11!6;CL:0002618!7.18e-09!3;CL:0002543!1.52e-07!6 | |ontology_enrichment_celltype=CL:0002139!8.01e-32!24;CL:0000115!1.20e-28!35;CL:0000071!3.78e-22!18;CL:0002546!3.78e-22!18;CL:0002078!1.58e-21!44;CL:1000413!9.83e-18!9;CL:0000213!2.91e-15!57;CL:0000215!2.91e-15!57;CL:0005020!2.11e-11!6;CL:0002138!2.11e-11!6;CL:0005022!2.11e-11!6;CL:0002544!4.83e-11!6;CL:0002618!7.18e-09!3;CL:0002543!1.52e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002138;9.11e-20;6!CL:0002543;5.26e-19;6!CL:0002139;1.90e-18;24!CL:0002618;2.49e-17;3!CL:0000115;5.52e-17;36!CL:0002078;2.17e-11;45!CL:0000213;1.79e-08;58!CL:0000215;1.79e-08;58!CL:0002262;1.09e-07;2!CL:1000398;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.09e-21,36;CL:0005020,1.04e-19,6;CL:0002138,1.04e-19,6;CL:0005022,1.04e-19,6;CL:0002543,7.17e-19,6;CL:0002139,2.36e-18,24;CL:0002618,2.95e-17,3;CL:0002078,5.60e-17,45;CL:0000213,5.34e-13,58;CL:0000215,5.34e-13,58;CL:0002262,9.87e-08,2;CL:1000398,9.87e-08,2 | |||
|ontology_enrichment_development_v019=CL:0005022;9.11e-20;6!UBERON:0010227;6.23e-14;1!UBERON:0005062;1.77e-13;4!UBERON:0007284;1.77e-13;4!UBERON:0008814;1.87e-07;2!UBERON:0010056;1.87e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.78e-22!18;UBERON:0004638!3.78e-22!18;UBERON:0004852!3.78e-22!18;UBERON:0003915!9.83e-18!9;UBERON:0004700!9.83e-18!9;UBERON:0001917!9.83e-18!9;UBERON:0000487!1.67e-17!22;UBERON:0006914!5.29e-15!25;UBERON:0000055!2.26e-14!69;UBERON:0007023!1.77e-13!115;UBERON:0002049!9.10e-12!79;UBERON:0007798!9.10e-12!79;UBERON:0001009!5.52e-11!113;UBERON:0001981!8.64e-10!60;UBERON:0007500!8.64e-10!60;UBERON:0004537!8.64e-10!60;UBERON:0006965!8.64e-10!60;UBERON:0004535!1.74e-09!110;UBERON:0004111!2.51e-09!241;UBERON:0003978!3.51e-09!3;UBERON:0009751!3.51e-09!3;UBERON:0000946!3.51e-09!3;UBERON:0002523!3.51e-09!3;UBERON:0005983!3.51e-09!3;UBERON:0002165!3.51e-09!3;UBERON:0002062!3.51e-09!3;UBERON:0007280!3.51e-09!3;UBERON:0002465!3.74e-09!10;UBERON:0004151!6.81e-09!3;UBERON:0004872!1.58e-08!84;UBERON:0001473!1.98e-08!8;UBERON:0004536!1.98e-08!8;UBERON:0006558!1.98e-08!8;UBERON:0000477!8.13e-08!286;UBERON:0003103!6.01e-07!69;UBERON:0003914!8.84e-07!118 | |ontology_enrichment_uberon=UBERON:0001986!3.78e-22!18;UBERON:0004638!3.78e-22!18;UBERON:0004852!3.78e-22!18;UBERON:0003915!9.83e-18!9;UBERON:0004700!9.83e-18!9;UBERON:0001917!9.83e-18!9;UBERON:0000487!1.67e-17!22;UBERON:0006914!5.29e-15!25;UBERON:0000055!2.26e-14!69;UBERON:0007023!1.77e-13!115;UBERON:0002049!9.10e-12!79;UBERON:0007798!9.10e-12!79;UBERON:0001009!5.52e-11!113;UBERON:0001981!8.64e-10!60;UBERON:0007500!8.64e-10!60;UBERON:0004537!8.64e-10!60;UBERON:0006965!8.64e-10!60;UBERON:0004535!1.74e-09!110;UBERON:0004111!2.51e-09!241;UBERON:0003978!3.51e-09!3;UBERON:0009751!3.51e-09!3;UBERON:0000946!3.51e-09!3;UBERON:0002523!3.51e-09!3;UBERON:0005983!3.51e-09!3;UBERON:0002165!3.51e-09!3;UBERON:0002062!3.51e-09!3;UBERON:0007280!3.51e-09!3;UBERON:0002465!3.74e-09!10;UBERON:0004151!6.81e-09!3;UBERON:0004872!1.58e-08!84;UBERON:0001473!1.98e-08!8;UBERON:0004536!1.98e-08!8;UBERON:0006558!1.98e-08!8;UBERON:0000477!8.13e-08!286;UBERON:0003103!6.01e-07!69;UBERON:0003914!8.84e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.23e-17;3!UBERON:0000946;1.23e-17;3!UBERON:0001723;2.49e-17;3!UBERON:0001033;2.49e-17;3!UBERON:0001473;5.49e-15;8!UBERON:0004536;5.49e-15;8!UBERON:0006558;5.49e-15;8!UBERON:0002135;4.25e-14;1!UBERON:0002079;6.23e-14;1!UBERON:0002146;1.25e-13;1!UBERON:0002171;1.25e-13;1!UBERON:0005623;1.25e-13;1!UBERON:0006518;1.25e-13;1!UBERON:0008949;1.25e-13;1!UBERON:0000101;1.25e-13;1!UBERON:0002167;1.25e-13;1!UBERON:0001638;6.93e-13;9!UBERON:0003920;6.93e-13;9!UBERON:0004582;6.93e-13;9!UBERON:0002465;4.15e-12;10!UBERON:0002066;8.71e-11;5!UBERON:0001281;1.09e-07;2!UBERON:0003497;1.09e-07;2!UBERON:0003909;1.09e-07;2!UBERON:0002133;1.09e-07;2!UBERON:0003835;1.09e-07;2!UBERON:0002081;1.32e-07;2!UBERON:0000341;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.08e-17,3;UBERON:0009751,1.08e-17,3;UBERON:0000946,1.08e-17,3;UBERON:0002523,1.08e-17,3;UBERON:0005983,1.08e-17,3;UBERON:0002165,1.08e-17,3;UBERON:0002062,1.08e-17,3;UBERON:0007280,1.08e-17,3;UBERON:0001723,1.39e-17,3;UBERON:0001033,1.39e-17,3;UBERON:0010056,1.39e-17,3;UBERON:0001473,6.04e-15,8;UBERON:0004536,6.04e-15,8;UBERON:0006558,6.04e-15,8;UBERON:0002135,3.98e-14,1;UBERON:0002079,6.65e-14,1;UBERON:0000055,7.03e-14,68;UBERON:0002171,9.73e-14,1;UBERON:0006518,9.73e-14,1;UBERON:0008949,9.73e-14,1;UBERON:0000101,9.73e-14,1;UBERON:0002167,9.73e-14,1;UBERON:0002146,1.10e-13,1;UBERON:0005623,1.10e-13,1;UBERON:0001638,8.50e-13,9;UBERON:0003920,8.50e-13,9;UBERON:0004582,8.50e-13,9;UBERON:0002465,4.47e-12,10;UBERON:0002049,5.70e-12,78;UBERON:0007798,5.70e-12,78;UBERON:0002066,9.62e-11,5;UBERON:0004535,2.87e-10,109;UBERON:0001009,5.85e-10,112;UBERON:0004111,1.95e-08,240;UBERON:0004797,4.12e-08,7;UBERON:0001281,9.87e-08,2;UBERON:0003497,9.87e-08,2;UBERON:0003909,9.87e-08,2;UBERON:0003835,9.87e-08,2;UBERON:0002133,1.05e-07,2;UBERON:0002081,1.36e-07,2;UBERON:0010227,1.36e-07,2;UBERON:0000341,2.40e-07,2;UBERON:0007500,3.07e-07,59;UBERON:0001981,3.07e-07,59;UBERON:0004537,3.07e-07,59;UBERON:0006965,3.07e-07,59;UBERON:0004872,9.59e-07,83 | |||
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|short_description=p2@PKD1L1 | |short_description=p2@PKD1L1 | ||
}} | }} |
Latest revision as of 21:36, 18 September 2015
Short description: | p2@PKD1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKD1L1_5end |
Coexpression cluster: | C1679_Endothelial_retina_Hepatic_lung_Renal_kidney_gall |
Association with transcript: | -11bp_to_ENST00000289672_5end |
EntrezGene: | PKD1L1 |
HGNC: | 18053 |
UniProt: | Q8TDX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.09e-21 | 36 |
lymphangioblast | 1.04e-19 | 6 |
endothelial cell of lymphatic vessel | 1.04e-19 | 6 |
vascular lymphangioblast | 1.04e-19 | 6 |
vein endothelial cell | 7.17e-19 | 6 |
endothelial cell of vascular tree | 2.36e-18 | 24 |
endothelial cell of umbilical vein | 2.95e-17 | 3 |
meso-epithelial cell | 5.60e-17 | 45 |
lining cell | 5.34e-13 | 58 |
barrier cell | 5.34e-13 | 58 |
endothelial cell of sinusoid | 9.87e-08 | 2 |
endothelial cell of hepatic sinusoid | 9.87e-08 | 2 |