FFCP PHASE1:Hg19::chr7:34797894..34797905,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404744 | |EntrezGene=404744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000358772,ENST00000439852,ENST00000537560,ENST00000544556,NR_033664,NR_033665,uc003teb.1,uc010kwo.1,uc010kwp.1_5end | |association_with_transcript=-10bp_to_ENST00000358772,ENST00000439852,ENST00000537560,ENST00000544556,NR_033664,NR_033665,uc003teb.1,uc010kwo.1,uc010kwp.1_5end | ||
|cluster_id=chr7:34797894..34797905,- | |||
|coexpression_cluster_id=C1140 | |coexpression_cluster_id=C1140 | ||
|description=CAGE_peak_3_at_AAA1_5end | |description=CAGE_peak_3_at_AAA1_5end | ||
|id=chr7:34797894..34797905,- | |id=chr7:34797894..34797905,- | ||
|ontology_enrichment_celltype=CL:0000181!1.72e-11!12;CL:0000417!1.72e-11!12;CL:0000668!1.72e-11!12;CL:0000414!1.72e-11!12;CL:0000412!1.72e-11!12;CL:0000182!1.72e-11!12 | |ontology_enrichment_celltype=CL:0000181!1.72e-11!12;CL:0000417!1.72e-11!12;CL:0000668!1.72e-11!12;CL:0000414!1.72e-11!12;CL:0000412!1.72e-11!12;CL:0000182!1.72e-11!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.68e-17;12!CL:0000945;5.50e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-17,12;CL:0000945,5.73e-09,24;CL:0000826,5.73e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.40e-19;11!UBERON:0009497;5.02e-16;13!UBERON:0001041;2.63e-07;30!UBERON:0003104;5.88e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.87e-07!19;UBERON:0006925!1.87e-07!19;UBERON:0008836!1.87e-07!19 | |ontology_enrichment_uberon=UBERON:0002107!1.87e-07!19;UBERON:0006925!1.87e-07!19;UBERON:0008836!1.87e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.48e-11;19!UBERON:0006925;3.48e-11;19!UBERON:0002423;1.19e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.31e-11,19;UBERON:0006925,3.31e-11,19;UBERON:0008836,3.31e-11,19;UBERON:0008835,9.12e-10,22;UBERON:0003894,9.12e-10,22;UBERON:0009854,2.28e-09,23;UBERON:0007499,1.14e-08,25;UBERON:0009497,1.14e-08,25;UBERON:0000015,1.14e-08,25;UBERON:0002423,1.14e-08,25;UBERON:0006235,1.14e-08,25;UBERON:0004161,1.14e-08,25;UBERON:0009856,2.34e-08,26;UBERON:0002365,4.21e-07,31;UBERON:0002330,4.21e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,3.36612416744778,2.99100968991981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46646002151784,2.22522817629149,3.97680908739691,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,3.36612416744778,2.99100968991981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46646002151784,2.22522817629149,3.97680908739691,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@AAA1 | |short_description=p3@AAA1 | ||
}} | }} |
Latest revision as of 08:48, 18 September 2015
Short description: | p3@AAA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AAA1_5end |
Coexpression cluster: | C1140_hepatocellular_B_small_gastrointestinal_argyrophil_liver_temporal |
Association with transcript: | -10bp_to_ENST00000358772, ENST00000439852, ENST00000537560, ENST00000544556, NR_033664, NR_033665, uc003teb.1, uc010kwo.1, uc010kwp.1_5end |
EntrezGene: | AAA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-17 | 12 |
lymphocyte of B lineage | 5.73e-09 | 24 |
pro-B cell | 5.73e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
liver | 3.31e-11 | 19 |
digestive gland | 3.31e-11 | 19 |
liver bud | 3.31e-11 | 19 |
hepatic diverticulum | 9.12e-10 | 22 |
liver primordium | 9.12e-10 | 22 |
digestive tract diverticulum | 2.28e-09 | 23 |
epithelial sac | 1.14e-08 | 25 |
epithelium of foregut-midgut junction | 1.14e-08 | 25 |
anatomical boundary | 1.14e-08 | 25 |
hepatobiliary system | 1.14e-08 | 25 |
foregut-midgut junction | 1.14e-08 | 25 |
septum transversum | 1.14e-08 | 25 |
sac | 2.34e-08 | 26 |
exocrine gland | 4.21e-07 | 31 |
exocrine system | 4.21e-07 | 31 |