FFCP PHASE1:Hg19::chr7:130791254..130791306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:130791254..130791306,+ | |||
|coexpression_cluster_id=C1348 | |coexpression_cluster_id=C1348 | ||
|description=CAGE_peak_at_chr7:130791254..130791306,+ | |description=CAGE_peak_at_chr7:130791254..130791306,+ | ||
|id=chr7:130791254..130791306,+ | |id=chr7:130791254..130791306,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.93e-30!140;CL:0002057!1.10e-24!42;CL:0000860!3.48e-23!45;CL:0002031!3.24e-22!124;CL:0002087!1.92e-21!119;CL:0000766!1.31e-19!76;CL:0000037!1.70e-15!172;CL:0000566!1.70e-15!172;CL:0000557!1.93e-15!71;CL:0000988!5.14e-15!182;CL:0002009!6.83e-14!65;CL:0000839!8.53e-14!70;CL:0002032!2.05e-13!165;CL:0000837!2.05e-13!165;CL:0002194!5.92e-13!63;CL:0000576!5.92e-13!63;CL:0000040!5.92e-13!63;CL:0000559!5.92e-13!63;CL:0002320!3.88e-08!365;CL:0000838!5.79e-08!52;CL:0000134!1.03e-07!358;CL:0000542!1.21e-07!53;CL:0000051!1.21e-07!53;CL:0000791!6.11e-07!18;CL:0000789!6.11e-07!18;CL:0002420!6.11e-07!18;CL:0002419!6.11e-07!18;CL:0000790!6.11e-07!18;CL:0000763!7.42e-07!112;CL:0000049!7.42e-07!112 | |ontology_enrichment_celltype=CL:0000738!8.93e-30!140;CL:0002057!1.10e-24!42;CL:0000860!3.48e-23!45;CL:0002031!3.24e-22!124;CL:0002087!1.92e-21!119;CL:0000766!1.31e-19!76;CL:0000037!1.70e-15!172;CL:0000566!1.70e-15!172;CL:0000557!1.93e-15!71;CL:0000988!5.14e-15!182;CL:0002009!6.83e-14!65;CL:0000839!8.53e-14!70;CL:0002032!2.05e-13!165;CL:0000837!2.05e-13!165;CL:0002194!5.92e-13!63;CL:0000576!5.92e-13!63;CL:0000040!5.92e-13!63;CL:0000559!5.92e-13!63;CL:0002320!3.88e-08!365;CL:0000838!5.79e-08!52;CL:0000134!1.03e-07!358;CL:0000542!1.21e-07!53;CL:0000051!1.21e-07!53;CL:0000791!6.11e-07!18;CL:0000789!6.11e-07!18;CL:0002420!6.11e-07!18;CL:0002419!6.11e-07!18;CL:0000790!6.11e-07!18;CL:0000763!7.42e-07!112;CL:0000049!7.42e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-24;33!CL:0002057;2.06e-24;33!CL:0000576;1.51e-16;48!CL:0000473;2.26e-16;39!CL:0000234;2.26e-16;39!CL:0000766;1.38e-14;69!CL:0002087;7.11e-10;104!CL:0000094;2.27e-08;8!CL:0000738;5.52e-08;136!CL:0000081;9.06e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.01e-34,136;CL:0000860,9.33e-33,42;CL:0002057,9.33e-33,42;CL:0000766,8.07e-29,72;CL:0000473,1.78e-27,48;CL:0000234,1.78e-27,48;CL:0002031,4.66e-27,120;CL:0002087,2.60e-25,115;CL:0000557,2.89e-23,67;CL:0000988,9.82e-22,177;CL:0000037,1.25e-21,168;CL:0000839,2.99e-21,66;CL:0002009,1.04e-20,61;CL:0002194,2.29e-19,59;CL:0000576,2.29e-19,59;CL:0000040,2.29e-19,59;CL:0000559,2.29e-19,59;CL:0002032,6.49e-19,161;CL:0000837,6.49e-19,161;CL:0000763,3.89e-13,108;CL:0000049,3.89e-13,108;CL:0002320,1.43e-08,361;CL:0000134,2.43e-08,354;CL:0000094,2.54e-08,8;CL:0002393,1.58e-07,9;CL:0002397,1.58e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.81e-24;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.29e-20!102;UBERON:0003061!2.29e-20!102;UBERON:0002193!1.92e-18!112;UBERON:0007023!3.76e-18!115;UBERON:0002371!1.41e-14!80;UBERON:0001474!8.30e-13!86;UBERON:0004765!3.02e-10!101;UBERON:0001434!3.02e-10!101;UBERON:0000178!3.61e-08!15;UBERON:0000179!3.61e-08!15;UBERON:0000463!3.61e-08!15;UBERON:0002405!7.26e-08!115;UBERON:0002384!1.43e-07!375;UBERON:0003081!2.12e-07!216;UBERON:0001049!4.19e-07!57;UBERON:0005068!4.19e-07!57;UBERON:0006241!4.19e-07!57;UBERON:0007135!4.19e-07!57 | |ontology_enrichment_uberon=UBERON:0002390!2.29e-20!102;UBERON:0003061!2.29e-20!102;UBERON:0002193!1.92e-18!112;UBERON:0007023!3.76e-18!115;UBERON:0002371!1.41e-14!80;UBERON:0001474!8.30e-13!86;UBERON:0004765!3.02e-10!101;UBERON:0001434!3.02e-10!101;UBERON:0000178!3.61e-08!15;UBERON:0000179!3.61e-08!15;UBERON:0000463!3.61e-08!15;UBERON:0002405!7.26e-08!115;UBERON:0002384!1.43e-07!375;UBERON:0003081!2.12e-07!216;UBERON:0001049!4.19e-07!57;UBERON:0005068!4.19e-07!57;UBERON:0006241!4.19e-07!57;UBERON:0007135!4.19e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.48e-10;15!UBERON:0000179;2.48e-10;15!UBERON:0000463;2.48e-10;15 | |||
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|phase1_expression=0.726713517082227,1.49870366723688,1.12763523276777,0,3.12872766099101,0,0,1.26343974685366,1.04474251279935,0.491467873003018,0,0,0.263766978228454,0.247532705920093,1.98838425436749,0,0.602694528023977,0.730310090387373,0.975865597581014,0.738726348460727,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0.764134057479513,0.246301768349837,0.236132343941038,11.8009283054671,7.29275856384704,21.5194411409346,0.919421224478927,0.30120591877825,0,0.774672005803016,0.284338464974843,2.05520307534393,9.41792194504192,17.4473669299023,14.9737500793938,0.223915474239924,0.971680998056939,0.257575567634187,6.54292074508041,8.69114670484262,8.73302620276138,12.7835970298127,16.446715520873,16.7241440283356,23.3030837780942,14.3449995656296,11.1146648047635,14.1345729102014,18.719055823931,24.3767675869815,12.0475097307267,9.00590295190891,8.7642158933583,16.2224462956578,7.06043859567406,30.688182038354,7.91643120448119,8.37747362010854,8.52449501065388,6.67481248845743,9.64554881974938,13.0792672289071,22.8636285383636,17.7304192262868,12.5969529928968,6.05399502633369,5.89244217580104,7.91155968602211,5.91514801673437,7.44115049877652,6.49941801075965,12.8054639507004,9.31096735617339,5.6253955343978,6.27028036230747,4.17725022118089,2.37463399894024,3.51992488922645,1.09227722252426,2.66852776159066,2.98711155796555,1.20118796110804,1.72425731986345,2.64417949113945,0.954053754535364,34.7219911156764,28.1873850898051,32.8754976187697,3.96513985737078,4.48406850385229,1.58030450865046,11.9992959769438,15.7204305099666,24.6721798799411,1.67186495390678,16.2961133316795,3.78758244587787,11.6896037044747,3.34231370655521,30.0498025624334,20.3811183016931,9.74893909554056,1.0247305578054,2.60118695119756,0.822189523018381,1.65810010671509,1.73881851441031,13.7906503740716,10.1665514674091,5.22677619024884,2.03956816855619,6.13152789763074,5.84166657320471,5.56643322442906,1.27426165729639,0.651083453856419,0.950452044448374,1.35517607169996,1.27986611154418,2.49861453104692,1.89421801635213,0.821127996921047,26.4104833624399,32.6277038855879,23.6063778328962,2.43806866313962,0,0,0,0.50133791063589,0.144846518960824,0,2.91980922181582,0,0,0.263504357079378,1.24430121722827,0,0.741568885568859,0.324547393654683,0.348259474598534,0.26591592103773,10.9705687180457,4.0039643754609,8.17206502925043,0.198762407366705,0,0,1.13061588384802,0,0.825354125820202,0.835979866147242,0.775250277507987,0,0,0.805658634218294,0.760272105718513,1.22031028774085,0,0,0,0.22452937262617,0.112611480483322,0,0,0,19.7670626154095,15.511210565933,0.436094052142534,0.496971951695318,0.12663051166458,1.98613771219828,2.29469296599051,0.709336764396714,0,1.06748995729705,0,0,0.269421344139376,0.490385709340376,0.302714855289863,0.576175924479999,0,0.936480230490962,0,0.149448680551801,0.352303495931295,0.647491777472526,0.561803226808994,0.408308342509787,0,0.413303124703062,0,0.247266929278557,2.73048408581408,1.43723628363248,0.336672227908132,0,0.277064115484183,0.438977620880838,0.612975591598039,0.600952235626387,0.453728732640084,1.79389635688862,0.213557388818567,0.847727604638247,1.50045548042201,0.92747276314595,0.515281080091258,0.18611685633159,1.18143432568886,0.292311015483596,1.51460264546469,0.644349290496095,0.484938170456436,1.06502877754984,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.28648187638577,2.76269842704961,2.3218396401599,2.16563844500876,0.591534000199219,0.337169380156203,0.723033089650446,0,0.653638332277218,0,1.21348177344148,0.392442930250692,0,0,0,0,0,0,0,1.77236972004421,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,4.15973914111831,0,0,0.234817388471643,0.721832238805369,0,0.380508304469197,1.58040879591855,0.858486162094873,0.246217006087397,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,2.46331618947972,2.64145302039678,29.0259361757081,15.7090749224488,26.0059412858343,0.571481048629521,1.52795370223311,3.51652341630141,0,0.205654985406647,0.901029173531752,0.571652865261156,0.336393253036082,0,0,0.387815147273333,3.57656445851882,0.845302752556,0.531876233169741,1.04007436911366,0.257207374262142,0,0.532844358032199,1.57275793023962,1.08524321078289,0,0.977208552881205,0,1.58390374586686,0.904318131178758,0,0.199945982364114,0,0,2.10833939483032,0.718874566474748,0,0,0.289562613335158,0.61642896765115,0.537182889719687,0.672510863961164,30.5397678312987,32.9910189535061,36.8344514122878,0.76228387266739,0,0,0.335032530668698,0.637938751653163,54.6775127481443,38.8909896965232,103.189462845573,0.613457458595699,1.50051156317903,0.542530047399471,0.623912584592421,0.356857977594324,0.630809660135739,0.35142424497814,0.601892199455438,0,0,0,0,0.260650843404249,1.37060810223918,1.02943027143257,14.4737618286021,27.1799893031457,15.9024061127132,0,1.66435439510497,0,0.744323423456331,0.61384789315225,0.56132018886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| ||
|short_description=p@chr7:130791254..130791306,+ | |short_description=p@chr7:130791254..130791306,+ | ||
}} | }} |
Latest revision as of 06:08, 31 July 2015
Short description: | p@chr7:130791254..130791306, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:130791254..130791306, + |
Coexpression cluster: | C1348_Neutrophils_Natural_CD8_Mast_CD19_CD4_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.01e-34 | 136 |
classical monocyte | 9.33e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.33e-33 | 42 |
myeloid leukocyte | 8.07e-29 | 72 |
defensive cell | 1.78e-27 | 48 |
phagocyte | 1.78e-27 | 48 |
hematopoietic lineage restricted progenitor cell | 4.66e-27 | 120 |
nongranular leukocyte | 2.60e-25 | 115 |
granulocyte monocyte progenitor cell | 2.89e-23 | 67 |
hematopoietic cell | 9.82e-22 | 177 |
hematopoietic stem cell | 1.25e-21 | 168 |
myeloid lineage restricted progenitor cell | 2.99e-21 | 66 |
macrophage dendritic cell progenitor | 1.04e-20 | 61 |
monopoietic cell | 2.29e-19 | 59 |
monocyte | 2.29e-19 | 59 |
monoblast | 2.29e-19 | 59 |
promonocyte | 2.29e-19 | 59 |
hematopoietic oligopotent progenitor cell | 6.49e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.49e-19 | 161 |
myeloid cell | 3.89e-13 | 108 |
common myeloid progenitor | 3.89e-13 | 108 |
connective tissue cell | 1.43e-08 | 361 |
mesenchymal cell | 2.43e-08 | 354 |
granulocyte | 2.54e-08 | 8 |
intermediate monocyte | 1.58e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.58e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.86e-28 | 98 |
blood island | 5.86e-28 | 98 |
hemolymphoid system | 2.39e-24 | 108 |
bone marrow | 1.95e-21 | 76 |
bone element | 3.34e-19 | 82 |
adult organism | 4.70e-18 | 114 |
skeletal element | 5.32e-17 | 90 |
immune system | 1.65e-16 | 93 |
skeletal system | 2.46e-14 | 100 |
lateral plate mesoderm | 1.19e-12 | 203 |
blood | 1.81e-10 | 15 |
haemolymphatic fluid | 1.81e-10 | 15 |
organism substance | 1.81e-10 | 15 |
connective tissue | 6.20e-08 | 371 |
neural tube | 6.37e-08 | 56 |
neural rod | 6.37e-08 | 56 |
future spinal cord | 6.37e-08 | 56 |
neural keel | 6.37e-08 | 56 |
regional part of nervous system | 1.76e-07 | 53 |
regional part of brain | 1.76e-07 | 53 |