FFCP PHASE1:Hg19::chr7:129028694..129028708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23382 | |EntrezGene=23382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22204 | |HGNC=22204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_ENST00000491079_5end | |association_with_transcript=46bp_to_ENST00000491079_5end | ||
|cluster_id=chr7:129028694..129028708,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_20_at_AHCYL2_5end | |description=CAGE_peak_20_at_AHCYL2_5end | ||
|id=chr7:129028694..129028708,+ | |id=chr7:129028694..129028708,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.17e-13!10;CL:0000541!1.17e-13!10;CL:0000147!1.12e-09!14;CL:0002605!6.05e-08!3;CL:0002566!4.33e-07!1 | |ontology_enrichment_celltype=CL:0000148!1.17e-13!10;CL:0000541!1.17e-13!10;CL:0000147!1.12e-09!14;CL:0002605!6.05e-08!3;CL:0002566!4.33e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002566;2.42e-50;1!CL:0000148;8.98e-21;10!CL:0000147;3.53e-15;14!CL:0000149;1.21e-13;4!CL:0000710;5.85e-11;20!CL:0000075;2.18e-08;27!CL:0002077;3.64e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,2.42e-50,1;CL:0000148,8.54e-21,10;CL:0000541,8.54e-21,10;CL:0000147,3.41e-15,14;CL:0000149,1.13e-13,4;CL:0000710,5.70e-11,20;CL:0000075,2.14e-08,27;CL:0002077,7.16e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.76e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000966;2.66e-11;5!UBERON:0005388;2.66e-11;5!UBERON:0001802;2.66e-11;5!UBERON:0000970;5.56e-11;20!UBERON:0002104;1.65e-10;21!UBERON:0000020;1.09e-09;23!UBERON:0001032;2.51e-09;24!UBERON:0004456;2.51e-09;24 | |||
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|short_description=p20@AHCYL2 | |short_description=p20@AHCYL2 | ||
}} | }} |
Latest revision as of 05:37, 16 September 2015
Short description: | p20@AHCYL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_AHCYL2_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 46bp_to_ENST00000491079_5end |
EntrezGene: | AHCYL2 |
HGNC: | 22204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 2.42e-50 | 1 |
melanocyte | 8.54e-21 | 10 |
melanoblast | 8.54e-21 | 10 |
pigment cell | 3.41e-15 | 14 |
visual pigment cell | 1.13e-13 | 4 |
neurecto-epithelial cell | 5.70e-11 | 20 |
columnar/cuboidal epithelial cell | 2.14e-08 | 27 |
ecto-epithelial cell | 7.16e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
eye | 1.69e-10 | 21 |
visual system | 1.69e-10 | 21 |
retina | 1.22e-09 | 6 |
photoreceptor array | 1.22e-09 | 6 |
posterior segment of eyeball | 1.22e-09 | 6 |
sense organ | 2.56e-09 | 24 |
sensory system | 2.56e-09 | 24 |
entire sense organ system | 2.56e-09 | 24 |