FFCP PHASE1:Hg19::chr7:120099066..120099074,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:120099066..120099074,+ | |||
|coexpression_cluster_id=C710 | |coexpression_cluster_id=C710 | ||
|description=CAGE_peak_at_chr7:120099066..120099074,+ | |description=CAGE_peak_at_chr7:120099066..120099074,+ | ||
|id=chr7:120099066..120099074,+ | |id=chr7:120099066..120099074,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.00e-10;1!CL:0002553;3.00e-10;1!CL:0000786;3.00e-10;1!CL:0000945;2.18e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.50e-10,1;CL:0000946,3.01e-10,1;CL:0000786,3.01e-10,1;CL:0000980,3.01e-10,1;CL:0000945,2.01e-09,24;CL:0000826,2.01e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.42e-29;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.11e-49!57;UBERON:0005068!1.11e-49!57;UBERON:0006241!1.11e-49!57;UBERON:0007135!1.11e-49!57;UBERON:0002616!2.69e-42!59;UBERON:0001017!9.75e-38!82;UBERON:0002780!4.32e-36!41;UBERON:0001890!4.32e-36!41;UBERON:0006240!4.32e-36!41;UBERON:0005743!2.11e-35!86;UBERON:0003080!4.93e-35!42;UBERON:0000955!7.18e-34!69;UBERON:0006238!7.18e-34!69;UBERON:0002020!5.34e-33!34;UBERON:0003528!5.34e-33!34;UBERON:0000073!2.07e-32!94;UBERON:0001016!2.07e-32!94;UBERON:0002346!2.32e-30!90;UBERON:0001893!5.95e-30!34;UBERON:0001869!1.69e-29!32;UBERON:0003075!6.54e-29!86;UBERON:0007284!6.54e-29!86;UBERON:0002791!1.64e-28!33;UBERON:0002619!3.38e-24!22;UBERON:0001950!7.09e-24!20;UBERON:0003056!1.67e-21!61;UBERON:0000956!8.33e-21!25;UBERON:0000203!8.33e-21!25;UBERON:0007023!2.68e-17!115;UBERON:0000924!1.40e-15!173;UBERON:0006601!1.40e-15!173;UBERON:0003076!2.15e-15!15;UBERON:0003057!2.15e-15!15;UBERON:0000033!2.78e-15!123;UBERON:0004121!1.81e-14!169;UBERON:0002308!2.95e-14!9;UBERON:0000125!2.95e-14!9;UBERON:0000153!4.40e-14!129;UBERON:0007811!4.40e-14!129;UBERON:0002420!5.80e-14!9;UBERON:0007245!5.80e-14!9;UBERON:0010009!5.80e-14!9;UBERON:0010011!5.80e-14!9;UBERON:0000454!5.80e-14!9;UBERON:0009663!1.15e-10!7;UBERON:0004733!1.19e-10!12;UBERON:0002028!1.19e-10!12;UBERON:0007277!1.19e-10!12;UBERON:0002021!1.76e-10!5;UBERON:0000025!7.35e-10!194;UBERON:0004732!1.05e-09!13;UBERON:0000369!4.64e-09!4;UBERON:0002435!4.64e-09!4;UBERON:0000204!4.64e-09!4;UBERON:0010082!4.64e-09!4;UBERON:0002298!7.65e-09!8;UBERON:0002680!9.92e-09!9;UBERON:0001895!9.92e-09!9;UBERON:0010092!9.92e-09!9;UBERON:0001871!1.13e-08!7;UBERON:0000200!2.10e-08!6;UBERON:0001894!1.76e-07!7;UBERON:0006222!1.76e-07!7;UBERON:0005383!1.89e-07!3;UBERON:0005382!1.89e-07!3;UBERON:0000988!3.86e-07!3;UBERON:0006331!5.72e-07!3;UBERON:0002240!7.30e-07!3;UBERON:0002771!9.89e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.11e-49!57;UBERON:0005068!1.11e-49!57;UBERON:0006241!1.11e-49!57;UBERON:0007135!1.11e-49!57;UBERON:0002616!2.69e-42!59;UBERON:0001017!9.75e-38!82;UBERON:0002780!4.32e-36!41;UBERON:0001890!4.32e-36!41;UBERON:0006240!4.32e-36!41;UBERON:0005743!2.11e-35!86;UBERON:0003080!4.93e-35!42;UBERON:0000955!7.18e-34!69;UBERON:0006238!7.18e-34!69;UBERON:0002020!5.34e-33!34;UBERON:0003528!5.34e-33!34;UBERON:0000073!2.07e-32!94;UBERON:0001016!2.07e-32!94;UBERON:0002346!2.32e-30!90;UBERON:0001893!5.95e-30!34;UBERON:0001869!1.69e-29!32;UBERON:0003075!6.54e-29!86;UBERON:0007284!6.54e-29!86;UBERON:0002791!1.64e-28!33;UBERON:0002619!3.38e-24!22;UBERON:0001950!7.09e-24!20;UBERON:0003056!1.67e-21!61;UBERON:0000956!8.33e-21!25;UBERON:0000203!8.33e-21!25;UBERON:0007023!2.68e-17!115;UBERON:0000924!1.40e-15!173;UBERON:0006601!1.40e-15!173;UBERON:0003076!2.15e-15!15;UBERON:0003057!2.15e-15!15;UBERON:0000033!2.78e-15!123;UBERON:0004121!1.81e-14!169;UBERON:0002308!2.95e-14!9;UBERON:0000125!2.95e-14!9;UBERON:0000153!4.40e-14!129;UBERON:0007811!4.40e-14!129;UBERON:0002420!5.80e-14!9;UBERON:0007245!5.80e-14!9;UBERON:0010009!5.80e-14!9;UBERON:0010011!5.80e-14!9;UBERON:0000454!5.80e-14!9;UBERON:0009663!1.15e-10!7;UBERON:0004733!1.19e-10!12;UBERON:0002028!1.19e-10!12;UBERON:0007277!1.19e-10!12;UBERON:0002021!1.76e-10!5;UBERON:0000025!7.35e-10!194;UBERON:0004732!1.05e-09!13;UBERON:0000369!4.64e-09!4;UBERON:0002435!4.64e-09!4;UBERON:0000204!4.64e-09!4;UBERON:0010082!4.64e-09!4;UBERON:0002298!7.65e-09!8;UBERON:0002680!9.92e-09!9;UBERON:0001895!9.92e-09!9;UBERON:0010092!9.92e-09!9;UBERON:0001871!1.13e-08!7;UBERON:0000200!2.10e-08!6;UBERON:0001894!1.76e-07!7;UBERON:0006222!1.76e-07!7;UBERON:0005383!1.89e-07!3;UBERON:0005382!1.89e-07!3;UBERON:0000988!3.86e-07!3;UBERON:0006331!5.72e-07!3;UBERON:0002240!7.30e-07!3;UBERON:0002771!9.89e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.93e-15;6!UBERON:0004733;1.21e-12;12!UBERON:0002028;1.21e-12;12!UBERON:0004732;1.10e-11;13!UBERON:0002680;5.01e-10;9!UBERON:0001895;5.01e-10;9!UBERON:0000073;2.29e-08;53!UBERON:0002616;2.29e-08;53!UBERON:0002021;3.71e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.15e-15,6;UBERON:0006215,9.15e-15,6;UBERON:0004733,1.20e-12,12;UBERON:0002028,1.20e-12,12;UBERON:0007277,1.20e-12,12;UBERON:0000073,1.95e-12,53;UBERON:0002616,1.95e-12,53;UBERON:0001049,1.03e-11,56;UBERON:0005068,1.03e-11,56;UBERON:0006241,1.03e-11,56;UBERON:0007135,1.03e-11,56;UBERON:0004732,1.09e-11,13;UBERON:0003076,3.73e-10,15;UBERON:0003057,3.73e-10,15;UBERON:0002680,5.09e-10,9;UBERON:0001895,5.09e-10,9;UBERON:0010092,5.09e-10,9;UBERON:0000955,2.64e-09,68;UBERON:0006238,2.64e-09,68;UBERON:0002021,4.07e-08,5;UBERON:0001017,1.20e-07,81;UBERON:0003075,1.20e-07,82;UBERON:0007284,1.20e-07,82;UBERON:0002346,3.08e-07,86;UBERON:0010371,3.46e-07,104;UBERON:0001016,8.92e-07,89 | |||
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|short_description=p@chr7:120099066..120099074,+ | |short_description=p@chr7:120099066..120099074,+ | ||
}} | }} |
Latest revision as of 05:26, 31 July 2015
Short description: | p@chr7:120099066..120099074, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:120099066..120099074, + |
Coexpression cluster: | C710_anaplastic_cerebellum_xeroderma_B_carcinoid_merkel_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.50e-10 | 1 |
antibody secreting cell | 3.01e-10 | 1 |
plasma cell | 3.01e-10 | 1 |
plasmablast | 3.01e-10 | 1 |
lymphocyte of B lineage | 2.01e-09 | 24 |
pro-B cell | 2.01e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.15e-15 | 6 |
rhombic lip | 9.15e-15 | 6 |
segmental subdivision of hindbrain | 1.20e-12 | 12 |
hindbrain | 1.20e-12 | 12 |
presumptive hindbrain | 1.20e-12 | 12 |
regional part of nervous system | 1.95e-12 | 53 |
regional part of brain | 1.95e-12 | 53 |
neural tube | 1.03e-11 | 56 |
neural rod | 1.03e-11 | 56 |
future spinal cord | 1.03e-11 | 56 |
neural keel | 1.03e-11 | 56 |
segmental subdivision of nervous system | 1.09e-11 | 13 |
posterior neural tube | 3.73e-10 | 15 |
chordal neural plate | 3.73e-10 | 15 |
regional part of metencephalon | 5.09e-10 | 9 |
metencephalon | 5.09e-10 | 9 |
future metencephalon | 5.09e-10 | 9 |
brain | 2.64e-09 | 68 |
future brain | 2.64e-09 | 68 |
occipital lobe | 4.07e-08 | 5 |
central nervous system | 1.20e-07 | 81 |
neural plate | 1.20e-07 | 82 |
presumptive neural plate | 1.20e-07 | 82 |
neurectoderm | 3.08e-07 | 86 |
ecto-epithelium | 3.46e-07 | 104 |
nervous system | 8.92e-07 | 89 |