FFCP PHASE1:Hg19::chr19:42580012..42580019,-: Difference between revisions
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|id=chr19:42580012..42580019,-
|short_description=p@chr19:42580012..42580019,-
|description=CAGE_peak_at_chr19:42580012..42580019,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:42580012..42580019,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr19:42580012..42580019,- | |||
|id=chr19:42580012..42580019,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.44e-09;4!CL:0002222;1.44e-09;4!CL:0002224;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.44e-09,4;CL:0002222,1.44e-09,4;CL:0002224,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.47e-14;10!UBERON:0005564;3.47e-14;10 | |||
|ontology_enrichment_disease=DOID:3905!8.28e-07!9 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!8.31e-07!4;UBERON:0010133!8.31e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.85e-17;8!UBERON:0003135;5.42e-13;11!UBERON:0010077;1.44e-09;4!UBERON:0005389;1.44e-09;4!UBERON:0000484;1.44e-09;4!UBERON:0000965;1.44e-09;4!UBERON:0001803;1.44e-09;4!UBERON:0000991;2.86e-07;21!UBERON:0003101;5.57e-07;22!UBERON:0000079;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.85e-17,8;UBERON:0003135,5.42e-13,11;UBERON:0010077,1.44e-09,4;UBERON:0005389,1.44e-09,4;UBERON:0000484,1.44e-09,4;UBERON:0002546,1.44e-09,4;UBERON:0000965,1.44e-09,4;UBERON:0001803,1.44e-09,4;UBERON:0003073,1.44e-09,4;UBERON:0005426,1.44e-09,4;UBERON:0000991,2.86e-07,21;UBERON:0009196,2.86e-07,21;UBERON:0009117,2.86e-07,21;UBERON:0005564,2.86e-07,21;UBERON:0004176,5.57e-07,22;UBERON:0003101,5.57e-07,22;UBERON:0000079,5.57e-07,22 | |||
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| ||
|short_description=p@chr19:42580012..42580019,- | |||
}} | }} |
Latest revision as of 08:47, 26 July 2015
Short description: | p@chr19:42580012..42580019, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42580012..42580019, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.44e-09 | 4 |
vertebrate lens cell | 1.44e-09 | 4 |
lens epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.85e-17 | 8 |
male reproductive organ | 5.42e-13 | 11 |
cuboidal epithelium | 1.44e-09 | 4 |
transparent eye structure | 1.44e-09 | 4 |
simple cuboidal epithelium | 1.44e-09 | 4 |
cranial placode | 1.44e-09 | 4 |
lens of camera-type eye | 1.44e-09 | 4 |
epithelium of lens | 1.44e-09 | 4 |
lens placode | 1.44e-09 | 4 |
lens vesicle | 1.44e-09 | 4 |
gonad | 2.86e-07 | 21 |
indifferent external genitalia | 2.86e-07 | 21 |
indifferent gonad | 2.86e-07 | 21 |
gonad primordium | 2.86e-07 | 21 |
external genitalia | 5.57e-07 | 22 |
male organism | 5.57e-07 | 22 |
male reproductive system | 5.57e-07 | 22 |