FFCP PHASE1:Hg19::chr6:7578714..7578725,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:7578714..7578725,+ | |||
|coexpression_cluster_id=C324 | |coexpression_cluster_id=C324 | ||
|description=CAGE_peak_at_chr6:7578714..7578725,+ | |description=CAGE_peak_at_chr6:7578714..7578725,+ | ||
|id=chr6:7578714..7578725,+ | |id=chr6:7578714..7578725,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.53e-21!254;CL:0000223!1.36e-13!59;CL:0002076!1.51e-11!43;CL:0002251!2.12e-08!21 | |ontology_enrichment_celltype=CL:0000066!4.53e-21!254;CL:0000223!1.36e-13!59;CL:0002076!1.51e-11!43;CL:0002251!2.12e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0000622;3.58e-23;5!CL:0002623;2.90e-22;3!CL:0000154;2.35e-19;6!CL:0000150;5.65e-13;9!CL:0000313;2.20e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.70e-23,5;CL:0002623,3.49e-22,3;CL:0000154,1.86e-19,6;CL:0000150,4.84e-13,9;CL:0000313,4.07e-08,1;CL:0000223,7.62e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.45e-09;1!UBERON:0009143;2.20e-08;1 | |||
|ontology_enrichment_disease=DOID:305!9.05e-22!106;DOID:0050687!2.03e-15!143;DOID:162!8.36e-07!235 | |ontology_enrichment_disease=DOID:305!9.05e-22!106;DOID:0050687!2.03e-15!143;DOID:162!8.36e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:1799;2.20e-08;1!DOID:10165;2.20e-08;1!DOID:178;2.20e-08;1!DOID:326;2.20e-08;1!DOID:3978;2.20e-08;1!DOID:3394;2.20e-08;1!DOID:2152;2.20e-08;1!DOID:5844;2.20e-08;1!DOID:1798;2.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.71e-08,1;DOID:326,1.71e-08,1;DOID:3978,1.71e-08,1;DOID:3394,1.71e-08,1;DOID:5844,1.71e-08,1;DOID:1799,2.64e-08,1;DOID:10165,2.64e-08,1;DOID:1798,2.64e-08,1;DOID:2152,4.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.77e-16!169;UBERON:0000925!2.77e-16!169;UBERON:0006595!2.77e-16!169;UBERON:0004921!7.06e-15!129;UBERON:0004185!7.06e-15!129;UBERON:0001007!5.28e-14!155;UBERON:0001555!5.28e-14!155;UBERON:0007026!5.28e-14!155;UBERON:0000077!4.11e-11!130;UBERON:0001041!5.79e-11!98;UBERON:0001004!5.91e-10!72;UBERON:0000065!2.07e-08!53;UBERON:0001557!2.12e-08!19;UBERON:0000161!3.59e-07!35;UBERON:0002530!3.63e-07!59;UBERON:0001737!7.14e-07!9 | |ontology_enrichment_uberon=UBERON:0004119!2.77e-16!169;UBERON:0000925!2.77e-16!169;UBERON:0006595!2.77e-16!169;UBERON:0004921!7.06e-15!129;UBERON:0004185!7.06e-15!129;UBERON:0001007!5.28e-14!155;UBERON:0001555!5.28e-14!155;UBERON:0007026!5.28e-14!155;UBERON:0000077!4.11e-11!130;UBERON:0001041!5.79e-11!98;UBERON:0001004!5.91e-10!72;UBERON:0000065!2.07e-08!53;UBERON:0001557!2.12e-08!19;UBERON:0000161!3.59e-07!35;UBERON:0002530!3.63e-07!59;UBERON:0001737!7.14e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.03e-11;6!UBERON:0003293;2.03e-11;6!UBERON:0003294;2.03e-11;6!UBERON:0010047;2.03e-11;6!UBERON:0003408;2.03e-11;6!UBERON:0000167;2.03e-11;6!UBERON:0001723;1.13e-10;3!UBERON:0001033;1.13e-10;3!UBERON:0000165;7.60e-09;28!UBERON:0002079;9.45e-09;1!UBERON:0001041;2.16e-08;14!UBERON:0004911;2.20e-08;1!UBERON:0002365;4.59e-08;31!UBERON:0002330;4.59e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.16e-11,22;UBERON:0001044,2.23e-11,6;UBERON:0003293,2.23e-11,6;UBERON:0003294,2.23e-11,6;UBERON:0010047,2.23e-11,6;UBERON:0000167,2.23e-11,6;UBERON:0001723,1.11e-10,3;UBERON:0001033,1.11e-10,3;UBERON:0010056,1.11e-10,3;UBERON:0000161,3.97e-09,36;UBERON:0002079,1.02e-08,1;UBERON:0000165,1.63e-08,29;UBERON:0000930,1.63e-08,29;UBERON:0004911,4.07e-08,1;UBERON:0002365,7.85e-08,31;UBERON:0002330,7.85e-08,31;UBERON:0003408,5.16e-07,10 | |||
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| ||
|short_description=p@chr6:7578714..7578725,+ | |short_description=p@chr6:7578714..7578725,+ | ||
}} | }} |
Latest revision as of 03:10, 31 July 2015
Short description: | p@chr6:7578714..7578725, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7578714..7578725, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.70e-23 | 5 |
acinar cell of salivary gland | 3.49e-22 | 3 |
protein secreting cell | 1.86e-19 | 6 |
glandular epithelial cell | 4.84e-13 | 9 |
serous secreting cell | 4.07e-08 | 1 |
endodermal cell | 7.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.16e-11 | 22 |
saliva-secreting gland | 2.23e-11 | 6 |
gland of oral region | 2.23e-11 | 6 |
gland of foregut | 2.23e-11 | 6 |
oral gland | 2.23e-11 | 6 |
oral cavity | 2.23e-11 | 6 |
tongue | 1.11e-10 | 3 |
gustatory system | 1.11e-10 | 3 |
future tongue | 1.11e-10 | 3 |
orifice | 3.97e-09 | 36 |
left cardiac atrium | 1.02e-08 | 1 |
mouth | 1.63e-08 | 29 |
stomodeum | 1.63e-08 | 29 |
epithelium of female gonad | 4.07e-08 | 1 |
exocrine gland | 7.85e-08 | 31 |
exocrine system | 7.85e-08 | 31 |
gland of gut | 5.16e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.71e-08 | 1 |
ischemia | 1.71e-08 | 1 |
extrinsic cardiomyopathy | 1.71e-08 | 1 |
myocardial ischemia | 1.71e-08 | 1 |
myocardial infarction | 1.71e-08 | 1 |
islet cell tumor | 2.64e-08 | 1 |
endocrine pancreas cancer | 2.64e-08 | 1 |
pancreatic endocrine carcinoma | 2.64e-08 | 1 |
ovary epithelial cancer | 4.07e-08 | 1 |