FFCP PHASE1:Hg19::chr19:42363917..42364010,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:42363917..42364010,+
|short_description=p4@RPS19
|description=CAGE_peak_4_at_RPS19_5end
|association_with_transcript=0bp_to_ENST00000221975,NM_001022,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6223 | |EntrezGene=6223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10402 | |HGNC=10402 | ||
|TSSclassifier=strong | |||
|UniProt=P39019,B0ZBD0 | |UniProt=P39019,B0ZBD0 | ||
|association_with_transcript=0bp_to_ENST00000221975,NM_001022,uc002ort.2_5end | |||
|cluster_id=chr19:42363917..42364010,+ | |||
|description=CAGE_peak_4_at_RPS19_5end | |||
|id=chr19:42363917..42364010,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.74e-19!679;CL:0000004!1.74e-19!679;CL:0000255!1.74e-19!679;CL:0000012!4.96e-19!682;CL:0000144!8.83e-15!625;CL:0002371!4.99e-14!591;CL:0000003!2.05e-13!722;CL:0000055!2.88e-11!180;CL:0002321!3.70e-09!248;CL:0000220!7.57e-09!246;CL:0000222!1.28e-07!119;CL:0002078!1.38e-07!44;CL:0000115!3.36e-07!35;CL:0000133!7.42e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000115;8.15e-07;36!CL:1000449;8.30e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.17e-09,250;CL:0000222,7.98e-09,121;CL:0000115,2.27e-08,36;CL:0002078,3.44e-08,45;CL:1000449,5.78e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.30e-07;15!UBERON:0004819;8.30e-07;15!UBERON:0001285;8.30e-07;15!UBERON:0007684;8.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,5.78e-07,15;UBERON:0009773,5.78e-07,15;UBERON:0001231,5.78e-07,15;UBERON:0001285,5.78e-07,15;UBERON:0007684,5.78e-07,15;UBERON:0004208,5.78e-07,15;UBERON:0007503,6.16e-07,78 | |||
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| ||
|short_description=p4@RPS19 | |||
}} | }} |
Latest revision as of 06:47, 18 September 2015
Short description: | p4@RPS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPS19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000221975, NM_001022, uc002ort.2_5end |
EntrezGene: | RPS19 |
HGNC: | 10402 |
UniProt: | P39019B0ZBD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.17e-09 | 250 |
mesodermal cell | 7.98e-09 | 121 |
endothelial cell | 2.27e-08 | 36 |
meso-epithelial cell | 3.44e-08 | 45 |
epithelial cell of nephron | 5.78e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 5.78e-07 | 15 |
renal tubule | 5.78e-07 | 15 |
nephron tubule | 5.78e-07 | 15 |
nephron | 5.78e-07 | 15 |
uriniferous tubule | 5.78e-07 | 15 |
nephrogenic mesenchyme | 5.78e-07 | 15 |
epithelial vesicle | 6.16e-07 | 78 |