FFCP PHASE1:Hg19::chr6:56484521..56484552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=667 | |EntrezGene=667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier=strong | |||
|UniProt=Q03001 | |UniProt=Q03001 | ||
|association_with_transcript=-472bp_to_X58677_5end | |association_with_transcript=-472bp_to_X58677_5end | ||
|cluster_id=chr6:56484521..56484552,- | |||
|coexpression_cluster_id=C457 | |coexpression_cluster_id=C457 | ||
|description=CAGE_peak_23_at_DST_5end | |description=CAGE_peak_23_at_DST_5end | ||
|id=chr6:56484521..56484552,- | |id=chr6:56484521..56484552,- | ||
|ontology_enrichment_celltype=CL:0000066!3.21e-11!254;CL:0000223!2.18e-07!59;CL:0002076!2.18e-07!43 | |ontology_enrichment_celltype=CL:0000066!3.21e-11!254;CL:0000223!2.18e-07!59;CL:0002076!2.18e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.59e-19;42!CL:0002251;8.14e-15;20!CL:0002623;2.75e-13;3!CL:0000240;6.87e-11;6!CL:0000311;6.87e-11;6!CL:0000079;6.87e-11;6!CL:0000237;6.87e-11;6!CL:0002159;1.44e-09;14!CL:0000622;3.99e-08;5!CL:0000312;1.30e-07;5!CL:0002368;1.76e-07;13!CL:0000154;7.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.31e-23,42;CL:0000223,6.29e-16,58;CL:0002251,8.68e-15,20;CL:0002623,2.60e-13,3;CL:0000066,1.53e-12,253;CL:0000240,7.73e-11,6;CL:0000311,7.73e-11,6;CL:0000079,7.73e-11,6;CL:0000237,7.73e-11,6;CL:0000036,7.73e-11,6;CL:0000357,7.73e-11,6;CL:0000114,7.73e-11,6;CL:0000076,4.11e-10,63;CL:0002159,1.74e-09,14;CL:0000622,3.87e-08,5;CL:0000312,1.44e-07,5;CL:0002368,1.67e-07,13;CL:0000154,7.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.87e-11;6!CL:0000114;6.87e-11;6!UBERON:0008814;1.43e-08;2!UBERON:0010056;1.43e-08;2!CL:0000223;1.78e-08;58 | |||
|ontology_enrichment_disease=DOID:305!2.03e-11!106;DOID:0050687!3.06e-11!143;DOID:1749!3.80e-09!14;DOID:14566!3.22e-08!239;DOID:162!6.76e-08!235;DOID:7!5.95e-07!39 | |ontology_enrichment_disease=DOID:305!2.03e-11!106;DOID:0050687!3.06e-11!143;DOID:1749!3.80e-09!14;DOID:14566!3.22e-08!239;DOID:162!6.76e-08!235;DOID:7!5.95e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.61e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.38e-16,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.36e-09!35;UBERON:0004121!3.17e-09!169;UBERON:0000924!6.35e-09!173;UBERON:0006601!6.35e-09!173;UBERON:0003102!1.44e-08!95;UBERON:0004119!3.93e-08!169;UBERON:0000925!3.93e-08!169;UBERON:0006595!3.93e-08!169;UBERON:0000062!5.62e-08!511;UBERON:0001007!8.29e-07!155;UBERON:0001555!8.29e-07!155;UBERON:0007026!8.29e-07!155;UBERON:0000475!9.38e-07!365 | |ontology_enrichment_uberon=UBERON:0000161!2.36e-09!35;UBERON:0004121!3.17e-09!169;UBERON:0000924!6.35e-09!173;UBERON:0006601!6.35e-09!173;UBERON:0003102!1.44e-08!95;UBERON:0004119!3.93e-08!169;UBERON:0000925!3.93e-08!169;UBERON:0006595!3.93e-08!169;UBERON:0000062!5.62e-08!511;UBERON:0001007!8.29e-07!155;UBERON:0001555!8.29e-07!155;UBERON:0007026!8.29e-07!155;UBERON:0000475!9.38e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.49e-10;28!UBERON:0000161;1.75e-09;19!UBERON:0000166;1.75e-09;19!UBERON:0003343;1.90e-09;4!UBERON:0004785;1.90e-09;4!UBERON:0003729;1.88e-07;13!UBERON:0001044;7.95e-07;6!UBERON:0003293;7.95e-07;6!UBERON:0003294;7.95e-07;6!UBERON:0010047;7.95e-07;6!UBERON:0003408;7.95e-07;6!UBERON:0000167;7.95e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.09e-12,99;UBERON:0000161,5.33e-11,36;UBERON:0000166,2.60e-10,22;UBERON:0000165,1.44e-09,29;UBERON:0000930,1.44e-09,29;UBERON:0003343,2.26e-09,4;UBERON:0004785,2.26e-09,4;UBERON:0000033,4.90e-09,56;UBERON:0000153,6.79e-08,62;UBERON:0007811,6.79e-08,62;UBERON:0001444,1.87e-07,49;UBERON:0003729,2.01e-07,13;UBERON:0001004,2.50e-07,74;UBERON:0004121,5.58e-07,171;UBERON:0000924,5.58e-07,171;UBERON:0006601,5.58e-07,171;UBERON:0001044,7.74e-07,6;UBERON:0003293,7.74e-07,6;UBERON:0003294,7.74e-07,6;UBERON:0010047,7.74e-07,6;UBERON:0000167,7.74e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.684372125364421,0.125542639594803,0.382067028739756,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.351339142772504,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.491337269247072,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,1.4351170855109,0.213557388818567,0.211931901159562,0.600182192168805,0,0.772921620136887,0.37223371266318,0.843881661206331,0.0974370051611986,1.51460264546469,0.184099797284599,0.323292113637624,0.710019185033229,0.503760491138201,0,0.773043412653187,2.72746120590835,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,2.96325770603289,1.1240175325762,7.53967293087231,11.3883787544991,0,0,0,0,0,0,0,0.570762456703795,0.790204397959275,0,0,0.234004265139238,0,0,5.20744597416465,6.52165447314978,5.73174545298229,7.84711633987697,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,2.20557117333613,15.101282185487,0,1.0925470080403,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0.206082023295445,0.732555718546747,0.660075999364704,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0.290033387828457,0.170453254832202,0,6.44611169907815,3.0750410778417,4.59405764980503,10.0146203046994,0,0.94443704049192,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,1.44333169088268,0,0,0,0,0,0,7.81059560703662,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0.614321404198464,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.984678443688556,0,0.449341755736634,0.716084698702437,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0,0,1.593108275997,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0.885741385813839,0.60298219312704,0,0.442317039724898,0.886642856860642,0.219385397153973,0,5.57694977114413,0.307801034015188,0.113942055847001,0,0.269272933229316,0.434589487688032,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0.971121518136371,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0.284609546029793,4.71493888244671,0,0.391969589657511,0.783532859223623,0,2.40780445460263,0,0.0730893170861856,0,0.775912131907355,0,0.451961481561065,0.411125773940253,0.397429223405979,0.0633107959558787,0.782205530939212,0.0801588202515337,0,0.19980960958213,0,0.572682980829578,0.343189995723929,0.14405479798815,0.372757606696298,0.471388069233591,0.815425236441684,0.523014231561666,0.203996435272644,0,0,0.273810757783986,0,0.859530882839914,0,0,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.590564889088493,0.169346664131569,0.795229689809303,0.272406812223151,0.321506296930038,0.275078873194468,0,0,0,0,0.670869375198532,0,0,0.422401346077626,0.537862017998534,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.681552087141687,0.113312091520126,0.293104467356165,0,0.129282956361551,0.26446520348538,0.342173675768659,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0.122026264901963,0.250381861413,0.573409195690071,0.332787154610557,0,2.49027542885215,1.62474530350739,0,0.285465333544967,0,0,0.144921028610825,1.04478362020812,0.233713309847224,0,0.947015026375446,0.251567901752575,0,0.228840068396924,0.302461847526478,0.310874401165561,0.443565449968902,0,0,0.155262956876259,0.829412415681711,0,0,0,0.761610424337591,0,0.363697318405119,0.644463342254931,0,0.796191777397232,0.400027764663154,0.343395705182793,0,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| ||
|short_description=p23@DST | |short_description=p23@DST | ||
}} | }} |
Latest revision as of 09:08, 19 September 2015
Short description: | p23@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_DST_5end |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | -472bp_to_X58677_5end |
EntrezGene: | DST |
HGNC: | 1090 |
UniProt: | Q03001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.31e-23 | 42 |
endodermal cell | 6.29e-16 | 58 |
epithelial cell of alimentary canal | 8.68e-15 | 20 |
acinar cell of salivary gland | 2.60e-13 | 3 |
epithelial cell | 1.53e-12 | 253 |
stratified squamous epithelial cell | 7.73e-11 | 6 |
keratin accumulating cell | 7.73e-11 | 6 |
stratified epithelial cell | 7.73e-11 | 6 |
keratinizing barrier epithelial cell | 7.73e-11 | 6 |
epithelial fate stem cell | 7.73e-11 | 6 |
stratified epithelial stem cell | 7.73e-11 | 6 |
surface ectodermal cell | 7.73e-11 | 6 |
squamous epithelial cell | 4.11e-10 | 63 |
general ecto-epithelial cell | 1.74e-09 | 14 |
acinar cell | 3.87e-08 | 5 |
keratinocyte | 1.44e-07 | 5 |
respiratory epithelial cell | 1.67e-07 | 13 |
protein secreting cell | 7.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.09e-12 | 99 |
orifice | 5.33e-11 | 36 |
oral opening | 2.60e-10 | 22 |
mouth | 1.44e-09 | 29 |
stomodeum | 1.44e-09 | 29 |
mucosa of oral region | 2.26e-09 | 4 |
respiratory system mucosa | 2.26e-09 | 4 |
head | 4.90e-09 | 56 |
anterior region of body | 6.79e-08 | 62 |
craniocervical region | 6.79e-08 | 62 |
subdivision of head | 1.87e-07 | 49 |
mouth mucosa | 2.01e-07 | 13 |
respiratory system | 2.50e-07 | 74 |
ectoderm-derived structure | 5.58e-07 | 171 |
ectoderm | 5.58e-07 | 171 |
presumptive ectoderm | 5.58e-07 | 171 |
saliva-secreting gland | 7.74e-07 | 6 |
gland of oral region | 7.74e-07 | 6 |
gland of foregut | 7.74e-07 | 6 |
oral gland | 7.74e-07 | 6 |
oral cavity | 7.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.38e-16 | 14 |