FFCP PHASE1:Hg19::chr6:56258939..56258948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81578 | |EntrezGene=81578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17025 | |HGNC=17025 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000370819,uc003pcu.1_5end | |association_with_transcript=-47bp_to_ENST00000370819,uc003pcu.1_5end | ||
|cluster_id=chr6:56258939..56258948,- | |||
|coexpression_cluster_id=C159 | |coexpression_cluster_id=C159 | ||
|description=CAGE_peak_8_at_COL21A1_5end | |description=CAGE_peak_8_at_COL21A1_5end | ||
|id=chr6:56258939..56258948,- | |id=chr6:56258939..56258948,- | ||
|ontology_enrichment_celltype=CL:0000453!5.60e-17!5;CL:0000039!1.83e-12!7;CL:0000586!1.83e-12!7;CL:0000990!1.11e-09!8;CL:0000451!5.21e-08!10 | |ontology_enrichment_celltype=CL:0000453!5.60e-17!5;CL:0000039!1.83e-12!7;CL:0000586!1.83e-12!7;CL:0000990!1.11e-09!8;CL:0000451!5.21e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.14e-23;7!CL:0000586;1.14e-23;7!CL:0000083;2.80e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.14e-23,7;CL:0000586,1.14e-23,7;CL:0000083,2.80e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.30e-40;1!UBERON:0004872;6.39e-07;7 | |||
|ontology_enrichment_disease=DOID:1799!7.40e-11!1;DOID:10165!7.40e-11!1;DOID:1798!7.40e-11!1;DOID:9119!1.30e-10!1 | |ontology_enrichment_disease=DOID:1799!7.40e-11!1;DOID:10165!7.40e-11!1;DOID:1798!7.40e-11!1;DOID:9119!1.30e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;9.91e-41;1!DOID:10165;9.91e-41;1!DOID:1798;9.91e-41;1!DOID:1793;2.80e-11;4!DOID:3095;2.93e-08;22!DOID:2994;2.93e-08;22!DOID:170;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.91e-41,1;DOID:10165,9.91e-41,1;DOID:1798,9.91e-41,1;DOID:1793,2.80e-11,4;DOID:3095,2.93e-08,22;DOID:2994,2.93e-08,22;DOID:170,5.92e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.79e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.79e-11,4;UBERON:0004340,3.79e-11,4;UBERON:0003124,6.39e-07,7 | |||
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|short_description=p8@COL21A1 | |short_description=p8@COL21A1 | ||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p8@COL21A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_COL21A1_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -47bp_to_ENST00000370819, uc003pcu.1_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.14e-23 | 7 |
germ cell | 1.14e-23 | 7 |
epithelial cell of pancreas | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.91e-41 | 1 |
endocrine pancreas cancer | 9.91e-41 | 1 |
pancreatic endocrine carcinoma | 9.91e-41 | 1 |
pancreatic cancer | 2.80e-11 | 4 |
germ cell and embryonal cancer | 2.93e-08 | 22 |
germ cell cancer | 2.93e-08 | 22 |
endocrine gland cancer | 5.92e-08 | 6 |