FFCP PHASE1:Hg19::chr6:55911444..55911446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:55911444..55911446,- | |||
|coexpression_cluster_id=C479 | |coexpression_cluster_id=C479 | ||
|description=CAGE_peak_at_chr6:55911444..55911446,- | |description=CAGE_peak_at_chr6:55911444..55911446,- | ||
|id=chr6:55911444..55911446,- | |id=chr6:55911444..55911446,- | ||
|ontology_enrichment_celltype=CL:0002618!2.64e-38!3;CL:0002543!9.49e-20!6;CL:0002575!2.05e-15!2;CL:0000071!7.17e-15!18;CL:0002546!7.17e-15!18;CL:0002139!2.43e-11!24;CL:0000842!8.99e-11!3;CL:0000224!2.11e-08!4;CL:1000306!2.43e-08!4;CL:0002547!2.43e-08!4;CL:0000115!5.46e-08!35;CL:0000669!6.04e-07!5 | |ontology_enrichment_celltype=CL:0002618!2.64e-38!3;CL:0002543!9.49e-20!6;CL:0002575!2.05e-15!2;CL:0000071!7.17e-15!18;CL:0002546!7.17e-15!18;CL:0002139!2.43e-11!24;CL:0000842!8.99e-11!3;CL:0000224!2.11e-08!4;CL:1000306!2.43e-08!4;CL:0002547!2.43e-08!4;CL:0000115!5.46e-08!35;CL:0000669!6.04e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.76e-18;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.76e-18,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.25e-19;11!UBERON:0009497;1.21e-16;13!UBERON:0001041;4.53e-08;30!UBERON:0003104;2.32e-07;31 | |||
|ontology_enrichment_disease=DOID:5662!7.48e-30!1 | |ontology_enrichment_disease=DOID:5662!7.48e-30!1 | ||
|ontology_enrichment_disease_v019=DOID:5662;5.42e-195;1!DOID:7;2.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,5.42e-195,1 | |||
|ontology_enrichment_uberon=UBERON:0002066!1.81e-23!5;UBERON:0001986!7.17e-15!18;UBERON:0004638!7.17e-15!18;UBERON:0004852!7.17e-15!18;UBERON:0001638!1.58e-13!9;UBERON:0003920!1.58e-13!9;UBERON:0004582!1.58e-13!9;UBERON:0000487!2.64e-12!22;UBERON:0006914!6.47e-11!25;UBERON:0000415!2.43e-08!4;UBERON:0007240!2.43e-08!4;UBERON:0005742!2.43e-08!4;UBERON:0005734!2.43e-08!4;UBERON:0004664!2.43e-08!4;UBERON:0004663!2.43e-08!4;UBERON:0001981!5.07e-08!60;UBERON:0007500!5.07e-08!60;UBERON:0004537!5.07e-08!60;UBERON:0006965!5.07e-08!60;UBERON:0000055!5.00e-07!69;UBERON:0004535!9.94e-07!110 | |ontology_enrichment_uberon=UBERON:0002066!1.81e-23!5;UBERON:0001986!7.17e-15!18;UBERON:0004638!7.17e-15!18;UBERON:0004852!7.17e-15!18;UBERON:0001638!1.58e-13!9;UBERON:0003920!1.58e-13!9;UBERON:0004582!1.58e-13!9;UBERON:0000487!2.64e-12!22;UBERON:0006914!6.47e-11!25;UBERON:0000415!2.43e-08!4;UBERON:0007240!2.43e-08!4;UBERON:0005742!2.43e-08!4;UBERON:0005734!2.43e-08!4;UBERON:0004664!2.43e-08!4;UBERON:0004663!2.43e-08!4;UBERON:0001981!5.07e-08!60;UBERON:0007500!5.07e-08!60;UBERON:0004537!5.07e-08!60;UBERON:0006965!5.07e-08!60;UBERON:0000055!5.00e-07!69;UBERON:0004535!9.94e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.95e-12;19!UBERON:0006925;6.95e-12;19!UBERON:0002423;2.15e-09;25!UBERON:0002368;4.53e-08;33!UBERON:0002365;4.53e-08;31!UBERON:0002330;4.53e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.95e-12,19;UBERON:0006925,6.95e-12,19;UBERON:0008836,6.95e-12,19;UBERON:0008835,1.80e-10,22;UBERON:0003894,1.80e-10,22;UBERON:0009854,4.42e-10,23;UBERON:0007499,2.15e-09,25;UBERON:0009497,2.15e-09,25;UBERON:0000015,2.15e-09,25;UBERON:0002423,2.15e-09,25;UBERON:0006235,2.15e-09,25;UBERON:0004161,2.15e-09,25;UBERON:0009856,4.34e-09,26;UBERON:0002365,7.41e-08,31;UBERON:0002330,7.41e-08,31;UBERON:0002368,4.03e-07,35 | |||
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|short_description=p@chr6:55911444..55911446,- | |short_description=p@chr6:55911444..55911446,- | ||
}} | }} |
Latest revision as of 02:27, 31 July 2015
Short description: | p@chr6:55911444..55911446, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:55911444..55911446, - |
Coexpression cluster: | C479_pleomorphic_mesothelioma_cholangiocellular_melanoma_Saos2_serous_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.76e-18 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.95e-12 | 19 |
digestive gland | 6.95e-12 | 19 |
liver bud | 6.95e-12 | 19 |
hepatic diverticulum | 1.80e-10 | 22 |
liver primordium | 1.80e-10 | 22 |
digestive tract diverticulum | 4.42e-10 | 23 |
epithelial sac | 2.15e-09 | 25 |
epithelium of foregut-midgut junction | 2.15e-09 | 25 |
anatomical boundary | 2.15e-09 | 25 |
hepatobiliary system | 2.15e-09 | 25 |
foregut-midgut junction | 2.15e-09 | 25 |
septum transversum | 2.15e-09 | 25 |
sac | 4.34e-09 | 26 |
exocrine gland | 7.41e-08 | 31 |
exocrine system | 7.41e-08 | 31 |
endocrine gland | 4.03e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 5.42e-195 | 1 |