FFCP PHASE1:Hg19::chr19:42041721..42041734,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:42041721..42041734,+
|short_description=p8@CEACAM21
|description=CAGE_peak_8_at_CEACAM21_5end
|association_with_transcript=19bp_to_ENST00000487420_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90273 | |EntrezGene=90273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28834 | |HGNC=28834 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000487420_5end | |||
|cluster_id=chr19:42041721..42041734,+ | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_8_at_CEACAM21_5end | |||
|id=chr19:42041721..42041734,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.33e-40!24;CL:0000826!1.33e-40!24;CL:0000236!1.38e-20!14;CL:0000542!2.24e-19!53;CL:0000051!2.24e-19!53;CL:0000838!9.61e-18!52;CL:0002087!6.95e-12!119;CL:0002031!4.41e-10!124;CL:0000738!5.46e-10!140;CL:0000037!1.57e-07!172;CL:0000566!1.57e-07!172;CL:0002032!2.22e-07!165;CL:0000837!2.22e-07!165;CL:0000988!9.65e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.93e-42;24!CL:0000236;5.18e-35;13!CL:0000946;7.48e-30;1!CL:0000786;7.48e-30;1!CL:0000542;1.32e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.52e-50,14;CL:0000945,1.73e-42,24;CL:0000826,1.73e-42,24;CL:0000946,7.48e-30,1;CL:0000786,7.48e-30,1;CL:0000980,7.48e-30,1;CL:0000838,7.57e-20,52;CL:0000542,1.77e-19,53;CL:0000051,1.77e-19,53;CL:0000785,1.15e-15,2;CL:0000955,1.15e-15,2;CL:0000818,1.15e-15,2;CL:0000954,1.15e-15,2;CL:0000816,1.15e-15,2;CL:0000817,6.73e-11,3;CL:0002087,4.92e-09,115;CL:0002031,1.15e-08,120;CL:0000738,1.14e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;1.15e-15;2!CL:0000051;1.32e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.15e-29;1!DOID:74;1.43e-15;2!DOID:1287;1.89e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.33e-29,1;DOID:74,1.54e-15,2;DOID:1287,1.96e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-21!115;UBERON:0002020!8.76e-16!34;UBERON:0003528!8.76e-16!34;UBERON:0001049!5.16e-15!57;UBERON:0005068!5.16e-15!57;UBERON:0006241!5.16e-15!57;UBERON:0007135!5.16e-15!57;UBERON:0002308!7.35e-14!9;UBERON:0000125!7.35e-14!9;UBERON:0002791!2.26e-12!33;UBERON:0001893!6.32e-12!34;UBERON:0002616!2.35e-11!59;UBERON:0002780!5.45e-11!41;UBERON:0001890!5.45e-11!41;UBERON:0006240!5.45e-11!41;UBERON:0001869!6.35e-11!32;UBERON:0003080!1.18e-10!42;UBERON:0002420!1.22e-10!9;UBERON:0007245!1.22e-10!9;UBERON:0010009!1.22e-10!9;UBERON:0010011!1.22e-10!9;UBERON:0000454!1.22e-10!9;UBERON:0005743!3.39e-10!86;UBERON:0000955!4.81e-10!69;UBERON:0006238!4.81e-10!69;UBERON:0004177!5.48e-10!7;UBERON:0001017!7.63e-10!82;UBERON:0009663!1.06e-09!7;UBERON:0002106!1.24e-09!3;UBERON:0004854!1.24e-09!3;UBERON:0009034!1.24e-09!3;UBERON:0002095!1.24e-09!3;UBERON:0004782!1.24e-09!3;UBERON:0003281!1.24e-09!3;UBERON:0009664!1.24e-09!3;UBERON:0002296!1.24e-09!3;UBERON:0005602!1.24e-09!3;UBERON:0001179!1.24e-09!3;UBERON:0006293!1.24e-09!3;UBERON:0003075!2.58e-09!86;UBERON:0007284!2.58e-09!86;UBERON:0000073!9.42e-09!94;UBERON:0001016!9.42e-09!94;UBERON:0002346!1.11e-08!90;UBERON:0006331!1.46e-08!3;UBERON:0002771!3.00e-08!3;UBERON:0002298!5.04e-08!8;UBERON:0002619!6.57e-08!22;UBERON:0003056!2.27e-07!61;UBERON:0001875!5.04e-07!2;UBERON:0006514!5.04e-07!2;UBERON:0001950!7.19e-07!20;UBERON:0000956!8.20e-07!25;UBERON:0000203!8.20e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@CEACAM21 | |||
}} | }} |
Latest revision as of 05:59, 18 September 2015
Short description: | p8@CEACAM21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CEACAM21_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | 19bp_to_ENST00000487420_5end |
EntrezGene: | CEACAM21 |
HGNC: | 28834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.52e-50 | 14 |
lymphocyte of B lineage | 1.73e-42 | 24 |
pro-B cell | 1.73e-42 | 24 |
antibody secreting cell | 7.48e-30 | 1 |
plasma cell | 7.48e-30 | 1 |
plasmablast | 7.48e-30 | 1 |
lymphoid lineage restricted progenitor cell | 7.57e-20 | 52 |
lymphocyte | 1.77e-19 | 53 |
common lymphoid progenitor | 1.77e-19 | 53 |
mature B cell | 1.15e-15 | 2 |
pre-B-II cell | 1.15e-15 | 2 |
transitional stage B cell | 1.15e-15 | 2 |
small pre-B-II cell | 1.15e-15 | 2 |
immature B cell | 1.15e-15 | 2 |
precursor B cell | 6.73e-11 | 3 |
nongranular leukocyte | 4.92e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
leukocyte | 1.14e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.33e-29 | 1 |
hematopoietic system disease | 1.54e-15 | 2 |
cardiovascular system disease | 1.96e-08 | 4 |