FFCP PHASE1:Hg19::chr6:35511409..35511447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:35511409..35511447,+ | |||
|coexpression_cluster_id=C1937 | |coexpression_cluster_id=C1937 | ||
|description=CAGE_peak_at_chr6:35511409..35511447,+ | |description=CAGE_peak_at_chr6:35511409..35511447,+ | ||
|id=chr6:35511409..35511447,+ | |id=chr6:35511409..35511447,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.93e-27!7;CL:0000586!2.93e-27!7;CL:0002322!5.51e-18!5;CL:0002541!2.25e-11!3 | |ontology_enrichment_celltype=CL:0000039!2.93e-27!7;CL:0000586!2.93e-27!7;CL:0002322!5.51e-18!5;CL:0002541!2.25e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.19e-81;7!CL:0000586;2.19e-81;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.73e-81,7;CL:0000586,1.73e-81,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.92e-19;10!UBERON:0005564;3.92e-19;10!UBERON:0007123;1.33e-10;5 | |||
|ontology_enrichment_disease=DOID:3095!1.38e-12!22;DOID:2994!1.38e-12!22 | |ontology_enrichment_disease=DOID:3095!1.38e-12!22;DOID:2994!1.38e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.26e-25;22!DOID:2994;1.26e-25;22!DOID:1799;5.38e-13;1!DOID:10165;5.38e-13;1!DOID:1798;5.38e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.17e-25,22;DOID:2994,1.17e-25,22;DOID:1799,6.82e-13,1;DOID:10165,6.82e-13,1;DOID:1798,6.82e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.25e-11!3;UBERON:0000920!2.25e-11!3;UBERON:0000341!6.50e-09!2;UBERON:0003124!3.03e-08!7;UBERON:0000473!3.76e-08!8;UBERON:0003127!4.04e-08!2 | |ontology_enrichment_uberon=UBERON:0000476!2.25e-11!3;UBERON:0000920!2.25e-11!3;UBERON:0000341!6.50e-09!2;UBERON:0003124!3.03e-08!7;UBERON:0000473!3.76e-08!8;UBERON:0003127!4.04e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.97e-24;2!UBERON:0000473;7.92e-24;8!UBERON:0003135;2.01e-17;11!UBERON:0002046;1.33e-10;5!UBERON:0000991;3.03e-09;21!UBERON:0003101;7.81e-09;22!UBERON:0000079;7.81e-09;22!UBERON:0000974;1.00e-08;6!UBERON:0000922;3.67e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.97e-24,2;UBERON:0000473,7.47e-24,8;UBERON:0003135,1.93e-17,11;UBERON:0002046,1.33e-10,5;UBERON:0004117,1.33e-10,5;UBERON:0007689,1.33e-10,5;UBERON:0007123,1.33e-10,5;UBERON:0003091,1.33e-10,5;UBERON:0000991,2.96e-09,21;UBERON:0009196,2.96e-09,21;UBERON:0009117,2.96e-09,21;UBERON:0005564,2.96e-09,21;UBERON:0004176,7.65e-09,22;UBERON:0003101,7.65e-09,22;UBERON:0000079,7.65e-09,22;UBERON:0003886,1.74e-07,54 | |||
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| ||
|short_description=p@chr6:35511409..35511447,+ | |short_description=p@chr6:35511409..35511447,+ | ||
}} | }} |
Latest revision as of 01:02, 31 July 2015
Short description: | p@chr6:35511409..35511447, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35511409..35511447, + |
Coexpression cluster: | C1937_choriocarcinoma_thyroid_testicular_throat_Alveolar_lung_pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.73e-81 | 7 |
germ cell | 1.73e-81 | 7 |
Ontology term | p-value | n |
---|---|---|
throat | 2.97e-24 | 2 |
testis | 7.47e-24 | 8 |
male reproductive organ | 1.93e-17 | 11 |
thyroid gland | 1.33e-10 | 5 |
pharyngeal pouch | 1.33e-10 | 5 |
thyroid diverticulum | 1.33e-10 | 5 |
pharyngeal pouch 2 | 1.33e-10 | 5 |
thyroid primordium | 1.33e-10 | 5 |
gonad | 2.96e-09 | 21 |
indifferent external genitalia | 2.96e-09 | 21 |
indifferent gonad | 2.96e-09 | 21 |
gonad primordium | 2.96e-09 | 21 |
external genitalia | 7.65e-09 | 22 |
male organism | 7.65e-09 | 22 |
male reproductive system | 7.65e-09 | 22 |
body cavity precursor | 1.74e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.17e-25 | 22 |
germ cell cancer | 1.17e-25 | 22 |
islet cell tumor | 6.82e-13 | 1 |
endocrine pancreas cancer | 6.82e-13 | 1 |
pancreatic endocrine carcinoma | 6.82e-13 | 1 |