FFCP PHASE1:Hg19::chr6:160101445..160101456,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6648 | |EntrezGene=6648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11180 | |HGNC=11180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_uc003qsf.3_5end | |association_with_transcript=-42bp_to_uc003qsf.3_5end | ||
|cluster_id=chr6:160101445..160101456,- | |||
|coexpression_cluster_id=C107 | |coexpression_cluster_id=C107 | ||
|description=CAGE_peak_30_at_SOD2_5end | |description=CAGE_peak_30_at_SOD2_5end | ||
|id=chr6:160101445..160101456,- | |id=chr6:160101445..160101456,- | ||
|ontology_enrichment_celltype=CL:0002057!8.93e-25!42;CL:0000860!5.74e-23!45;CL:0000766!1.39e-17!76;CL:0002194!4.77e-17!63;CL:0000576!4.77e-17!63;CL:0000040!4.77e-17!63;CL:0000559!4.77e-17!63;CL:0002009!6.63e-17!65;CL:0000839!1.70e-14!70;CL:0000557!4.53e-14!71;CL:0000763!5.46e-10!112;CL:0000049!5.46e-10!112 | |ontology_enrichment_celltype=CL:0002057!8.93e-25!42;CL:0000860!5.74e-23!45;CL:0000766!1.39e-17!76;CL:0002194!4.77e-17!63;CL:0000576!4.77e-17!63;CL:0000040!4.77e-17!63;CL:0000559!4.77e-17!63;CL:0002009!6.63e-17!65;CL:0000839!1.70e-14!70;CL:0000557!4.53e-14!71;CL:0000763!5.46e-10!112;CL:0000049!5.46e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-62;33!CL:0002057;2.57e-62;33!CL:0000473;6.12e-49;39!CL:0000234;6.12e-49;39!CL:0000576;1.13e-31;48!CL:0000766;4.48e-26;69!CL:0000775;8.09e-13;3!CL:0000094;2.31e-12;8!CL:0000763;1.08e-11;100!CL:0000081;6.75e-09;11!CL:0000771;7.12e-09;2!CL:0002087;1.71e-08;104!CL:0000738;6.34e-07;136!CL:0000153;7.69e-07;9!CL:0000447;7.69e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-61,42;CL:0002057,1.02e-61,42;CL:0000473,3.75e-57,48;CL:0000234,3.75e-57,48;CL:0000766,8.15e-51,72;CL:0002194,2.72e-44,59;CL:0000576,2.72e-44,59;CL:0000040,2.72e-44,59;CL:0000559,2.72e-44,59;CL:0002009,1.24e-42,61;CL:0000839,6.40e-39,66;CL:0000557,3.04e-38,67;CL:0000763,2.44e-31,108;CL:0000049,2.44e-31,108;CL:0000738,2.80e-23,136;CL:0002087,1.65e-19,115;CL:0002032,1.89e-18,161;CL:0000837,1.89e-18,161;CL:0002031,2.03e-18,120;CL:0000037,2.34e-17,168;CL:0000988,4.44e-16,177;CL:0000775,6.27e-13,3;CL:0000094,1.92e-12,8;CL:0002320,1.49e-09,361;CL:0000134,3.30e-09,354;CL:0000081,5.91e-09,11;CL:0000771,6.73e-09,2;CL:0000034,4.46e-08,441;CL:0000048,5.24e-08,427;CL:0000723,9.21e-08,433;CL:0000219,1.31e-07,386;CL:0000153,5.55e-07,9;CL:0000447,5.55e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-46;42!CL:0000049;1.01e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.12e-11!80;UBERON:0004765!3.02e-11!101;UBERON:0001434!3.02e-11!101;UBERON:0002193!3.25e-11!112;UBERON:0002390!1.49e-10!102;UBERON:0003061!1.49e-10!102;UBERON:0002405!1.50e-10!115;UBERON:0001474!5.20e-10!86;UBERON:0002204!6.28e-09!167;UBERON:0007023!1.90e-08!115 | |ontology_enrichment_uberon=UBERON:0002371!2.12e-11!80;UBERON:0004765!3.02e-11!101;UBERON:0001434!3.02e-11!101;UBERON:0002193!3.25e-11!112;UBERON:0002390!1.49e-10!102;UBERON:0003061!1.49e-10!102;UBERON:0002405!1.50e-10!115;UBERON:0001474!5.20e-10!86;UBERON:0002204!6.28e-09!167;UBERON:0007023!1.90e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.08e-33,76;UBERON:0002405,1.51e-32,93;UBERON:0002193,3.75e-31,108;UBERON:0001474,4.75e-30,82;UBERON:0001434,1.47e-29,100;UBERON:0004765,7.03e-29,90;UBERON:0002390,3.90e-28,98;UBERON:0003061,3.90e-28,98;UBERON:0002204,5.69e-16,167;UBERON:0003081,6.97e-11,203;UBERON:0002384,4.78e-09,371;UBERON:0000926,6.53e-07,315;UBERON:0004120,6.53e-07,315;UBERON:0006603,6.53e-07,315 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.975865597581014,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0,0,0.30120591877825,0,0,0,0,0.553995408531877,1.60435557976113,1.30206522429511,0.223915474239924,0,0.515151135268373,0.726991193897824,0.755751887377619,0,4.18372266430232,2.46700732813095,4.02618282163635,4.02769349251011,2.30544635876191,2.12834006899727,6.89491361473237,3.87290810150296,4.06279459783025,1.69418105588344,0.272906150057846,1.57306439111559,5.50951006267625,1.92557416245656,3.19668562899521,2.30895910130701,1.19678194572979,1.27867425159808,12.1887880224005,3.40431134814684,1.86846674698672,3.01498398308092,3.65038042894141,2.17188844705117,7.87019353423379,0.368277635987565,4.43047342417238,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0.547992461293902,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0.50133791063589,1.30361867064741,0,1.94653948121054,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,2.30986316417718,2.31492756288305,4.56609965363036,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,1.00451418286425,0,0,0,0,0.434343920002738,0.821905290201534,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,7.49007023947182,8.97484377612075,1.65766205374414,0.613457458595699,1.00034104211935,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.322260734604821,0.145016693914229,0.170453254832202,0.267096106940212,0.165284915360978,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0,0,0,0,0,0,0.731140468893853,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,4.43326034125095,1.64647446479951,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0,1.29694662238543,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.403599414382095,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0.333926115068718,0.16480387422676,0,0,0,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.331737779793674,0,0,0.10893846351899,0,0.0769502585037971,0.91153644677601,0,0,0.108647371922008,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0.547621515567972,0,0,0,0,0.916641696046735,2.87149209830726,0.399358000997982,0.429226048136571,0,0.134366944973453,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0.182248669974074,0,0.472834243795189,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0.129282956361551,0.26446520348538,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,1.14681839138014,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.457680136793847,0.453692771289717,0,0.443565449968902,0.318593534327405,2.69881867298163,0.310525913752519,0.414706207840855,0,0.521745061811734,0.450772826991655,0.761610424337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| ||
|short_description=p30@SOD2 | |short_description=p30@SOD2 | ||
}} | }} |
Latest revision as of 14:07, 16 September 2015
Short description: | p30@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_SOD2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -42bp_to_uc003qsf.3_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.08e-33 | 76 |
immune system | 1.51e-32 | 93 |
hemolymphoid system | 3.75e-31 | 108 |
bone element | 4.75e-30 | 82 |
skeletal system | 1.47e-29 | 100 |
skeletal element | 7.03e-29 | 90 |
hematopoietic system | 3.90e-28 | 98 |
blood island | 3.90e-28 | 98 |
musculoskeletal system | 5.69e-16 | 167 |
lateral plate mesoderm | 6.97e-11 | 203 |
connective tissue | 4.78e-09 | 371 |
mesoderm | 6.53e-07 | 315 |
mesoderm-derived structure | 6.53e-07 | 315 |
presumptive mesoderm | 6.53e-07 | 315 |