FFCP PHASE1:Hg19::chr6:160100686..160100698,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_AK093984_5end | |association_with_transcript=154bp_to_AK093984_5end | ||
|cluster_id=chr6:160100686..160100698,- | |||
|coexpression_cluster_id=C954 | |coexpression_cluster_id=C954 | ||
|description=CAGE_peak_4_at_AK093984_5end | |description=CAGE_peak_4_at_AK093984_5end | ||
|id=chr6:160100686..160100698,- | |id=chr6:160100686..160100698,- | ||
|ontology_enrichment_celltype=CL:0002057!9.96e-25!42;CL:0000860!3.49e-22!45;CL:0000766!2.37e-17!76;CL:0002194!2.38e-16!63;CL:0000576!2.38e-16!63;CL:0000040!2.38e-16!63;CL:0000559!2.38e-16!63;CL:0002009!1.93e-15!65;CL:0000839!3.37e-14!70;CL:0000557!8.14e-14!71;CL:0000763!5.40e-09!112;CL:0000049!5.40e-09!112 | |ontology_enrichment_celltype=CL:0002057!9.96e-25!42;CL:0000860!3.49e-22!45;CL:0000766!2.37e-17!76;CL:0002194!2.38e-16!63;CL:0000576!2.38e-16!63;CL:0000040!2.38e-16!63;CL:0000559!2.38e-16!63;CL:0002009!1.93e-15!65;CL:0000839!3.37e-14!70;CL:0000557!8.14e-14!71;CL:0000763!5.40e-09!112;CL:0000049!5.40e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-56;33!CL:0002057;2.40e-56;33!CL:0000473;3.55e-47;39!CL:0000234;3.55e-47;39!CL:0000576;4.90e-25;48!CL:0000766;5.46e-23;69!CL:0000775;3.45e-13;3!CL:0000763;1.27e-11;100!CL:0002087;1.79e-08;104!CL:0000094;2.10e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.12e-53,48;CL:0000234,1.12e-53,48;CL:0000860,1.42e-52,42;CL:0002057,1.42e-52,42;CL:0000766,3.38e-45,72;CL:0002194,1.20e-41,59;CL:0000576,1.20e-41,59;CL:0000040,1.20e-41,59;CL:0000559,1.20e-41,59;CL:0002009,4.29e-40,61;CL:0000839,1.28e-36,66;CL:0000557,5.50e-36,67;CL:0000763,7.17e-28,108;CL:0000049,7.17e-28,108;CL:0000738,1.06e-20,136;CL:0002087,1.88e-18,115;CL:0002031,1.98e-17,120;CL:0002032,2.09e-16,161;CL:0000837,2.09e-16,161;CL:0000037,1.96e-15,168;CL:0000988,2.69e-14,177;CL:0000775,2.13e-13,3;CL:0000094,1.69e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-39;42!CL:0000049;1.31e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.30e-11!115;UBERON:0002371!1.52e-11!80;UBERON:0002193!8.23e-11!112;UBERON:0002390!3.24e-10!102;UBERON:0003061!3.24e-10!102;UBERON:0001474!6.98e-10!86;UBERON:0004765!1.31e-09!101;UBERON:0001434!1.31e-09!101;UBERON:0002204!5.40e-09!167;UBERON:0007023!3.06e-08!115 | |ontology_enrichment_uberon=UBERON:0002405!1.30e-11!115;UBERON:0002371!1.52e-11!80;UBERON:0002193!8.23e-11!112;UBERON:0002390!3.24e-10!102;UBERON:0003061!3.24e-10!102;UBERON:0001474!6.98e-10!86;UBERON:0004765!1.31e-09!101;UBERON:0001434!1.31e-09!101;UBERON:0002204!5.40e-09!167;UBERON:0007023!3.06e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.02e-31,76;UBERON:0002405,1.46e-28,93;UBERON:0001474,2.56e-28,82;UBERON:0002193,1.07e-25,108;UBERON:0004765,2.89e-25,90;UBERON:0002390,9.39e-25,98;UBERON:0003061,9.39e-25,98;UBERON:0001434,3.93e-22,100;UBERON:0002204,1.57e-15,167;UBERON:0003081,1.21e-12,203;UBERON:0000926,6.00e-07,315;UBERON:0004120,6.00e-07,315;UBERON:0006603,6.00e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,2.01697543935533,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0,0,0,0,0.581592955118259,0.755751887377619,0.727752183563449,2.32429036905685,3.28934310417461,4.02618282163635,2.58923153089935,2.56160706529101,2.12834006899727,6.20542225325913,4.51839278508678,12.1883837934908,1.31769637679823,0.272906150057846,2.47195832889593,4.89734227793444,4.17207735198922,7.67204550958849,1.64925650093358,0.797854630486527,0.852449501065388,6.96502172708602,4.53908179752912,9.34233373493363,2.00998932205395,0.521482918420201,1.08594422352558,4.84319602106695,3.31449872388808,3.79754864929061,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.600952235626387,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,3.9313088667105,2.36315962672562,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.577465791044295,1.85194205030644,0.380508304469197,0,0,0,0.936017060556951,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,1.50677127429638,8.43335757932127,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,5.99205619157746,2.99161459204025,1.65766205374414,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.533637789017222,0,0,0,0.496215615637554,0,0,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,1.28381696410176,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0.211125408127993,0.398495976502139,1.10513566212459,0,0,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0.591095237907095,0.658156191461918,0,0,0.0769502585037971,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,2.15361907373044,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20655980437755,0.0524545881349981,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0.732761168390412,0,0.646414781807753,0.13223260174269,0,0,0.213574825135389,0,0,1.48849806543585,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0.732157589411779,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0.899606224327209,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0,0.406870733204662,0,0.214821114084977,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0.413373593002368,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0.514464028312255,0,0,0,0.111231401892069,0,0,0,1.82631744101899,0,2.8665101273223,0,0,0,0.173858272302579,0,1.03608082081518,0,0.691259661814092,0,0.473328002922261,0,0,0,0.62041277132864,0,0.223710863595585,0,0,6.47428837187895,1.64260490969995,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.154348316215889,0,0,0.490296643507811,0,0.588925401344836,0,0,0.169927114687817,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0.286679166302903,0,0,0,0,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0.2132339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| ||
|short_description=p4@AK093984 | |short_description=p4@AK093984 | ||
}} | }} |
Latest revision as of 21:35, 30 July 2015
Short description: | p4@AK093984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AK093984_5end |
Coexpression cluster: | C954_heart_CD14_Neutrophils_Eosinophils_Lymphatic_renal_Monocytederived |
Association with transcript: | 154bp_to_AK093984_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.12e-53 | 48 |
phagocyte | 1.12e-53 | 48 |
classical monocyte | 1.42e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-52 | 42 |
myeloid leukocyte | 3.38e-45 | 72 |
monopoietic cell | 1.20e-41 | 59 |
monocyte | 1.20e-41 | 59 |
monoblast | 1.20e-41 | 59 |
promonocyte | 1.20e-41 | 59 |
macrophage dendritic cell progenitor | 4.29e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.28e-36 | 66 |
granulocyte monocyte progenitor cell | 5.50e-36 | 67 |
myeloid cell | 7.17e-28 | 108 |
common myeloid progenitor | 7.17e-28 | 108 |
leukocyte | 1.06e-20 | 136 |
nongranular leukocyte | 1.88e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-17 | 120 |
hematopoietic oligopotent progenitor cell | 2.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-16 | 161 |
hematopoietic stem cell | 1.96e-15 | 168 |
hematopoietic cell | 2.69e-14 | 177 |
neutrophil | 2.13e-13 | 3 |
granulocyte | 1.69e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.02e-31 | 76 |
immune system | 1.46e-28 | 93 |
bone element | 2.56e-28 | 82 |
hemolymphoid system | 1.07e-25 | 108 |
skeletal element | 2.89e-25 | 90 |
hematopoietic system | 9.39e-25 | 98 |
blood island | 9.39e-25 | 98 |
skeletal system | 3.93e-22 | 100 |
musculoskeletal system | 1.57e-15 | 167 |
lateral plate mesoderm | 1.21e-12 | 203 |
mesoderm | 6.00e-07 | 315 |
mesoderm-derived structure | 6.00e-07 | 315 |
presumptive mesoderm | 6.00e-07 | 315 |