FFCP PHASE1:Hg19::chr6:159071015..159071096,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94120 | |EntrezGene=94120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15587 | |HGNC=15587 | ||
|TSSclassifier=strong | |||
|UniProt=F5H278,B4E2A9,Q4VX76 | |UniProt=F5H278,B4E2A9,Q4VX76 | ||
|association_with_transcript=0bp_to_ENST00000360448,ENST00000469735,ENST00000543689,NM_001009991,NM_001242384,NM_001242394,NM_001242395,uc003qro.2,uc011efp.1_5end | |association_with_transcript=0bp_to_ENST00000360448,ENST00000469735,ENST00000543689,NM_001009991,NM_001242384,NM_001242394,NM_001242395,uc003qro.2,uc011efp.1_5end | ||
|cluster_id=chr6:159071015..159071096,+ | |||
|coexpression_cluster_id=C4200 | |coexpression_cluster_id=C4200 | ||
|description=CAGE_peak_1_at_SYTL3_5end | |description=CAGE_peak_1_at_SYTL3_5end | ||
|id=chr6:159071015..159071096,+ | |id=chr6:159071015..159071096,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.40e-40!140;CL:0000988!1.15e-36!182;CL:0000037!2.11e-36!172;CL:0000566!2.11e-36!172;CL:0002032!2.67e-34!165;CL:0000837!2.67e-34!165;CL:0002031!4.96e-32!124;CL:0002087!1.75e-29!119;CL:0000766!9.49e-24!76;CL:0000763!1.13e-21!112;CL:0000049!1.13e-21!112;CL:0000557!1.80e-20!71;CL:0002057!1.16e-18!42;CL:0000839!2.11e-18!70;CL:0002009!2.17e-17!65;CL:0002194!2.83e-16!63;CL:0000576!2.83e-16!63;CL:0000040!2.83e-16!63;CL:0000559!2.83e-16!63;CL:0000860!1.02e-15!45;CL:0000134!1.19e-15!358;CL:0002320!4.53e-14!365;CL:0000791!1.15e-12!18;CL:0000789!1.15e-12!18;CL:0002420!1.15e-12!18;CL:0002419!1.15e-12!18;CL:0000790!1.15e-12!18;CL:0000838!3.12e-12!52;CL:0000048!8.51e-12!430;CL:0000084!1.05e-11!25;CL:0000827!1.05e-11!25;CL:0000542!1.44e-11!53;CL:0000051!1.44e-11!53;CL:0000723!1.79e-10!436;CL:0000034!6.16e-10!444;CL:0000219!9.62e-10!390;CL:0000625!2.66e-08!11 | |ontology_enrichment_celltype=CL:0000738!2.40e-40!140;CL:0000988!1.15e-36!182;CL:0000037!2.11e-36!172;CL:0000566!2.11e-36!172;CL:0002032!2.67e-34!165;CL:0000837!2.67e-34!165;CL:0002031!4.96e-32!124;CL:0002087!1.75e-29!119;CL:0000766!9.49e-24!76;CL:0000763!1.13e-21!112;CL:0000049!1.13e-21!112;CL:0000557!1.80e-20!71;CL:0002057!1.16e-18!42;CL:0000839!2.11e-18!70;CL:0002009!2.17e-17!65;CL:0002194!2.83e-16!63;CL:0000576!2.83e-16!63;CL:0000040!2.83e-16!63;CL:0000559!2.83e-16!63;CL:0000860!1.02e-15!45;CL:0000134!1.19e-15!358;CL:0002320!4.53e-14!365;CL:0000791!1.15e-12!18;CL:0000789!1.15e-12!18;CL:0002420!1.15e-12!18;CL:0002419!1.15e-12!18;CL:0000790!1.15e-12!18;CL:0000838!3.12e-12!52;CL:0000048!8.51e-12!430;CL:0000084!1.05e-11!25;CL:0000827!1.05e-11!25;CL:0000542!1.44e-11!53;CL:0000051!1.44e-11!53;CL:0000723!1.79e-10!436;CL:0000034!6.16e-10!444;CL:0000219!9.62e-10!390;CL:0000625!2.66e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.50e-17;33!CL:0002057;4.50e-17;33!CL:0000791;1.24e-14;18!CL:0000789;1.24e-14;18!CL:0002419;1.24e-14;18!CL:0000576;1.03e-13;48!CL:0000766;1.99e-13;69!CL:0000084;2.49e-13;25!CL:0000473;2.63e-13;39!CL:0000234;2.63e-13;39!CL:0002087;1.19e-11;104!CL:0000738;1.08e-09;136!CL:0000625;1.69e-09;11!CL:0000988;2.20e-08;177!CL:0000763;4.59e-08;100!CL:0000094;1.21e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.19e-47,136;CL:0000037,5.50e-41,168;CL:0000988,3.02e-40,177;CL:0002032,2.43e-38,161;CL:0000837,2.43e-38,161;CL:0002031,7.89e-36,120;CL:0002087,8.21e-34,115;CL:0000766,4.05e-29,72;CL:0000557,3.74e-25,67;CL:0000763,3.91e-25,108;CL:0000049,3.91e-25,108;CL:0000839,7.70e-22,66;CL:0000860,1.20e-21,42;CL:0002057,1.20e-21,42;CL:0002009,1.97e-21,61;CL:0000473,2.28e-20,48;CL:0000234,2.28e-20,48;CL:0002194,4.44e-20,59;CL:0000576,4.44e-20,59;CL:0000040,4.44e-20,59;CL:0000559,4.44e-20,59;CL:0000791,1.33e-14,18;CL:0000789,1.33e-14,18;CL:0002420,1.33e-14,18;CL:0002419,1.33e-14,18;CL:0000790,1.33e-14,18;CL:0000134,1.87e-13,354;CL:0000084,2.47e-13,25;CL:0000827,2.47e-13,25;CL:0000838,1.89e-12,52;CL:0002320,3.65e-12,361;CL:0000542,6.54e-12,53;CL:0000051,6.54e-12,53;CL:0000625,1.77e-09,11;CL:0000219,3.14e-08,386;CL:0000048,3.71e-08,427;CL:0000094,1.25e-07,8;CL:0000723,2.21e-07,433;CL:0000034,4.18e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.32e-16;42!CL:0000790;1.24e-14;18!CL:0000049;2.15e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.33e-30!102;UBERON:0003061!8.33e-30!102;UBERON:0002193!1.44e-27!112;UBERON:0002371!4.01e-19!80;UBERON:0001474!1.81e-17!86;UBERON:0003081!1.19e-14!216;UBERON:0007023!1.58e-14!115;UBERON:0002384!1.24e-13!375;UBERON:0004765!8.34e-13!101;UBERON:0001434!8.34e-13!101;UBERON:0002405!1.03e-12!115;UBERON:0000178!1.02e-09!15;UBERON:0000179!1.02e-09!15;UBERON:0000463!1.02e-09!15;UBERON:0002204!3.48e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!8.33e-30!102;UBERON:0003061!8.33e-30!102;UBERON:0002193!1.44e-27!112;UBERON:0002371!4.01e-19!80;UBERON:0001474!1.81e-17!86;UBERON:0003081!1.19e-14!216;UBERON:0007023!1.58e-14!115;UBERON:0002384!1.24e-13!375;UBERON:0004765!8.34e-13!101;UBERON:0001434!8.34e-13!101;UBERON:0002405!1.03e-12!115;UBERON:0000178!1.02e-09!15;UBERON:0000179!1.02e-09!15;UBERON:0000463!1.02e-09!15;UBERON:0002204!3.48e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.68e-11;15!UBERON:0000179;3.68e-11;15!UBERON:0000463;3.68e-11;15!UBERON:0002390;1.00e-10;32 | |||
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|phase1_expression=0.726713517082227,0,0.986680828671798,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,2.6893005858071,1.80808358407193,0.730310090387373,1.95173119516203,0.123121058076788,0.408001382488506,0,0,0,0,6.265899271332,6.32174538764582,6.29686250509434,75.9193054318385,126.279871973983,41.8003532953405,0,0,0,0.309868802321207,0,2.64240395401362,19.3898392986157,40.5099783889686,35.3727719266838,1.56740831967947,9.06902264853143,1.80302897343931,19.7741604740208,19.6495490718181,9.94594650870046,18.8267519893605,21.7918980651568,11.7688420940139,19.8507750702284,21.2613386419154,17.4996850117553,27.2349087781929,18.719055823931,8.12558919566051,29.7422896477315,32.7487380069415,19.7756666311674,35.5057315150247,44.2882057365009,29.4095077867559,10.5552416059749,21.143147707893,11.9342930149154,13.3496249769149,8.5107783703671,4.9825779919646,23.1148772036204,25.0311800841697,22.370451004627,18.1619850790011,20.2552699793161,11.7091083353127,6.5489138756702,4.03948169933583,5.03180749220102,21.1177826555411,11.863974534479,9.16135844173357,4.27519115611873,1.59133341759272,2.19196984517561,0,1.63841583378639,0.889509253863555,2.13365111283254,0.400395987036012,0,0.661044872784862,0.954053754535364,1.1384259382189,8.80855784056408,7.64546456250458,10.5737062863221,42.0381422236152,0.526768169550154,60.7833189651744,58.5586036496255,65.9980811788425,38.6200804352466,103.643280789482,95.6364567584161,52.6032166701361,76.7618047938846,151.132830534591,107.443938873056,101.551448911881,39.1959438360566,51.243382938592,33.7097704437536,41.1761526500914,47.5277060605486,103.65230765028,100.327810533642,51.2224066644386,47.1366865621875,84.3085085924227,83.8450966977617,105.256191880113,49.6962046345591,57.2953439393648,57.0271226669025,39.751831436532,46.7151130713627,66.2132850727433,48.0657821649354,66.5113677506048,120.359225705165,144.952586114661,82.4050858093126,0,0,0.255725123687061,0.361439152384566,0,0.724232594804119,0,0.973269740605272,0.189069634328136,0.221729397462564,0.790513071238134,5.95954793514592,0,0,1.29818957461873,1.21890816109487,0.664789802594326,7.63169997777094,5.14795419702115,7.05769252526173,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.535798369704479,0,0.900891843866578,0,0,0.366403487860815,114.648963169375,81.4338554711483,0,2.48485975847659,0,1.45650098894541,0.573673241497627,1.41867352879343,1.12135520028461,0,1.48000529050296,0.311211035399766,0.808264032418128,0.490385709340376,0,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0.280901613404497,0.204154171254893,0,0,0,0.741800787835671,1.82032272387605,1.43723628363248,0,0,0.277064115484183,0.438977620880838,0.612975591598039,1.65261864797256,1.24775401476023,4.84352016359927,0,0.847727604638247,5.70173082560364,0.515262646192195,2.83404594050192,0.744467425326359,16.0337515629203,6.13853132515551,3.78650661366172,0.276149695926898,0.161646056818812,10.6502877754984,3.82857973265033,2.20428770003634,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,1.96973604869918,2.80805118167085,3.41851673264075,0,0,0,0,0,0,50.7443135032822,17.6096868026452,189.497897604266,117.746001941657,26.1321837192606,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,1.79409734952577,0.43596006883328,2.27348686044945,0,0,0.845302752556,0.531876233169741,2.08014873822732,0,0,0,0.57191197463259,0,0,2.28015329005615,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0.718874566474748,0,2.85273810081437,1.30303176000821,0.410952645100767,1.96967059563885,30.7113294542265,141.665116585186,142.529826982141,128.856408424867,0,0,0,0.167516265334349,0,122.837151927338,59.832291840805,91.1714129559278,0,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0.664225598535437,2.02806085395873,0,0.195801157462741,0,62.2371758629891,62.5571182373989,60.301070158946,0,0,0,0.992431231275107,1.07423381301644,0.280660094433074,2.17836553734692,0.511707249066704,0.321707842287215,0,1.23367755042124,0.710246901252508,1.47828880824856,1.03850885836724,2.20799719073923,0,0,0,0.114814448164607,0,0,1.80479845162965,2.84956747286335,0.784349769176855,2.92278449306521,3.69430701125065,0,3.40187410553031,0.647747748306418,0,0.812839312631559,1.00337954770971,9.94017464875649,7.47968408035852,3.1342465661105,0.219259876645935,0.784306353074702,0,0,0,2.57602529119306,1.55668090191184,3.71292749642646,0,0,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.852266274161009,0,0,0,0,0,4.64845549297286,10.3888074454111,3.485186350803,3.69640296211307,2.12922412126809,3.47973196830029,2.22389062924704,0.715624433709956,1.86079184679834,0.632758849437452,0.190630193923825,1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| ||
|short_description=p1@SYTL3 | |short_description=p1@SYTL3 | ||
}} | }} |
Latest revision as of 12:03, 16 September 2015
Short description: | p1@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYTL3_5end |
Coexpression cluster: | C4200_Mast_immature_CD4_Natural_CD8_Basophils_hairy |
Association with transcript: | 0bp_to_ENST00000360448, ENST00000469735, ENST00000543689, NM_001009991, NM_001242384, NM_001242394, NM_001242395, uc003qro.2, uc011efp.1_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | F5H278B4E2A9Q4VX76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.07e-36 | 98 |
blood island | 3.07e-36 | 98 |
hemolymphoid system | 3.92e-33 | 108 |
immune system | 7.31e-24 | 93 |
bone marrow | 1.96e-23 | 76 |
bone element | 6.67e-22 | 82 |
skeletal element | 1.57e-17 | 90 |
skeletal system | 3.53e-14 | 100 |
lateral plate mesoderm | 2.94e-12 | 203 |
connective tissue | 7.84e-12 | 371 |
blood | 3.85e-11 | 15 |
haemolymphatic fluid | 3.85e-11 | 15 |
organism substance | 3.85e-11 | 15 |
adult organism | 1.63e-10 | 114 |