FFCP PHASE1:Hg19::chr6:151042126..151042135,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57480 | |EntrezGene=57480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20884 | |HGNC=20884 | ||
|TSSclassifier=strong | |||
|UniProt=F5H346 | |UniProt=F5H346 | ||
|association_with_transcript=57bp_to_ENST00000535018,uc003qnz.2_5end | |association_with_transcript=57bp_to_ENST00000535018,uc003qnz.2_5end | ||
|cluster_id=chr6:151042126..151042135,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_21_at_PLEKHG1_5end | |description=CAGE_peak_21_at_PLEKHG1_5end | ||
|id=chr6:151042126..151042135,+ | |id=chr6:151042126..151042135,+ | ||
|ontology_enrichment_celltype=CL:0002605!5.99e-07!3 | |ontology_enrichment_celltype=CL:0002605!5.99e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.10e-50;1!UBERON:0003056;8.69e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.16e-68!57;UBERON:0005068!1.16e-68!57;UBERON:0006241!1.16e-68!57;UBERON:0007135!1.16e-68!57;UBERON:0001017!9.09e-59!82;UBERON:0000955!1.51e-58!69;UBERON:0006238!1.51e-58!69;UBERON:0002616!2.82e-57!59;UBERON:0005743!9.44e-56!86;UBERON:0000073!3.08e-53!94;UBERON:0001016!3.08e-53!94;UBERON:0002780!2.11e-51!41;UBERON:0001890!2.11e-51!41;UBERON:0006240!2.11e-51!41;UBERON:0003080!4.45e-50!42;UBERON:0003075!1.20e-49!86;UBERON:0007284!1.20e-49!86;UBERON:0002346!3.84e-47!90;UBERON:0002020!1.34e-46!34;UBERON:0003528!1.34e-46!34;UBERON:0001893!1.81e-46!34;UBERON:0002791!3.55e-43!33;UBERON:0001869!2.35e-39!32;UBERON:0003056!3.21e-36!61;UBERON:0007023!6.46e-36!115;UBERON:0000033!1.32e-34!123;UBERON:0000153!1.13e-32!129;UBERON:0007811!1.13e-32!129;UBERON:0004121!1.88e-28!169;UBERON:0000924!1.26e-27!173;UBERON:0006601!1.26e-27!173;UBERON:0000956!6.15e-26!25;UBERON:0000203!6.15e-26!25;UBERON:0002308!1.94e-24!9;UBERON:0000125!1.94e-24!9;UBERON:0002298!4.15e-21!8;UBERON:0002619!5.10e-21!22;UBERON:0001950!4.27e-19!20;UBERON:0003076!7.39e-19!15;UBERON:0003057!7.39e-19!15;UBERON:0002420!5.18e-18!9;UBERON:0007245!5.18e-18!9;UBERON:0010009!5.18e-18!9;UBERON:0010011!5.18e-18!9;UBERON:0000454!5.18e-18!9;UBERON:0004732!4.41e-17!13;UBERON:0009663!2.31e-16!7;UBERON:0000025!1.83e-15!194;UBERON:0006331!5.44e-15!3;UBERON:0000988!6.25e-15!3;UBERON:0004733!1.09e-13!12;UBERON:0002028!1.09e-13!12;UBERON:0007277!1.09e-13!12;UBERON:0004111!4.12e-11!241;UBERON:0005162!8.28e-11!2;UBERON:0000122!8.28e-11!2;UBERON:0000369!1.19e-10!4;UBERON:0002435!1.19e-10!4;UBERON:0000204!1.19e-10!4;UBERON:0010082!1.19e-10!4;UBERON:0001897!1.68e-10!2;UBERON:0002148!1.93e-10!2;UBERON:0009662!1.93e-10!2;UBERON:0000477!5.93e-10!286;UBERON:0000483!1.79e-09!309;UBERON:0000119!2.60e-09!312;UBERON:0000475!3.90e-09!365;UBERON:0000064!8.36e-09!219;UBERON:0001872!9.76e-09!5;UBERON:0000349!1.34e-08!5;UBERON:0002680!1.54e-08!9;UBERON:0001895!1.54e-08!9;UBERON:0010092!1.54e-08!9;UBERON:0002021!1.57e-08!5;UBERON:0001896!2.33e-07!3;UBERON:0005290!2.33e-07!3;UBERON:0010096!2.33e-07!3;UBERON:0002240!4.30e-07!3;UBERON:0005383!4.30e-07!3;UBERON:0005382!4.30e-07!3;UBERON:0000200!4.98e-07!6 | |ontology_enrichment_uberon=UBERON:0001049!1.16e-68!57;UBERON:0005068!1.16e-68!57;UBERON:0006241!1.16e-68!57;UBERON:0007135!1.16e-68!57;UBERON:0001017!9.09e-59!82;UBERON:0000955!1.51e-58!69;UBERON:0006238!1.51e-58!69;UBERON:0002616!2.82e-57!59;UBERON:0005743!9.44e-56!86;UBERON:0000073!3.08e-53!94;UBERON:0001016!3.08e-53!94;UBERON:0002780!2.11e-51!41;UBERON:0001890!2.11e-51!41;UBERON:0006240!2.11e-51!41;UBERON:0003080!4.45e-50!42;UBERON:0003075!1.20e-49!86;UBERON:0007284!1.20e-49!86;UBERON:0002346!3.84e-47!90;UBERON:0002020!1.34e-46!34;UBERON:0003528!1.34e-46!34;UBERON:0001893!1.81e-46!34;UBERON:0002791!3.55e-43!33;UBERON:0001869!2.35e-39!32;UBERON:0003056!3.21e-36!61;UBERON:0007023!6.46e-36!115;UBERON:0000033!1.32e-34!123;UBERON:0000153!1.13e-32!129;UBERON:0007811!1.13e-32!129;UBERON:0004121!1.88e-28!169;UBERON:0000924!1.26e-27!173;UBERON:0006601!1.26e-27!173;UBERON:0000956!6.15e-26!25;UBERON:0000203!6.15e-26!25;UBERON:0002308!1.94e-24!9;UBERON:0000125!1.94e-24!9;UBERON:0002298!4.15e-21!8;UBERON:0002619!5.10e-21!22;UBERON:0001950!4.27e-19!20;UBERON:0003076!7.39e-19!15;UBERON:0003057!7.39e-19!15;UBERON:0002420!5.18e-18!9;UBERON:0007245!5.18e-18!9;UBERON:0010009!5.18e-18!9;UBERON:0010011!5.18e-18!9;UBERON:0000454!5.18e-18!9;UBERON:0004732!4.41e-17!13;UBERON:0009663!2.31e-16!7;UBERON:0000025!1.83e-15!194;UBERON:0006331!5.44e-15!3;UBERON:0000988!6.25e-15!3;UBERON:0004733!1.09e-13!12;UBERON:0002028!1.09e-13!12;UBERON:0007277!1.09e-13!12;UBERON:0004111!4.12e-11!241;UBERON:0005162!8.28e-11!2;UBERON:0000122!8.28e-11!2;UBERON:0000369!1.19e-10!4;UBERON:0002435!1.19e-10!4;UBERON:0000204!1.19e-10!4;UBERON:0010082!1.19e-10!4;UBERON:0001897!1.68e-10!2;UBERON:0002148!1.93e-10!2;UBERON:0009662!1.93e-10!2;UBERON:0000477!5.93e-10!286;UBERON:0000483!1.79e-09!309;UBERON:0000119!2.60e-09!312;UBERON:0000475!3.90e-09!365;UBERON:0000064!8.36e-09!219;UBERON:0001872!9.76e-09!5;UBERON:0000349!1.34e-08!5;UBERON:0002680!1.54e-08!9;UBERON:0001895!1.54e-08!9;UBERON:0010092!1.54e-08!9;UBERON:0002021!1.57e-08!5;UBERON:0001896!2.33e-07!3;UBERON:0005290!2.33e-07!3;UBERON:0010096!2.33e-07!3;UBERON:0002240!4.30e-07!3;UBERON:0005383!4.30e-07!3;UBERON:0005382!4.30e-07!3;UBERON:0000200!4.98e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;3.10e-50;1!UBERON:0000941;3.10e-50;1!UBERON:0001785;3.10e-50;1!UBERON:0002464;3.10e-50;1!UBERON:0004904;3.10e-50;1!UBERON:0001021;3.10e-50;1!UBERON:0009661;3.10e-50;1!UBERON:0002950;3.10e-50;1!UBERON:0001891;3.10e-50;1!UBERON:0003714;6.30e-26;2!UBERON:0005162;6.30e-26;2!UBERON:0000122;6.30e-26;2!UBERON:0009663;2.11e-08;7!UBERON:0002420;8.14e-07;9!UBERON:0000125;8.14e-07;9!UBERON:0007245;8.14e-07;9!UBERON:0002308;8.14e-07;9!UBERON:0010009;8.14e-07;9!UBERON:0000010;8.14e-07;8!UBERON:0010011;8.14e-07;9!UBERON:0000454;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.99e-50,1;UBERON:0001785,3.99e-50,1;UBERON:0002464,3.99e-50,1;UBERON:0004904,3.99e-50,1;UBERON:0001021,3.99e-50,1;UBERON:0003902,3.99e-50,1;UBERON:0005425,3.99e-50,1;UBERON:0002038,6.58e-50,1;UBERON:0009661,6.58e-50,1;UBERON:0002950,6.58e-50,1;UBERON:0001891,6.58e-50,1;UBERON:0009616,6.58e-50,1;UBERON:0010286,6.58e-50,1;UBERON:0003714,7.14e-26,2;UBERON:0005162,7.14e-26,2;UBERON:0000122,7.14e-26,2;UBERON:0001781,1.13e-13,4;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0009663,2.35e-08,7;UBERON:0000010,8.37e-07,8;UBERON:0002420,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0007245,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0010009,8.85e-07,9;UBERON:0010011,8.85e-07,9;UBERON:0000454,8.85e-07,9 | |||
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|short_description=p21@PLEKHG1 | |short_description=p21@PLEKHG1 | ||
}} | }} |
Latest revision as of 04:09, 16 September 2015
Short description: | p21@PLEKHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_PLEKHG1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 57bp_to_ENST00000535018, uc003qnz.2_5end |
EntrezGene: | PLEKHG1 |
HGNC: | 20884 |
UniProt: | F5H346 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.99e-50 | 1 |
cranial nerve | 3.99e-50 | 1 |
nerve trunk | 3.99e-50 | 1 |
nerve connecting eye with brain | 3.99e-50 | 1 |
nerve | 3.99e-50 | 1 |
retinal neural layer | 3.99e-50 | 1 |
presumptive neural retina | 3.99e-50 | 1 |
substantia nigra | 6.58e-50 | 1 |
midbrain nucleus | 6.58e-50 | 1 |
regional part of midbrain | 6.58e-50 | 1 |
midbrain | 6.58e-50 | 1 |
presumptive midbrain | 6.58e-50 | 1 |
midbrain neural tube | 6.58e-50 | 1 |
neural tissue | 7.14e-26 | 2 |
multi cell component structure | 7.14e-26 | 2 |
neuron projection bundle | 7.14e-26 | 2 |
layer of retina | 1.13e-13 | 4 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
telencephalic nucleus | 2.35e-08 | 7 |
peripheral nervous system | 8.37e-07 | 8 |
basal ganglion | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nuclear complex of neuraxis | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
aggregate regional part of brain | 8.85e-07 | 9 |
collection of basal ganglia | 8.85e-07 | 9 |
cerebral subcortex | 8.85e-07 | 9 |