FFCP PHASE1:Hg19::chr19:40854417..40854454,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:40854417..40854454,-
|short_description=p3@C19orf47
|description=CAGE_peak_3_at_C19orf47_5end
|association_with_transcript=0bp_to_ENST00000357884,uc002oni...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126526 | |EntrezGene=126526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26723 | |HGNC=26723 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9M1 | |UniProt=Q8N9M1 | ||
|association_with_transcript=0bp_to_ENST00000357884,uc002oni.3_5end | |||
|cluster_id=chr19:40854417..40854454,- | |||
|description=CAGE_peak_3_at_C19orf47_5end | |||
|id=chr19:40854417..40854454,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.24e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.98e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-13!115;UBERON:0001049!5.68e-11!57;UBERON:0005068!5.68e-11!57;UBERON:0006241!5.68e-11!57;UBERON:0007135!5.68e-11!57;UBERON:0005743!4.80e-10!86;UBERON:0001017!1.01e-09!82;UBERON:0000073!2.11e-09!94;UBERON:0001016!2.11e-09!94;UBERON:0003080!6.48e-09!42;UBERON:0003075!9.05e-09!86;UBERON:0007284!9.05e-09!86;UBERON:0002346!9.67e-09!90;UBERON:0002780!1.48e-08!41;UBERON:0001890!1.48e-08!41;UBERON:0006240!1.48e-08!41;UBERON:0002616!2.28e-08!59;UBERON:0000955!3.14e-08!69;UBERON:0006238!3.14e-08!69;UBERON:0001893!1.75e-07!34;UBERON:0002020!2.73e-07!34;UBERON:0003528!2.73e-07!34;UBERON:0003056!4.02e-07!61;UBERON:0002791!5.21e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.88e-08;53!UBERON:0002616;1.88e-08;53!UBERON:0002780;3.84e-08;41!UBERON:0001890;3.84e-08;41!UBERON:0003528;4.67e-08;34!UBERON:0002020;4.67e-08;34!UBERON:0002619;4.72e-08;22!UBERON:0001893;7.70e-08;34!UBERON:0001869;2.47e-07;32!UBERON:0002791;3.63e-07;32!UBERON:0001950;6.33e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.41e-13,56;UBERON:0005068,1.41e-13,56;UBERON:0006241,1.41e-13,56;UBERON:0007135,1.41e-13,56;UBERON:0007023,1.59e-13,114;UBERON:0000073,6.36e-13,53;UBERON:0002616,6.36e-13,53;UBERON:0001017,6.77e-11,81;UBERON:0002780,9.36e-11,41;UBERON:0001890,9.36e-11,41;UBERON:0003080,9.36e-11,41;UBERON:0006240,9.36e-11,41;UBERON:0001016,9.72e-11,89;UBERON:0001893,1.09e-10,34;UBERON:0003075,1.16e-10,82;UBERON:0007284,1.16e-10,82;UBERON:0003528,2.27e-10,34;UBERON:0002020,2.27e-10,34;UBERON:0002346,2.57e-10,86;UBERON:0001869,2.65e-09,32;UBERON:0000955,2.86e-09,68;UBERON:0006238,2.86e-09,68;UBERON:0002791,3.11e-09,32;UBERON:0002619,1.92e-08,22;UBERON:0003056,5.41e-08,61;UBERON:0001950,2.73e-07,20;UBERON:0000956,6.07e-07,25;UBERON:0000203,6.07e-07,25;UBERON:0010314,7.65e-07,132 | |||
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| ||
|short_description=p3@C19orf47 | |||
}} | }} |
Latest revision as of 01:42, 18 September 2015
Short description: | p3@C19orf47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C19orf47_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357884, uc002oni.3_5end |
EntrezGene: | C19orf47 |
HGNC: | 26723 |
UniProt: | Q8N9M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.98e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.41e-13 | 56 |
neural rod | 1.41e-13 | 56 |
future spinal cord | 1.41e-13 | 56 |
neural keel | 1.41e-13 | 56 |
adult organism | 1.59e-13 | 114 |
regional part of nervous system | 6.36e-13 | 53 |
regional part of brain | 6.36e-13 | 53 |
central nervous system | 6.77e-11 | 81 |
regional part of forebrain | 9.36e-11 | 41 |
forebrain | 9.36e-11 | 41 |
anterior neural tube | 9.36e-11 | 41 |
future forebrain | 9.36e-11 | 41 |
nervous system | 9.72e-11 | 89 |
telencephalon | 1.09e-10 | 34 |
neural plate | 1.16e-10 | 82 |
presumptive neural plate | 1.16e-10 | 82 |
brain grey matter | 2.27e-10 | 34 |
gray matter | 2.27e-10 | 34 |
neurectoderm | 2.57e-10 | 86 |
cerebral hemisphere | 2.65e-09 | 32 |
brain | 2.86e-09 | 68 |
future brain | 2.86e-09 | 68 |
regional part of telencephalon | 3.11e-09 | 32 |
regional part of cerebral cortex | 1.92e-08 | 22 |
pre-chordal neural plate | 5.41e-08 | 61 |
neocortex | 2.73e-07 | 20 |
cerebral cortex | 6.07e-07 | 25 |
pallium | 6.07e-07 | 25 |
structure with developmental contribution from neural crest | 7.65e-07 | 132 |