FFCP PHASE1:Hg19::chr6:118880085..118880101,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5350 | |EntrezGene=5350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=9080 | |HGNC=9080 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_AB464652,DQ893034,DQ896146_5end | |association_with_transcript=1bp_to_AB464652,DQ893034,DQ896146_5end | ||
|cluster_id=chr6:118880085..118880101,+ | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_4_at_PLN_5end | |description=CAGE_peak_4_at_PLN_5end | ||
|id=chr6:118880085..118880101,+ | |id=chr6:118880085..118880101,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.53e-21;1!UBERON:0010226;1.88e-21;1!UBERON:0004140;2.82e-21;1!UBERON:0004874;6.31e-21;1!UBERON:0005062;9.45e-21;4!UBERON:0007284;9.45e-21;4!UBERON:0008814;3.70e-11;2!UBERON:0010056;3.70e-11;2 | |||
|ontology_enrichment_disease=DOID:114!6.73e-09!2 | |ontology_enrichment_disease=DOID:114!6.73e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-37!115;UBERON:0007100!3.01e-13!27;UBERON:0003103!6.05e-11!69;UBERON:0003135!7.73e-09!11;UBERON:0000948!1.75e-07!24;UBERON:0005498!1.75e-07!24;UBERON:0004140!1.75e-07!24;UBERON:0009881!1.75e-07!24;UBERON:0004141!1.75e-07!24;UBERON:0003084!1.75e-07!24;UBERON:0007005!1.75e-07!24;UBERON:0004139!1.75e-07!24;UBERON:0004291!1.75e-07!24 | |ontology_enrichment_uberon=UBERON:0007023!1.22e-37!115;UBERON:0007100!3.01e-13!27;UBERON:0003103!6.05e-11!69;UBERON:0003135!7.73e-09!11;UBERON:0000948!1.75e-07!24;UBERON:0005498!1.75e-07!24;UBERON:0004140!1.75e-07!24;UBERON:0009881!1.75e-07!24;UBERON:0004141!1.75e-07!24;UBERON:0003084!1.75e-07!24;UBERON:0007005!1.75e-07!24;UBERON:0004139!1.75e-07!24;UBERON:0004291!1.75e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.28e-28;25!UBERON:0004151;8.12e-28;3!UBERON:0003978;2.72e-27;3!UBERON:0000946;2.72e-27;3!UBERON:0000948;8.35e-23;22!UBERON:0002079;1.53e-21;1!UBERON:0002084;1.88e-21;1!UBERON:0002082;1.88e-21;1!UBERON:0002135;2.82e-21;1!UBERON:0000989;6.31e-21;1!UBERON:0002146;6.31e-21;1!UBERON:0008811;6.31e-21;1!UBERON:0005623;6.31e-21;1!UBERON:0002081;1.82e-11;2!UBERON:0002133;2.47e-11;2!UBERON:0000341;3.70e-11;2!UBERON:0010313;6.80e-09;10!UBERON:0001723;7.26e-08;3!UBERON:0001033;7.26e-08;3!UBERON:0003103;5.97e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,8.12e-28,3;UBERON:0003978,2.38e-27,3;UBERON:0009751,2.38e-27,3;UBERON:0000946,2.38e-27,3;UBERON:0002523,2.38e-27,3;UBERON:0005983,2.38e-27,3;UBERON:0002165,2.38e-27,3;UBERON:0002062,2.38e-27,3;UBERON:0007280,2.38e-27,3;UBERON:0007100,1.59e-26,27;UBERON:0002079,1.53e-21,1;UBERON:0002084,1.88e-21,1;UBERON:0002082,1.88e-21,1;UBERON:0010226,1.88e-21,1;UBERON:0002135,2.82e-21,1;UBERON:0000989,4.22e-21,1;UBERON:0008811,4.22e-21,1;UBERON:0006258,4.22e-21,1;UBERON:0005876,4.22e-21,1;UBERON:0004874,4.22e-21,1;UBERON:0002146,5.16e-21,1;UBERON:0005623,5.16e-21,1;UBERON:0000948,6.32e-21,24;UBERON:0005498,6.32e-21,24;UBERON:0004140,6.32e-21,24;UBERON:0009881,6.32e-21,24;UBERON:0004141,6.32e-21,24;UBERON:0003084,6.32e-21,24;UBERON:0007005,6.32e-21,24;UBERON:0004139,6.32e-21,24;UBERON:0004291,6.32e-21,24;UBERON:0003103,3.86e-14,68;UBERON:0004797,2.51e-12,7;UBERON:0002081,1.82e-11,2;UBERON:0010227,1.82e-11,2;UBERON:0002133,2.47e-11,2;UBERON:0000341,3.70e-11,2;UBERON:0007023,8.11e-11,114;UBERON:0010313,6.54e-09,10;UBERON:0002342,6.54e-09,10;UBERON:0005062,6.54e-09,10;UBERON:0001723,7.76e-08,3;UBERON:0001033,7.76e-08,3;UBERON:0010056,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,1.60412296808179,0,0.599037001496973,0.429226048136571,2.90122894674434,2.41860500952215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,12.1498205483472,7.94510364438518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21319294033318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.923965261706223,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.757786982182394,0.267964130156178,0,0,1.49263787330687,0,0,0,0,0,0,1.30630048738177,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,1.60412296808179,0,0.599037001496973,0.429226048136571,2.90122894674434,2.41860500952215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,12.1498205483472,7.94510364438518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21319294033318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.923965261706223,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.757786982182394,0.267964130156178,0,0,1.49263787330687,0,0,0,0,0,0,1.30630048738177,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | ||
|short_description=p4@PLN | |short_description=p4@PLN | ||
}} | }} |
Latest revision as of 02:41, 20 September 2015
Short description: | p4@PLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLN_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | 1bp_to_AB464652, DQ893034, DQ896146_5end |
EntrezGene: | PLN |
HGNC: | 9080 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 4.52e-11 | 2 |