FFCP PHASE1:Hg19::chr5:95066823..95066879,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22836 | |EntrezGene=22836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |HGNC=18757 | ||
|TSSclassifier=strong | |||
|UniProt=O94955,D6RG10 | |UniProt=O94955,D6RG10 | ||
|association_with_transcript=0bp_to_ENST00000379982,ENST00000506817,NM_014899,uc003kll.2,uc003klm.2_5end | |association_with_transcript=0bp_to_ENST00000379982,ENST00000506817,NM_014899,uc003kll.2,uc003klm.2_5end | ||
|cluster_id=chr5:95066823..95066879,+ | |||
|coexpression_cluster_id=C1085 | |coexpression_cluster_id=C1085 | ||
|description=CAGE_peak_2_at_RHOBTB3_5end | |description=CAGE_peak_2_at_RHOBTB3_5end | ||
|id=chr5:95066823..95066879,+ | |id=chr5:95066823..95066879,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.50e-17!180;CL:0000680!6.42e-11!57;CL:0000056!6.42e-11!57;CL:0000355!6.42e-11!57;CL:0000187!1.28e-10!54;CL:0000183!1.98e-09!59;CL:0000393!9.25e-09!60;CL:0000211!9.25e-09!60;CL:0000192!2.92e-08!42;CL:0000514!2.92e-08!42;CL:0000057!9.66e-08!75;CL:0000222!1.09e-07!119;CL:0000136!1.79e-07!15 | |ontology_enrichment_celltype=CL:0000055!8.50e-17!180;CL:0000680!6.42e-11!57;CL:0000056!6.42e-11!57;CL:0000355!6.42e-11!57;CL:0000187!1.28e-10!54;CL:0000183!1.98e-09!59;CL:0000393!9.25e-09!60;CL:0000211!9.25e-09!60;CL:0000192!2.92e-08!42;CL:0000514!2.92e-08!42;CL:0000057!9.66e-08!75;CL:0000222!1.09e-07!119;CL:0000136!1.79e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.32e-07;13!CL:0000187;5.88e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.31e-11,58;CL:0000056,2.31e-11,58;CL:0000355,2.31e-11,58;CL:0000187,4.63e-11,55;CL:0000393,3.31e-09,61;CL:0000211,3.31e-09,61;CL:0000192,1.12e-08,43;CL:0000514,1.12e-08,43;CL:0000222,5.58e-08,121;CL:0000057,6.00e-08,76;CL:0000136,1.63e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.69e-21!347;UBERON:0000475!9.67e-21!365;UBERON:0000477!3.62e-17!286;UBERON:0000483!4.36e-16!309;UBERON:0000119!4.79e-16!312;UBERON:0004111!1.63e-14!241;UBERON:0000468!2.24e-13!659;UBERON:0005256!2.07e-12!143;UBERON:0000025!6.85e-12!194;UBERON:0001134!2.84e-11!61;UBERON:0002036!2.84e-11!61;UBERON:0003082!2.84e-11!61;UBERON:0002385!4.98e-11!63;UBERON:0001015!4.98e-11!63;UBERON:0000383!4.98e-11!63;UBERON:0000490!1.16e-10!138;UBERON:0002100!2.91e-10!216;UBERON:0000914!3.42e-10!83;UBERON:0002329!3.42e-10!83;UBERON:0003077!3.42e-10!83;UBERON:0003059!3.42e-10!83;UBERON:0007282!3.42e-10!83;UBERON:0009618!3.42e-10!83;UBERON:0007285!3.42e-10!83;UBERON:0000467!3.88e-10!625;UBERON:0002050!5.02e-10!605;UBERON:0005423!5.02e-10!605;UBERON:0000923!5.06e-10!604;UBERON:0005291!5.06e-10!604;UBERON:0006598!5.06e-10!604;UBERON:0002532!5.06e-10!604;UBERON:0000480!6.37e-10!626;UBERON:0000064!8.75e-10!219;UBERON:0004290!9.80e-10!70;UBERON:0000922!1.83e-09!612;UBERON:0003104!2.19e-09!238;UBERON:0009142!2.19e-09!238;UBERON:0000033!5.75e-09!123;UBERON:0003914!1.37e-08!118;UBERON:0000153!6.53e-08!129;UBERON:0007811!6.53e-08!129;UBERON:0004121!1.24e-07!169;UBERON:0000486!1.44e-07!82;UBERON:0000924!1.90e-07!173;UBERON:0006601!1.90e-07!173;UBERON:0000073!3.21e-07!94;UBERON:0001016!3.21e-07!94;UBERON:0004872!3.59e-07!84;UBERON:0000062!3.61e-07!511;UBERON:0005743!5.15e-07!86;UBERON:0003075!6.19e-07!86;UBERON:0007284!6.19e-07!86 | |ontology_enrichment_uberon=UBERON:0000481!2.69e-21!347;UBERON:0000475!9.67e-21!365;UBERON:0000477!3.62e-17!286;UBERON:0000483!4.36e-16!309;UBERON:0000119!4.79e-16!312;UBERON:0004111!1.63e-14!241;UBERON:0000468!2.24e-13!659;UBERON:0005256!2.07e-12!143;UBERON:0000025!6.85e-12!194;UBERON:0001134!2.84e-11!61;UBERON:0002036!2.84e-11!61;UBERON:0003082!2.84e-11!61;UBERON:0002385!4.98e-11!63;UBERON:0001015!4.98e-11!63;UBERON:0000383!4.98e-11!63;UBERON:0000490!1.16e-10!138;UBERON:0002100!2.91e-10!216;UBERON:0000914!3.42e-10!83;UBERON:0002329!3.42e-10!83;UBERON:0003077!3.42e-10!83;UBERON:0003059!3.42e-10!83;UBERON:0007282!3.42e-10!83;UBERON:0009618!3.42e-10!83;UBERON:0007285!3.42e-10!83;UBERON:0000467!3.88e-10!625;UBERON:0002050!5.02e-10!605;UBERON:0005423!5.02e-10!605;UBERON:0000923!5.06e-10!604;UBERON:0005291!5.06e-10!604;UBERON:0006598!5.06e-10!604;UBERON:0002532!5.06e-10!604;UBERON:0000480!6.37e-10!626;UBERON:0000064!8.75e-10!219;UBERON:0004290!9.80e-10!70;UBERON:0000922!1.83e-09!612;UBERON:0003104!2.19e-09!238;UBERON:0009142!2.19e-09!238;UBERON:0000033!5.75e-09!123;UBERON:0003914!1.37e-08!118;UBERON:0000153!6.53e-08!129;UBERON:0007811!6.53e-08!129;UBERON:0004121!1.24e-07!169;UBERON:0000486!1.44e-07!82;UBERON:0000924!1.90e-07!173;UBERON:0006601!1.90e-07!173;UBERON:0000073!3.21e-07!94;UBERON:0001016!3.21e-07!94;UBERON:0004872!3.59e-07!84;UBERON:0000062!3.61e-07!511;UBERON:0005743!5.15e-07!86;UBERON:0003075!6.19e-07!86;UBERON:0007284!6.19e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@RHOBTB3 | |short_description=p2@RHOBTB3 | ||
}} | }} |
Latest revision as of 07:45, 19 September 2015
Short description: | p2@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RHOBTB3_5end |
Coexpression cluster: | C1085_liposarcoma_placenta_Olfactory_amniotic_Hair_mesothelioma_Smooth |
Association with transcript: | 0bp_to_ENST00000379982, ENST00000506817, NM_014899, uc003kll.2, uc003klm.2_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | O94955D6RG10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.31e-11 | 58 |
myoblast | 2.31e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.31e-11 | 58 |
muscle cell | 4.63e-11 | 55 |
electrically responsive cell | 3.31e-09 | 61 |
electrically active cell | 3.31e-09 | 61 |
smooth muscle cell | 1.12e-08 | 43 |
smooth muscle myoblast | 1.12e-08 | 43 |
mesodermal cell | 5.58e-08 | 121 |
fibroblast | 6.00e-08 | 76 |
fat cell | 1.63e-07 | 15 |