FFCP PHASE1:Hg19::chr5:73931110..73931127,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:73931110..73931127,- | |||
|coexpression_cluster_id=C1173 | |coexpression_cluster_id=C1173 | ||
|description=CAGE_peak_at_chr5:73931110..73931127,- | |description=CAGE_peak_at_chr5:73931110..73931127,- | ||
|id=chr5:73931110..73931127,- | |id=chr5:73931110..73931127,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.98e-11;6!CL:0000404;2.98e-11;6!CL:0002319;2.33e-09;25!CL:0000047;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.02e-18,8;CL:0000540,2.62e-11,6;CL:0000031,2.62e-11,6;CL:0000404,2.62e-11,6;CL:0002319,2.41e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.98e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!9.99e-18!25;UBERON:0000203!9.99e-18!25;UBERON:0001869!2.26e-16!32;UBERON:0001893!5.73e-15!34;UBERON:0002619!1.94e-14!22;UBERON:0002791!3.78e-14!33;UBERON:0002020!1.59e-13!34;UBERON:0003528!1.59e-13!34;UBERON:0001950!1.54e-12!20;UBERON:0002780!2.03e-12!41;UBERON:0001890!2.03e-12!41;UBERON:0006240!2.03e-12!41;UBERON:0003080!6.06e-12!42;UBERON:0001017!1.49e-10!82;UBERON:0005743!2.63e-10!86;UBERON:0000955!1.29e-08!69;UBERON:0006238!1.29e-08!69;UBERON:0000073!2.43e-08!94;UBERON:0001016!2.43e-08!94;UBERON:0003056!3.29e-08!61;UBERON:0002616!1.02e-07!59;UBERON:0001049!1.58e-07!57;UBERON:0005068!1.58e-07!57;UBERON:0006241!1.58e-07!57;UBERON:0007135!1.58e-07!57;UBERON:0000025!9.93e-07!194 | |ontology_enrichment_uberon=UBERON:0000956!9.99e-18!25;UBERON:0000203!9.99e-18!25;UBERON:0001869!2.26e-16!32;UBERON:0001893!5.73e-15!34;UBERON:0002619!1.94e-14!22;UBERON:0002791!3.78e-14!33;UBERON:0002020!1.59e-13!34;UBERON:0003528!1.59e-13!34;UBERON:0001950!1.54e-12!20;UBERON:0002780!2.03e-12!41;UBERON:0001890!2.03e-12!41;UBERON:0006240!2.03e-12!41;UBERON:0003080!6.06e-12!42;UBERON:0001017!1.49e-10!82;UBERON:0005743!2.63e-10!86;UBERON:0000955!1.29e-08!69;UBERON:0006238!1.29e-08!69;UBERON:0000073!2.43e-08!94;UBERON:0001016!2.43e-08!94;UBERON:0003056!3.29e-08!61;UBERON:0002616!1.02e-07!59;UBERON:0001049!1.58e-07!57;UBERON:0005068!1.58e-07!57;UBERON:0006241!1.58e-07!57;UBERON:0007135!1.58e-07!57;UBERON:0000025!9.93e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;9.38e-10;25!UBERON:0000203;9.38e-10;25!UBERON:0002771;3.71e-09;2!UBERON:0001893;8.00e-08;34!UBERON:0002791;1.74e-07;32!UBERON:0001869;1.74e-07;32!UBERON:0001950;3.31e-07;20!UBERON:0003528;7.91e-07;34!UBERON:0002020;7.91e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.45e-11,81;UBERON:0001016,4.99e-10,89;UBERON:0000956,9.61e-10,25;UBERON:0000203,9.61e-10,25;UBERON:0002771,3.71e-09,2;UBERON:0002791,9.96e-08,32;UBERON:0001869,9.96e-08,32;UBERON:0003528,2.67e-07,34;UBERON:0002020,2.67e-07,34;UBERON:0001893,2.67e-07,34;UBERON:0001950,3.21e-07,20 | |||
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| ||
|short_description=p@chr5:73931110..73931127,- | |short_description=p@chr5:73931110..73931127,- | ||
}} | }} |
Latest revision as of 16:15, 30 July 2015
Short description: | p@chr5:73931110..73931127, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:73931110..73931127, - |
Coexpression cluster: | C1173_medial_Neurons_parietal_temporal_medulloblastoma_occipital_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.02e-18 | 8 |
neuron | 2.62e-11 | 6 |
neuroblast | 2.62e-11 | 6 |
electrically signaling cell | 2.62e-11 | 6 |
neural cell | 2.41e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.45e-11 | 81 |
nervous system | 4.99e-10 | 89 |
cerebral cortex | 9.61e-10 | 25 |
pallium | 9.61e-10 | 25 |
middle temporal gyrus | 3.71e-09 | 2 |
regional part of telencephalon | 9.96e-08 | 32 |
cerebral hemisphere | 9.96e-08 | 32 |
brain grey matter | 2.67e-07 | 34 |
gray matter | 2.67e-07 | 34 |
telencephalon | 2.67e-07 | 34 |
neocortex | 3.21e-07 | 20 |