FFCP PHASE1:Hg19::chr5:63961948..63961959,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:63961948..63961959,- | |||
|coexpression_cluster_id=C1896 | |coexpression_cluster_id=C1896 | ||
|description=CAGE_peak_at_chr5:63961948..63961959,- | |description=CAGE_peak_at_chr5:63961948..63961959,- | ||
|id=chr5:63961948..63961959,- | |id=chr5:63961948..63961959,- | ||
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|ontology_enrichment_celltype_v019=CL:0002589;1.24e-15;2!CL:0000359;3.04e-13;32!CL:0002592;7.07e-11;3!CL:0002582;1.14e-10;3!CL:0000192;3.08e-10;43!CL:1000306;1.96e-08;4!CL:0002547;1.96e-08;4!CL:0002594;2.52e-08;4!CL:0002595;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,1.33e-15,2;CL:0000359,1.11e-14,32;CL:0000192,4.64e-11,43;CL:0000514,4.64e-11,43;CL:0002592,6.73e-11,3;CL:0002582,1.20e-10,3;CL:0000187,9.53e-09,55;CL:1000306,1.96e-08,4;CL:0002547,1.96e-08,4;CL:0002594,2.43e-08,4;CL:0000680,2.57e-08,58;CL:0000056,2.57e-08,58;CL:0000355,2.57e-08,58;CL:0000393,6.28e-08,61;CL:0000211,6.28e-08,61;CL:0002595,6.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;3.08e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr5:63961948..63961959,- | |short_description=p@chr5:63961948..63961959,- | ||
}} | }} |
Latest revision as of 15:42, 30 July 2015
Short description: | p@chr5:63961948..63961959, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:63961948..63961959, - |
Coexpression cluster: | C1896_Smooth_mesenchymal_heart_tongue_left_Fibroblast_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 1.33e-15 | 2 |
vascular associated smooth muscle cell | 1.11e-14 | 32 |
smooth muscle cell | 4.64e-11 | 43 |
smooth muscle myoblast | 4.64e-11 | 43 |
smooth muscle cell of the coronary artery | 6.73e-11 | 3 |
visceral preadipocyte | 1.20e-10 | 3 |
muscle cell | 9.53e-09 | 55 |
fibroblast of tunica adventitia of artery | 1.96e-08 | 4 |
fibroblast of the aortic adventitia | 1.96e-08 | 4 |
smooth muscle cell of the umbilical artery | 2.43e-08 | 4 |
muscle precursor cell | 2.57e-08 | 58 |
myoblast | 2.57e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-08 | 58 |
electrically responsive cell | 6.28e-08 | 61 |
electrically active cell | 6.28e-08 | 61 |
smooth muscle cell of the subclavian artery | 6.04e-07 | 5 |