FFCP PHASE1:Hg19::chr19:38397228..38397266,-: Difference between revisions
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|id=chr19:38397228..38397266,-
|short_description=p1@WDR87
|description=CAGE_peak_1_at_WDR87_5end
|association_with_transcript=0bp_to_ENST00000447313,ENST0000047332...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83889 | |EntrezGene=83889 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29934 | |HGNC=29934 | ||
|TSSclassifier=strong | |||
|UniProt=E7ESW6 | |UniProt=E7ESW6 | ||
|association_with_transcript=0bp_to_ENST00000447313,ENST00000473328_5end | |||
|cluster_id=chr19:38397228..38397266,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_WDR87_5end | |||
|id=chr19:38397228..38397266,- | |||
|ontology_enrichment_celltype=CL:1000449!5.84e-08!16;CL:0002681!4.86e-07!13;CL:0002584!4.86e-07!13;CL:1000497!5.42e-07!18;CL:0002518!5.42e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002188;4.06e-27;5!CL:1000449;2.19e-20;15!CL:1000746;1.04e-19;7!CL:1000612;1.04e-19;7!CL:1000497;4.30e-18;17!CL:0002518;4.30e-18;17!CL:0002681;6.00e-12;12!CL:0002584;6.00e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,4.06e-27,5;CL:1000449,2.19e-20,15;CL:1000746,1.04e-19,7;CL:1000612,1.04e-19,7;CL:1000497,4.30e-18,17;CL:0002518,4.30e-18,17;CL:0002681,6.00e-12,12;CL:0002584,6.00e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!5.84e-08!16;UBERON:0001285!5.84e-08!16;UBERON:0007684!5.84e-08!16;UBERON:0003220!5.84e-08!16;UBERON:0004208!5.84e-08!16;UBERON:0003887!1.07e-07!21;UBERON:0006555!1.90e-07!17;UBERON:0005103!1.90e-07!17;UBERON:0000083!1.90e-07!17;UBERON:0009201!1.90e-07!17;UBERON:0004819!1.90e-07!17;UBERON:0006553!1.90e-07!17;UBERON:0003074!1.90e-07!17;UBERON:0003060!1.90e-07!17;UBERON:0001225!4.86e-07!13;UBERON:0008987!4.86e-07!13;UBERON:0000080!5.42e-07!18;UBERON:0002120!5.42e-07!18;UBERON:0004875!5.42e-07!18;UBERON:0005721!5.42e-07!18;UBERON:0005754!5.42e-07!18;UBERON:0007297!5.42e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.19e-20;15!UBERON:0004819;2.19e-20;15!UBERON:0001285;2.19e-20;15!UBERON:0007684;2.19e-20;15!UBERON:0000074;1.04e-19;7!UBERON:0001229;1.04e-19;7!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0002113;4.65e-13;24!UBERON:0011143;4.65e-13;24!UBERON:0001225;6.00e-12;12!UBERON:0008987;6.00e-12;12!UBERON:0000489;6.10e-11;29!UBERON:0006554;1.33e-10;30!UBERON:0001008;1.33e-10;30!UBERON:0001851;9.24e-10;15!UBERON:0000353;9.24e-10;15!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.19e-20,15;UBERON:0009773,2.19e-20,15;UBERON:0001231,2.19e-20,15;UBERON:0001285,2.19e-20,15;UBERON:0007684,2.19e-20,15;UBERON:0004208,2.19e-20,15;UBERON:0010532,1.04e-19,7;UBERON:0000074,1.04e-19,7;UBERON:0001229,1.04e-19,7;UBERON:0001230,1.04e-19,7;UBERON:0003220,1.04e-19,7;UBERON:0005749,1.04e-19,7;UBERON:0004199,1.04e-19,7;UBERON:0004209,1.04e-19,7;UBERON:0004198,1.04e-19,7;UBERON:0006555,3.61e-19,16;UBERON:0004819,3.61e-19,16;UBERON:0000473,1.22e-17,8;UBERON:0005103,2.19e-17,8;UBERON:0000083,2.19e-17,8;UBERON:0009201,2.19e-17,8;UBERON:0006553,2.19e-17,8;UBERON:0003074,2.19e-17,8;UBERON:0003060,2.19e-17,8;UBERON:0000080,1.41e-15,9;UBERON:0002120,1.41e-15,9;UBERON:0004875,1.41e-15,9;UBERON:0005721,1.41e-15,9;UBERON:0005754,1.41e-15,9;UBERON:0007297,1.41e-15,9;UBERON:0003135,4.00e-13,11;UBERON:0004876,6.11e-13,11;UBERON:0002113,4.09e-12,26;UBERON:0003918,4.09e-12,26;UBERON:0011143,4.09e-12,26;UBERON:0005095,4.09e-12,26;UBERON:0007687,4.09e-12,26;UBERON:0001225,6.00e-12,12;UBERON:0008987,6.00e-12,12;UBERON:0003887,6.00e-12,12;UBERON:0003886,2.28e-10,54;UBERON:0000489,2.77e-10,31;UBERON:0001851,9.25e-10,15;UBERON:0000353,9.25e-10,15;UBERON:0002553,3.07e-09,61;UBERON:0000058,6.59e-08,19;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0006554,5.10e-07,47;UBERON:0001008,6.92e-07,48 | |||
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| ||
|short_description=p1@WDR87 | |||
}} | }} |
Latest revision as of 18:33, 17 September 2015
Short description: | p1@WDR87 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDR87_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000447313, ENST00000473328_5end |
EntrezGene: | WDR87 |
HGNC: | 29934 |
UniProt: | E7ESW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 4.06e-27 | 5 |
epithelial cell of nephron | 2.19e-20 | 15 |
glomerular cell | 1.04e-19 | 7 |
kidney corpuscule cell | 1.04e-19 | 7 |
kidney cell | 4.30e-18 | 17 |
kidney epithelial cell | 4.30e-18 | 17 |
kidney cortical cell | 6.00e-12 | 12 |
renal cortical epithelial cell | 6.00e-12 | 12 |