FFCP PHASE1:Hg19::chr5:150157847..150157859,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85027 | |EntrezGene=85027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30248 | |HGNC=30248 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_uc003lsw.2_5end | |association_with_transcript=-7bp_to_uc003lsw.2_5end | ||
|cluster_id=chr5:150157847..150157859,+ | |||
|coexpression_cluster_id=C2814 | |coexpression_cluster_id=C2814 | ||
|description=CAGE_peak_6_at_C5orf62_5end | |description=CAGE_peak_6_at_C5orf62_5end | ||
|id=chr5:150157847..150157859,+ | |id=chr5:150157847..150157859,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.94e-13!32;CL:0000192!2.83e-11!42;CL:0000514!2.83e-11!42;CL:0000680!1.94e-10!57;CL:0000056!1.94e-10!57;CL:0000355!1.94e-10!57;CL:0000187!2.10e-09!54;CL:0000183!5.84e-09!59;CL:0000393!7.55e-08!60;CL:0000211!7.55e-08!60;CL:0002594!2.14e-07!4;CL:0002494!5.63e-07!16 | |ontology_enrichment_celltype=CL:0000359!1.94e-13!32;CL:0000192!2.83e-11!42;CL:0000514!2.83e-11!42;CL:0000680!1.94e-10!57;CL:0000056!1.94e-10!57;CL:0000355!1.94e-10!57;CL:0000187!2.10e-09!54;CL:0000183!5.84e-09!59;CL:0000393!7.55e-08!60;CL:0000211!7.55e-08!60;CL:0002594!2.14e-07!4;CL:0002494!5.63e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.35e-26;32!CL:0002595;1.10e-14;5!CL:0000192;2.15e-14;43!CL:0002539;1.19e-12;10!CL:0002582;3.41e-11;3!CL:0000187;3.02e-09;55!CL:0002594;1.30e-08;4!CL:0000393;2.61e-07;61!CL:0000211;2.61e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.78e-27,32;CL:0000192,7.79e-20,43;CL:0000514,7.79e-20,43;CL:0000187,4.20e-15,55;CL:0002595,1.27e-14,5;CL:0000680,3.17e-14,58;CL:0000056,3.17e-14,58;CL:0000355,3.17e-14,58;CL:0000393,1.96e-13,61;CL:0000211,1.96e-13,61;CL:0002539,1.01e-12,10;CL:0002582,4.42e-11,3;CL:0002594,1.52e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;2.15e-14;43!CL:0000355;7.06e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.41e-11;3!DOID:127;3.41e-11;3!DOID:0060072;1.30e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.79e-11,3;DOID:127,3.79e-11,3;DOID:0060072,1.40e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000025!1.98e-14!194;UBERON:0001637!5.39e-14!42;UBERON:0003509!5.39e-14!42;UBERON:0004572!5.39e-14!42;UBERON:0004872!3.08e-12!84;UBERON:0004111!4.65e-12!241;UBERON:0004573!6.98e-11!33;UBERON:0004571!6.98e-11!33;UBERON:0000483!8.07e-11!309;UBERON:0001981!1.04e-10!60;UBERON:0007500!1.04e-10!60;UBERON:0004537!1.04e-10!60;UBERON:0006965!1.04e-10!60;UBERON:0000119!1.59e-10!312;UBERON:0000477!2.28e-10!286;UBERON:0003914!6.12e-10!118;UBERON:0002385!1.13e-09!63;UBERON:0001015!1.13e-09!63;UBERON:0000383!1.13e-09!63;UBERON:0001134!2.64e-09!61;UBERON:0002036!2.64e-09!61;UBERON:0003082!2.64e-09!61;UBERON:0001009!7.90e-09!113;UBERON:0007023!9.11e-09!115;UBERON:0000055!2.19e-08!69;UBERON:0001049!2.86e-08!57;UBERON:0005068!2.86e-08!57;UBERON:0006241!2.86e-08!57;UBERON:0007135!2.86e-08!57;UBERON:0004290!5.89e-08!70;UBERON:0004535!6.55e-08!110;UBERON:0002049!6.73e-08!79;UBERON:0007798!6.73e-08!79;UBERON:0007100!1.58e-07!27;UBERON:0001310!2.14e-07!4;UBERON:0000486!3.52e-07!82;UBERON:0001893!3.69e-07!34;UBERON:0002616!4.94e-07!59;UBERON:0003080!6.58e-07!42 | |ontology_enrichment_uberon=UBERON:0000025!1.98e-14!194;UBERON:0001637!5.39e-14!42;UBERON:0003509!5.39e-14!42;UBERON:0004572!5.39e-14!42;UBERON:0004872!3.08e-12!84;UBERON:0004111!4.65e-12!241;UBERON:0004573!6.98e-11!33;UBERON:0004571!6.98e-11!33;UBERON:0000483!8.07e-11!309;UBERON:0001981!1.04e-10!60;UBERON:0007500!1.04e-10!60;UBERON:0004537!1.04e-10!60;UBERON:0006965!1.04e-10!60;UBERON:0000119!1.59e-10!312;UBERON:0000477!2.28e-10!286;UBERON:0003914!6.12e-10!118;UBERON:0002385!1.13e-09!63;UBERON:0001015!1.13e-09!63;UBERON:0000383!1.13e-09!63;UBERON:0001134!2.64e-09!61;UBERON:0002036!2.64e-09!61;UBERON:0003082!2.64e-09!61;UBERON:0001009!7.90e-09!113;UBERON:0007023!9.11e-09!115;UBERON:0000055!2.19e-08!69;UBERON:0001049!2.86e-08!57;UBERON:0005068!2.86e-08!57;UBERON:0006241!2.86e-08!57;UBERON:0007135!2.86e-08!57;UBERON:0004290!5.89e-08!70;UBERON:0004535!6.55e-08!110;UBERON:0002049!6.73e-08!79;UBERON:0007798!6.73e-08!79;UBERON:0007100!1.58e-07!27;UBERON:0001310!2.14e-07!4;UBERON:0000486!3.52e-07!82;UBERON:0001893!3.69e-07!34;UBERON:0002616!4.94e-07!59;UBERON:0003080!6.58e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.07e-15;33!UBERON:0004571;1.07e-15;33!UBERON:0003834;1.10e-14;5!UBERON:0001533;1.10e-14;5!UBERON:0004237;1.19e-12;10!UBERON:0004695;1.19e-12;10!UBERON:0002111;1.19e-12;10!UBERON:0004178;1.19e-12;10!UBERON:0001637;9.70e-12;42!UBERON:0003509;9.70e-12;42!UBERON:0004572;9.70e-12;42!UBERON:0003513;1.21e-10;7!UBERON:0002134;5.09e-09;1!UBERON:0005208;5.09e-09;1!UBERON:0004145;5.09e-09;1!UBERON:0005946;5.09e-09;1!UBERON:0005965;5.09e-09;1!UBERON:0002078;5.09e-09;1!UBERON:0001310;1.30e-08;4!UBERON:0001135;1.75e-08;15!UBERON:0000055;2.34e-07;65!UBERON:0003914;2.51e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.37e-20,42;UBERON:0003509,2.37e-20,42;UBERON:0004572,2.37e-20,42;UBERON:0004573,1.11e-17,33;UBERON:0004571,1.11e-17,33;UBERON:0007500,1.06e-16,59;UBERON:0001981,1.06e-16,59;UBERON:0004537,1.06e-16,59;UBERON:0006965,1.06e-16,59;UBERON:0004872,1.28e-15,83;UBERON:0003834,1.27e-14,5;UBERON:0001533,1.27e-14,5;UBERON:0000055,3.28e-14,68;UBERON:0001134,3.46e-13,62;UBERON:0002036,3.46e-13,62;UBERON:0003082,3.46e-13,62;UBERON:0004237,1.01e-12,10;UBERON:0004695,1.01e-12,10;UBERON:0002111,1.01e-12,10;UBERON:0004178,1.01e-12,10;UBERON:0002385,1.02e-12,64;UBERON:0001015,1.02e-12,64;UBERON:0000383,1.02e-12,64;UBERON:0002049,4.05e-12,78;UBERON:0007798,4.05e-12,78;UBERON:0003914,4.98e-12,117;UBERON:0004535,2.76e-11,109;UBERON:0002329,2.80e-11,71;UBERON:0003059,2.80e-11,71;UBERON:0007282,2.80e-11,71;UBERON:0004290,2.80e-11,71;UBERON:0009618,2.80e-11,71;UBERON:0003077,4.26e-11,72;UBERON:0007285,4.26e-11,72;UBERON:0007524,6.41e-11,73;UBERON:0001009,6.47e-11,112;UBERON:0003513,1.34e-10,7;UBERON:0007503,4.23e-10,78;UBERON:0000486,2.22e-09,83;UBERON:0002134,4.91e-09,1;UBERON:0005208,4.91e-09,1;UBERON:0005946,4.91e-09,1;UBERON:0005965,4.91e-09,1;UBERON:0002078,4.91e-09,1;UBERON:0001310,1.52e-08,4;UBERON:0001135,1.57e-08,15;UBERON:0000025,3.07e-07,192 | |||
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|short_description=p6@C5orf62 | |short_description=p6@C5orf62 | ||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p6@C5orf62 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C5orf62_5end |
Coexpression cluster: | C2814_Smooth_mesenchymal_alveolar_Preadipocyte_pancreas_leiomyoma_Mast |
Association with transcript: | -7bp_to_uc003lsw.2_5end |
EntrezGene: | C5orf62 |
HGNC: | 30248 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.78e-27 | 32 |
smooth muscle cell | 7.79e-20 | 43 |
smooth muscle myoblast | 7.79e-20 | 43 |
muscle cell | 4.20e-15 | 55 |
smooth muscle cell of the subclavian artery | 1.27e-14 | 5 |
muscle precursor cell | 3.17e-14 | 58 |
myoblast | 3.17e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.17e-14 | 58 |
electrically responsive cell | 1.96e-13 | 61 |
electrically active cell | 1.96e-13 | 61 |
aortic smooth muscle cell | 1.01e-12 | 10 |
visceral preadipocyte | 4.42e-11 | 3 |
smooth muscle cell of the umbilical artery | 1.52e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.79e-11 | 3 |
leiomyoma | 3.79e-11 | 3 |
benign neoplasm | 1.40e-08 | 4 |