FFCP PHASE1:Hg19::chr5:135385158..135385200,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000514554_5end | |association_with_transcript=-4bp_to_ENST00000514554_5end | ||
|cluster_id=chr5:135385158..135385200,+ | |||
|coexpression_cluster_id=C295 | |coexpression_cluster_id=C295 | ||
|description=CAGE_peak_7_at_TGFBI_5end | |description=CAGE_peak_7_at_TGFBI_5end | ||
|id=chr5:135385158..135385200,+ | |id=chr5:135385158..135385200,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.17e-26!180;CL:0002371!3.47e-20!591;CL:0000144!1.43e-18!625;CL:0000680!2.57e-18!57;CL:0000056!2.57e-18!57;CL:0000355!2.57e-18!57;CL:0000187!1.35e-16!54;CL:0000048!3.15e-16!430;CL:0000548!1.04e-15!679;CL:0000004!1.04e-15!679;CL:0000255!1.04e-15!679;CL:0000723!1.29e-15!436;CL:0000183!1.78e-15!59;CL:0000012!5.42e-15!682;CL:0000034!3.96e-14!444;CL:0000057!6.03e-14!75;CL:0000393!1.28e-13!60;CL:0000211!1.28e-13!60;CL:0000192!1.80e-13!42;CL:0000514!1.80e-13!42;CL:0000359!2.73e-11!32;CL:0002194!4.58e-09!63;CL:0000576!4.58e-09!63;CL:0000040!4.58e-09!63;CL:0000559!4.58e-09!63;CL:0002009!5.49e-09!65;CL:0000222!7.82e-09!119;CL:0000003!9.85e-09!722;CL:0002334!6.43e-08!12;CL:0002057!1.76e-07!42;CL:0000860!7.29e-07!45;CL:0002320!8.37e-07!365 | |ontology_enrichment_celltype=CL:0000055!3.17e-26!180;CL:0002371!3.47e-20!591;CL:0000144!1.43e-18!625;CL:0000680!2.57e-18!57;CL:0000056!2.57e-18!57;CL:0000355!2.57e-18!57;CL:0000187!1.35e-16!54;CL:0000048!3.15e-16!430;CL:0000548!1.04e-15!679;CL:0000004!1.04e-15!679;CL:0000255!1.04e-15!679;CL:0000723!1.29e-15!436;CL:0000183!1.78e-15!59;CL:0000012!5.42e-15!682;CL:0000034!3.96e-14!444;CL:0000057!6.03e-14!75;CL:0000393!1.28e-13!60;CL:0000211!1.28e-13!60;CL:0000192!1.80e-13!42;CL:0000514!1.80e-13!42;CL:0000359!2.73e-11!32;CL:0002194!4.58e-09!63;CL:0000576!4.58e-09!63;CL:0000040!4.58e-09!63;CL:0000559!4.58e-09!63;CL:0002009!5.49e-09!65;CL:0000222!7.82e-09!119;CL:0000003!9.85e-09!722;CL:0002334!6.43e-08!12;CL:0002057!1.76e-07!42;CL:0000860!7.29e-07!45;CL:0002320!8.37e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.92e-11;32!CL:0000187;7.00e-10;55!CL:0002334;7.73e-10;12!CL:0000192;2.85e-09;43!CL:0000393;2.09e-07;61!CL:0000211;2.09e-07;61!CL:0002620;9.57e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,5.52e-23,427;CL:0000723,3.14e-22,433;CL:0000034,1.10e-20,441;CL:0000680,6.20e-19,58;CL:0000056,6.20e-19,58;CL:0000355,6.20e-19,58;CL:0000187,7.58e-17,55;CL:0000057,3.33e-16,76;CL:0000393,1.26e-13,61;CL:0000211,1.26e-13,61;CL:0000192,7.89e-13,43;CL:0000514,7.89e-13,43;CL:0000359,2.61e-11,32;CL:0002320,5.12e-11,361;CL:0000134,1.85e-10,354;CL:0002334,7.63e-10,12;CL:0000219,1.12e-08,386;CL:0000222,2.53e-07,121;CL:0002620,8.84e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000355;2.52e-10;58!CL:0000514;2.85e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.97e-20!167;UBERON:0001134!1.74e-17!61;UBERON:0002036!1.74e-17!61;UBERON:0003082!1.74e-17!61;UBERON:0000486!3.12e-17!82;UBERON:0002385!1.68e-16!63;UBERON:0001015!1.68e-16!63;UBERON:0000383!1.68e-16!63;UBERON:0004290!1.18e-15!70;UBERON:0000914!9.10e-15!83;UBERON:0002329!9.10e-15!83;UBERON:0003077!9.10e-15!83;UBERON:0003059!9.10e-15!83;UBERON:0007282!9.10e-15!83;UBERON:0009618!9.10e-15!83;UBERON:0007285!9.10e-15!83;UBERON:0000926!1.53e-13!448;UBERON:0004120!1.53e-13!448;UBERON:0006603!1.53e-13!448;UBERON:0000468!1.41e-11!659;UBERON:0005256!2.02e-11!143;UBERON:0003081!9.05e-11!216;UBERON:0000490!3.36e-10!138;UBERON:0001637!7.80e-10!42;UBERON:0003509!7.80e-10!42;UBERON:0004572!7.80e-10!42;UBERON:0000467!9.69e-10!625;UBERON:0000480!1.49e-09!626;UBERON:0004573!3.83e-09!33;UBERON:0004571!3.83e-09!33;UBERON:0002100!1.19e-08!216;UBERON:0004872!1.06e-07!84;UBERON:0002384!4.27e-07!375;UBERON:0002050!4.32e-07!605;UBERON:0005423!4.32e-07!605;UBERON:0000923!4.75e-07!604;UBERON:0005291!4.75e-07!604;UBERON:0006598!4.75e-07!604;UBERON:0002532!4.75e-07!604;UBERON:0000922!9.37e-07!612 | |ontology_enrichment_uberon=UBERON:0002204!2.97e-20!167;UBERON:0001134!1.74e-17!61;UBERON:0002036!1.74e-17!61;UBERON:0003082!1.74e-17!61;UBERON:0000486!3.12e-17!82;UBERON:0002385!1.68e-16!63;UBERON:0001015!1.68e-16!63;UBERON:0000383!1.68e-16!63;UBERON:0004290!1.18e-15!70;UBERON:0000914!9.10e-15!83;UBERON:0002329!9.10e-15!83;UBERON:0003077!9.10e-15!83;UBERON:0003059!9.10e-15!83;UBERON:0007282!9.10e-15!83;UBERON:0009618!9.10e-15!83;UBERON:0007285!9.10e-15!83;UBERON:0000926!1.53e-13!448;UBERON:0004120!1.53e-13!448;UBERON:0006603!1.53e-13!448;UBERON:0000468!1.41e-11!659;UBERON:0005256!2.02e-11!143;UBERON:0003081!9.05e-11!216;UBERON:0000490!3.36e-10!138;UBERON:0001637!7.80e-10!42;UBERON:0003509!7.80e-10!42;UBERON:0004572!7.80e-10!42;UBERON:0000467!9.69e-10!625;UBERON:0000480!1.49e-09!626;UBERON:0004573!3.83e-09!33;UBERON:0004571!3.83e-09!33;UBERON:0002100!1.19e-08!216;UBERON:0004872!1.06e-07!84;UBERON:0002384!4.27e-07!375;UBERON:0002050!4.32e-07!605;UBERON:0005423!4.32e-07!605;UBERON:0000923!4.75e-07!604;UBERON:0005291!4.75e-07!604;UBERON:0006598!4.75e-07!604;UBERON:0002532!4.75e-07!604;UBERON:0000922!9.37e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.19e-09;33!UBERON:0004571;2.19e-09;33!UBERON:0002385;6.10e-09;31!UBERON:0001015;6.10e-09;31!UBERON:0000383;6.10e-09;31!UBERON:0001637;3.72e-08;42!UBERON:0003509;3.72e-08;42!UBERON:0004572;3.72e-08;42 | |||
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| ||
|short_description=p7@TGFBI | |short_description=p7@TGFBI | ||
}} | }} |
Latest revision as of 19:34, 24 September 2015
Short description: | p7@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | -4bp_to_ENST00000514554_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 5.52e-23 | 427 |
somatic stem cell | 3.14e-22 | 433 |
stem cell | 1.10e-20 | 441 |
muscle precursor cell | 6.20e-19 | 58 |
myoblast | 6.20e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.20e-19 | 58 |
muscle cell | 7.58e-17 | 55 |
fibroblast | 3.33e-16 | 76 |
electrically responsive cell | 1.26e-13 | 61 |
electrically active cell | 1.26e-13 | 61 |
smooth muscle cell | 7.89e-13 | 43 |
smooth muscle myoblast | 7.89e-13 | 43 |
vascular associated smooth muscle cell | 2.61e-11 | 32 |
connective tissue cell | 5.12e-11 | 361 |
mesenchymal cell | 1.85e-10 | 354 |
preadipocyte | 7.63e-10 | 12 |
motile cell | 1.12e-08 | 386 |
mesodermal cell | 2.53e-07 | 121 |
skin fibroblast | 8.84e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.25e-18 | 167 |
skeletal muscle tissue | 1.58e-17 | 62 |
striated muscle tissue | 1.58e-17 | 62 |
myotome | 1.58e-17 | 62 |
muscle tissue | 2.00e-16 | 64 |
musculature | 2.00e-16 | 64 |
musculature of body | 2.00e-16 | 64 |
multilaminar epithelium | 4.34e-16 | 83 |
somite | 1.13e-14 | 71 |
presomitic mesoderm | 1.13e-14 | 71 |
presumptive segmental plate | 1.13e-14 | 71 |
dermomyotome | 1.13e-14 | 71 |
trunk paraxial mesoderm | 1.13e-14 | 71 |
dense mesenchyme tissue | 1.86e-14 | 73 |
paraxial mesoderm | 3.15e-14 | 72 |
presumptive paraxial mesoderm | 3.15e-14 | 72 |
mesoderm | 6.00e-14 | 315 |
mesoderm-derived structure | 6.00e-14 | 315 |
presumptive mesoderm | 6.00e-14 | 315 |
epithelial vesicle | 1.85e-12 | 78 |
artery | 1.16e-11 | 42 |
arterial blood vessel | 1.16e-11 | 42 |
arterial system | 1.16e-11 | 42 |
connective tissue | 2.57e-11 | 371 |
systemic artery | 1.11e-10 | 33 |
systemic arterial system | 1.11e-10 | 33 |
trunk mesenchyme | 8.31e-10 | 122 |
unilaminar epithelium | 1.74e-08 | 148 |
splanchnic layer of lateral plate mesoderm | 4.64e-08 | 83 |
lateral plate mesoderm | 5.46e-08 | 203 |
mesenchyme | 6.78e-08 | 160 |
entire embryonic mesenchyme | 6.78e-08 | 160 |
tissue | 4.37e-07 | 773 |