FFCP PHASE1:Hg19::chr5:135382984..135383005,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000508767_5end | |association_with_transcript=-7bp_to_ENST00000508767_5end | ||
|cluster_id=chr5:135382984..135383005,+ | |||
|coexpression_cluster_id=C295 | |coexpression_cluster_id=C295 | ||
|description=CAGE_peak_14_at_TGFBI_5end | |description=CAGE_peak_14_at_TGFBI_5end | ||
|id=chr5:135382984..135383005,+ | |id=chr5:135382984..135383005,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.68e-27!180;CL:0000680!6.26e-18!57;CL:0000056!6.26e-18!57;CL:0000355!6.26e-18!57;CL:0000187!3.85e-16!54;CL:0000183!1.66e-15!59;CL:0000192!2.03e-14!42;CL:0000514!2.03e-14!42;CL:0000048!2.84e-14!430;CL:0002371!4.98e-14!591;CL:0000723!5.99e-14!436;CL:0000057!6.43e-14!75;CL:0000393!1.39e-13!60;CL:0000211!1.39e-13!60;CL:0000144!2.49e-13!625;CL:0000034!6.74e-13!444;CL:0000359!1.05e-12!32;CL:0000548!7.51e-12!679;CL:0000004!7.51e-12!679;CL:0000255!7.51e-12!679;CL:0000012!2.57e-11!682;CL:0002334!3.06e-08!12;CL:0002620!4.98e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.68e-27!180;CL:0000680!6.26e-18!57;CL:0000056!6.26e-18!57;CL:0000355!6.26e-18!57;CL:0000187!3.85e-16!54;CL:0000183!1.66e-15!59;CL:0000192!2.03e-14!42;CL:0000514!2.03e-14!42;CL:0000048!2.84e-14!430;CL:0002371!4.98e-14!591;CL:0000723!5.99e-14!436;CL:0000057!6.43e-14!75;CL:0000393!1.39e-13!60;CL:0000211!1.39e-13!60;CL:0000144!2.49e-13!625;CL:0000034!6.74e-13!444;CL:0000359!1.05e-12!32;CL:0000548!7.51e-12!679;CL:0000004!7.51e-12!679;CL:0000255!7.51e-12!679;CL:0000012!2.57e-11!682;CL:0002334!3.06e-08!12;CL:0002620!4.98e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.39e-12;12!CL:0000359;8.08e-10;32!CL:0000499;6.98e-08;28!CL:0000192;7.74e-08;43!CL:0000187;1.27e-07;55!CL:0002620;1.47e-07;23!CL:0000327;2.48e-07;15!CL:0000153;3.59e-07;9!CL:0000447;3.59e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.28e-16,76;CL:0000048,4.33e-15,427;CL:0000680,1.85e-14,58;CL:0000056,1.85e-14,58;CL:0000355,1.85e-14,58;CL:0000723,2.39e-14,433;CL:0000034,2.12e-13,441;CL:0000187,3.09e-12,55;CL:0002334,4.06e-12,12;CL:0000192,1.77e-10,43;CL:0000514,1.77e-10,43;CL:0000359,1.79e-10,32;CL:0000393,4.56e-10,61;CL:0000211,4.56e-10,61;CL:0000499,6.54e-08,28;CL:0002620,1.87e-07,23;CL:0000327,2.01e-07,15;CL:0000153,3.47e-07,9;CL:0000447,3.47e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;7.28e-08;58!CL:0000514;7.74e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.01e-17!61;UBERON:0002036!1.01e-17!61;UBERON:0003082!1.01e-17!61;UBERON:0002385!1.70e-17!63;UBERON:0001015!1.70e-17!63;UBERON:0000383!1.70e-17!63;UBERON:0002204!1.52e-15!167;UBERON:0004290!2.26e-15!70;UBERON:0000486!2.38e-15!82;UBERON:0000914!3.48e-14!83;UBERON:0002329!3.48e-14!83;UBERON:0003077!3.48e-14!83;UBERON:0003059!3.48e-14!83;UBERON:0007282!3.48e-14!83;UBERON:0009618!3.48e-14!83;UBERON:0007285!3.48e-14!83;UBERON:0005256!1.64e-12!143;UBERON:0000490!1.79e-10!138;UBERON:0001637!9.79e-10!42;UBERON:0003509!9.79e-10!42;UBERON:0004572!9.79e-10!42;UBERON:0002100!1.06e-09!216;UBERON:0004573!1.25e-09!33;UBERON:0004571!1.25e-09!33;UBERON:0000926!8.38e-09!448;UBERON:0004120!8.38e-09!448;UBERON:0006603!8.38e-09!448;UBERON:0000468!6.87e-07!659 | |ontology_enrichment_uberon=UBERON:0001134!1.01e-17!61;UBERON:0002036!1.01e-17!61;UBERON:0003082!1.01e-17!61;UBERON:0002385!1.70e-17!63;UBERON:0001015!1.70e-17!63;UBERON:0000383!1.70e-17!63;UBERON:0002204!1.52e-15!167;UBERON:0004290!2.26e-15!70;UBERON:0000486!2.38e-15!82;UBERON:0000914!3.48e-14!83;UBERON:0002329!3.48e-14!83;UBERON:0003077!3.48e-14!83;UBERON:0003059!3.48e-14!83;UBERON:0007282!3.48e-14!83;UBERON:0009618!3.48e-14!83;UBERON:0007285!3.48e-14!83;UBERON:0005256!1.64e-12!143;UBERON:0000490!1.79e-10!138;UBERON:0001637!9.79e-10!42;UBERON:0003509!9.79e-10!42;UBERON:0004572!9.79e-10!42;UBERON:0002100!1.06e-09!216;UBERON:0004573!1.25e-09!33;UBERON:0004571!1.25e-09!33;UBERON:0000926!8.38e-09!448;UBERON:0004120!8.38e-09!448;UBERON:0006603!8.38e-09!448;UBERON:0000468!6.87e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.89e-08;9!UBERON:0000042;1.89e-08;9!UBERON:0004573;2.78e-08;33!UBERON:0004571;2.78e-08;33!UBERON:0002385;6.72e-08;31!UBERON:0001015;6.72e-08;31!UBERON:0000383;6.72e-08;31!UBERON:0003688;1.80e-07;6!UBERON:0002358;1.80e-07;6!UBERON:0003684;1.80e-07;6!UBERON:0001178;1.80e-07;6!UBERON:0001637;5.62e-07;42!UBERON:0003509;5.62e-07;42!UBERON:0004572;5.62e-07;42 | |||
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| ||
|short_description=p14@TGFBI | |short_description=p14@TGFBI | ||
}} | }} |
Latest revision as of 19:26, 24 September 2015
Short description: | p14@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | -7bp_to_ENST00000508767_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.28e-16 | 76 |
multi fate stem cell | 4.33e-15 | 427 |
muscle precursor cell | 1.85e-14 | 58 |
myoblast | 1.85e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-14 | 58 |
somatic stem cell | 2.39e-14 | 433 |
stem cell | 2.12e-13 | 441 |
muscle cell | 3.09e-12 | 55 |
preadipocyte | 4.06e-12 | 12 |
smooth muscle cell | 1.77e-10 | 43 |
smooth muscle myoblast | 1.77e-10 | 43 |
vascular associated smooth muscle cell | 1.79e-10 | 32 |
electrically responsive cell | 4.56e-10 | 61 |
electrically active cell | 4.56e-10 | 61 |
stromal cell | 6.54e-08 | 28 |
skin fibroblast | 1.87e-07 | 23 |
extracellular matrix secreting cell | 2.01e-07 | 15 |
GAG secreting cell | 3.47e-07 | 9 |
carbohydrate secreting cell | 3.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.05e-14 | 62 |
striated muscle tissue | 9.05e-14 | 62 |
myotome | 9.05e-14 | 62 |
muscle tissue | 5.58e-13 | 64 |
musculature | 5.58e-13 | 64 |
musculature of body | 5.58e-13 | 64 |
multilaminar epithelium | 3.42e-11 | 83 |
somite | 1.32e-10 | 71 |
presomitic mesoderm | 1.32e-10 | 71 |
presumptive segmental plate | 1.32e-10 | 71 |
dermomyotome | 1.32e-10 | 71 |
trunk paraxial mesoderm | 1.32e-10 | 71 |
paraxial mesoderm | 2.61e-10 | 72 |
presumptive paraxial mesoderm | 2.61e-10 | 72 |
dense mesenchyme tissue | 5.05e-10 | 73 |
artery | 2.50e-09 | 42 |
arterial blood vessel | 2.50e-09 | 42 |
arterial system | 2.50e-09 | 42 |
musculoskeletal system | 3.45e-09 | 167 |
systemic artery | 3.47e-09 | 33 |
systemic arterial system | 3.47e-09 | 33 |
trunk mesenchyme | 5.20e-09 | 122 |
epithelial vesicle | 1.02e-08 | 78 |
trunk | 2.32e-07 | 199 |
omentum | 2.58e-07 | 6 |
peritoneum | 2.58e-07 | 6 |
abdominal cavity | 2.58e-07 | 6 |
visceral peritoneum | 2.58e-07 | 6 |
unilaminar epithelium | 4.79e-07 | 148 |
mesenchyme | 6.47e-07 | 160 |
entire embryonic mesenchyme | 6.47e-07 | 160 |
connective tissue | 6.98e-07 | 371 |