FFCP PHASE1:Hg19::chr5:135382532..135382588,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-424bp_to_ENST00000508767_5end | |association_with_transcript=-424bp_to_ENST00000508767_5end | ||
|cluster_id=chr5:135382532..135382588,+ | |||
|coexpression_cluster_id=C295 | |coexpression_cluster_id=C295 | ||
|description=CAGE_peak_6_at_TGFBI_5end | |description=CAGE_peak_6_at_TGFBI_5end | ||
|id=chr5:135382532..135382588,+ | |id=chr5:135382532..135382588,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.92e-26!180;CL:0002371!3.24e-20!591;CL:0000144!5.97e-19!625;CL:0000548!1.06e-16!679;CL:0000004!1.06e-16!679;CL:0000255!1.06e-16!679;CL:0000680!2.68e-16!57;CL:0000056!2.68e-16!57;CL:0000355!2.68e-16!57;CL:0000012!3.01e-16!682;CL:0000187!1.28e-14!54;CL:0000183!2.82e-14!59;CL:0000057!2.90e-14!75;CL:0000048!8.15e-14!430;CL:0000723!1.63e-13!436;CL:0000034!2.96e-12!444;CL:0000192!3.58e-12!42;CL:0000514!3.58e-12!42;CL:0000393!9.01e-12!60;CL:0000211!9.01e-12!60;CL:0000359!1.59e-11!32;CL:0002009!2.80e-09!65;CL:0002194!4.44e-09!63;CL:0000576!4.44e-09!63;CL:0000040!4.44e-09!63;CL:0000559!4.44e-09!63;CL:0000003!1.52e-08!722;CL:0002057!8.04e-08!42;CL:0000222!1.10e-07!119;CL:0002334!3.06e-07!12;CL:0000557!8.42e-07!71 | |ontology_enrichment_celltype=CL:0000055!8.92e-26!180;CL:0002371!3.24e-20!591;CL:0000144!5.97e-19!625;CL:0000548!1.06e-16!679;CL:0000004!1.06e-16!679;CL:0000255!1.06e-16!679;CL:0000680!2.68e-16!57;CL:0000056!2.68e-16!57;CL:0000355!2.68e-16!57;CL:0000012!3.01e-16!682;CL:0000187!1.28e-14!54;CL:0000183!2.82e-14!59;CL:0000057!2.90e-14!75;CL:0000048!8.15e-14!430;CL:0000723!1.63e-13!436;CL:0000034!2.96e-12!444;CL:0000192!3.58e-12!42;CL:0000514!3.58e-12!42;CL:0000393!9.01e-12!60;CL:0000211!9.01e-12!60;CL:0000359!1.59e-11!32;CL:0002009!2.80e-09!65;CL:0002194!4.44e-09!63;CL:0000576!4.44e-09!63;CL:0000040!4.44e-09!63;CL:0000559!4.44e-09!63;CL:0000003!1.52e-08!722;CL:0002057!8.04e-08!42;CL:0000222!1.10e-07!119;CL:0002334!3.06e-07!12;CL:0000557!8.42e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.03e-11;32!CL:0000473;2.57e-09;39!CL:0000234;2.57e-09;39!CL:0000192;3.27e-09;43!CL:0000860;4.18e-09;33!CL:0002057;4.18e-09;33!CL:0000187;5.93e-09;55!CL:0002334;1.73e-08;12!CL:0002620;7.16e-07;23!CL:0000393;8.30e-07;61!CL:0000211;8.30e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.27e-21,427;CL:0000723,7.84e-21,433;CL:0000034,3.65e-19,441;CL:0000680,1.86e-17,58;CL:0000056,1.86e-17,58;CL:0000355,1.86e-17,58;CL:0000187,1.68e-15,55;CL:0000057,7.21e-14,76;CL:0000192,2.61e-12,43;CL:0000514,2.61e-12,43;CL:0000393,2.79e-12,61;CL:0000211,2.79e-12,61;CL:0000359,3.36e-12,32;CL:0002320,4.40e-11,361;CL:0000134,3.66e-10,354;CL:0000473,2.21e-09,48;CL:0000234,2.21e-09,48;CL:0002009,7.94e-09,61;CL:0000219,1.02e-08,386;CL:0002194,1.38e-08,59;CL:0000576,1.38e-08,59;CL:0000040,1.38e-08,59;CL:0000559,1.38e-08,59;CL:0002334,1.96e-08,12;CL:0000860,1.12e-07,42;CL:0002057,1.12e-07,42;CL:0000557,6.84e-07,67;CL:0002620,9.64e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000355;3.09e-09;58!CL:0000514;3.27e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.31e-18!167;UBERON:0000486!5.41e-15!82;UBERON:0001134!1.51e-14!61;UBERON:0002036!1.51e-14!61;UBERON:0003082!1.51e-14!61;UBERON:0000914!7.94e-14!83;UBERON:0002329!7.94e-14!83;UBERON:0003077!7.94e-14!83;UBERON:0003059!7.94e-14!83;UBERON:0007282!7.94e-14!83;UBERON:0009618!7.94e-14!83;UBERON:0007285!7.94e-14!83;UBERON:0004290!1.91e-13!70;UBERON:0002385!3.09e-13!63;UBERON:0001015!3.09e-13!63;UBERON:0000383!3.09e-13!63;UBERON:0000926!7.10e-12!448;UBERON:0004120!7.10e-12!448;UBERON:0006603!7.10e-12!448;UBERON:0000468!4.35e-11!659;UBERON:0005256!3.58e-10!143;UBERON:0001637!1.04e-09!42;UBERON:0003509!1.04e-09!42;UBERON:0004572!1.04e-09!42;UBERON:0003081!1.44e-09!216;UBERON:0000467!4.46e-09!625;UBERON:0000480!6.93e-09!626;UBERON:0004573!1.46e-08!33;UBERON:0004571!1.46e-08!33;UBERON:0002100!5.40e-08!216;UBERON:0000490!9.57e-08!138 | |ontology_enrichment_uberon=UBERON:0002204!3.31e-18!167;UBERON:0000486!5.41e-15!82;UBERON:0001134!1.51e-14!61;UBERON:0002036!1.51e-14!61;UBERON:0003082!1.51e-14!61;UBERON:0000914!7.94e-14!83;UBERON:0002329!7.94e-14!83;UBERON:0003077!7.94e-14!83;UBERON:0003059!7.94e-14!83;UBERON:0007282!7.94e-14!83;UBERON:0009618!7.94e-14!83;UBERON:0007285!7.94e-14!83;UBERON:0004290!1.91e-13!70;UBERON:0002385!3.09e-13!63;UBERON:0001015!3.09e-13!63;UBERON:0000383!3.09e-13!63;UBERON:0000926!7.10e-12!448;UBERON:0004120!7.10e-12!448;UBERON:0006603!7.10e-12!448;UBERON:0000468!4.35e-11!659;UBERON:0005256!3.58e-10!143;UBERON:0001637!1.04e-09!42;UBERON:0003509!1.04e-09!42;UBERON:0004572!1.04e-09!42;UBERON:0003081!1.44e-09!216;UBERON:0000467!4.46e-09!625;UBERON:0000480!6.93e-09!626;UBERON:0004573!1.46e-08!33;UBERON:0004571!1.46e-08!33;UBERON:0002100!5.40e-08!216;UBERON:0000490!9.57e-08!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.65e-09;33!UBERON:0004571;9.65e-09;33!UBERON:0002385;4.74e-08;31!UBERON:0001015;4.74e-08;31!UBERON:0000383;4.74e-08;31!UBERON:0001637;4.18e-07;42!UBERON:0003509;4.18e-07;42!UBERON:0004572;4.18e-07;42 | |||
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|phase1_expression=10.3556676184217,27.8330681058278,9.58489947852604,11.0080628188443,13.8557939272459,12.2127393374052,0,0.631719873426831,0.522371256399677,2.45733936501509,3.48900583986214,5.89791704751465,7.91300934685361,1.23766352960047,3.31397375727916,18.8251041006497,18.0808358407193,18.9880623500717,16.1017823600867,8.125989833068,9.58803248847989,10.3440058087769,0,4.37998160233229,1.63205431473244,0.0764134057479513,0,0,1.18009283054671,0,0.309632246632152,0,5.72291245678675,2.21852406100073,0,0,0,0,2.00544447470142,1.08505435357926,0.671746422719773,0.32389366601898,1.03030227053675,6.39752250630085,9.06902264853143,8.24785808038575,4.41615170120801,5.34518254428373,3.09706370895104,5.17846306179871,6.40401766322752,3.78371567821736,1.37898272294647,4.51839278508678,1.35426486594342,7.52969358170419,9.5517152520246,4.94391665779186,6.42776173978895,1.92557416245656,1.91801137739712,6.26717470354761,7.38015533200038,10.2293940127847,1.45104619314292,1.13477044938228,2.4912889959823,5.27622197039161,4.69334626578181,3.47502151528187,0.605399502633369,1.47311054395026,1.89877432464531,1.26753171787165,0.425208599930087,0.628975936525128,1.12328631146495,1.20141514273205,3.2145117339416,0.570025487482497,1.39241674039363,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,10.0605128955545,1.2786256184353,11.9274920286907,7.52006865953834,25.492987337105,20.6774346233286,53.5298357332899,4.34860158954712,15.5210578223795,9.48615685485761,0.130979075497713,0.728590576585084,2.22470665670658,3.24547393654683,4.70150290708022,12.8969221703299,1.43094374583205,0.571994910780128,2.22874500797739,0,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0,0,0,0.24406205754817,0,4.86085168729056,0.17859945656816,0,0.112611480483322,0,0,0.366403487860815,0,0,1.3082821564276,32.800148811891,6.83804762988731,1.45650098894541,18.3575437279241,5.67469411517371,4.48542080113846,7.47242970107935,19.2400687765385,0.933633106199299,1.21239604862719,0.980771418680752,1.36221684880438,4.03323147135999,0.234321431833797,1.87296046098192,0,1.04614076386261,1.05691048779388,0.485618833104395,0.98315564691574,0.204154171254893,0.491337269247072,0.619954687054593,1.18800285728205,2.71993622206413,7.28129089550421,7.90479955997862,0.336672227908132,0.375355559615893,0.554128230968366,0.438977620880838,3.98434134538726,7.66214100423644,1.24775401476023,28.7023417102179,8.32873816392413,7.2056846394251,33.0100205692843,9.17167510222106,27.0522567047911,8.00302482225836,30.3797398034279,22.6053851973981,29.7871853608055,8.46859067509154,3.39456719319505,67.8068321706733,15.112814734146,2.20428770003634,2.51239109112286,2.18196896472668,0.286804595389004,0,0,0.116193942869518,0,0.252320850875628,0,0,1.28648187638577,2.76269842704961,0.464367928031979,0.721879481669586,0.354920400119532,0.842923450390509,1.44606617930089,0.772057809126758,0.435758888184812,0.949082476444386,0.808987848960987,0.588664395376038,0,0,0,3.2925920906512,10.2906097969879,0,0.982827216677626,0,0,0,4.11762744716461,1.75600456653801,1.1240175325762,0.402115889646523,0.277765335475589,0,2.07986957055916,2.88662684050547,0.695582429850461,1.52631302506568,0.144366447761074,0.925971025153221,0,0,0,1.72351904261178,1.8720341211139,5.20209068010549,0.93733833986777,11.0868204611247,0.992425680696705,0.358234090811393,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,1.71072446022705,0,0.600686115687835,0,0.336393253036082,6.5394010324992,0.51336800074665,3.49033632546,7.15312891703765,18.596660556232,0,2.08014873822732,1.02882949704857,0,0.532844358032199,7.14889968290738,2.71310802695722,6.58592269424615,5.86325131728723,4.26470338491055,13.4631818398683,0.602878754119172,0.871533458600294,1.59956785891291,7.29742683847143,6.52934218861764,4.21667878966063,3.83399768786532,8.04033550838797,1.42636905040718,11.5825045334063,19.5202506422864,20.7710717358279,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,4.2942022101699,8.00272833695483,0.542530047399471,14.3499894456257,9.27830741745241,0.315404830067869,2.22568688486155,2.70851489754947,4.5481500811197,6.2083842775503,3.32112799267718,8.66535092146005,0.868836144680828,1.76221041716467,2.05886054286514,0,2.15714200818617,0.640365346820666,0.909382714338778,0,15.7242952531434,17.1194387394956,15.0392733822301,41.2570338816618,28.0624736869985,6.14048698880044,27.0234587521261,7.42090332224955,6.9394362211195,8.34540108971697,2.13530605635904,9.8658341544888,6.2753604368378,0,8.42127175273796,0.552485933615378,4.13332013392584,3.27764102412091,7.73634048260602,0.902399225814824,0.616122696835318,0,1.46139224653261,1.79437769117889,2.27466768141793,0.170093705276516,1.0795795805107,0,0.270946437543853,1.50506932156456,0.254876273045038,0,1.79099803777743,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0.515205058238611,0,0,2.87132768998086,3.25030123018261,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| ||
|short_description=p6@TGFBI | |short_description=p6@TGFBI | ||
}} | }} |
Latest revision as of 19:21, 24 September 2015
Short description: | p6@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | -424bp_to_ENST00000508767_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.27e-21 | 427 |
somatic stem cell | 7.84e-21 | 433 |
stem cell | 3.65e-19 | 441 |
muscle precursor cell | 1.86e-17 | 58 |
myoblast | 1.86e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-17 | 58 |
muscle cell | 1.68e-15 | 55 |
fibroblast | 7.21e-14 | 76 |
smooth muscle cell | 2.61e-12 | 43 |
smooth muscle myoblast | 2.61e-12 | 43 |
electrically responsive cell | 2.79e-12 | 61 |
electrically active cell | 2.79e-12 | 61 |
vascular associated smooth muscle cell | 3.36e-12 | 32 |
connective tissue cell | 4.40e-11 | 361 |
mesenchymal cell | 3.66e-10 | 354 |
defensive cell | 2.21e-09 | 48 |
phagocyte | 2.21e-09 | 48 |
macrophage dendritic cell progenitor | 7.94e-09 | 61 |
motile cell | 1.02e-08 | 386 |
monopoietic cell | 1.38e-08 | 59 |
monocyte | 1.38e-08 | 59 |
monoblast | 1.38e-08 | 59 |
promonocyte | 1.38e-08 | 59 |
preadipocyte | 1.96e-08 | 12 |
classical monocyte | 1.12e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-07 | 42 |
granulocyte monocyte progenitor cell | 6.84e-07 | 67 |
skin fibroblast | 9.64e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.37e-19 | 167 |
skeletal muscle tissue | 1.16e-15 | 62 |
striated muscle tissue | 1.16e-15 | 62 |
myotome | 1.16e-15 | 62 |
multilaminar epithelium | 1.85e-15 | 83 |
muscle tissue | 1.40e-14 | 64 |
musculature | 1.40e-14 | 64 |
musculature of body | 1.40e-14 | 64 |
somite | 4.57e-14 | 71 |
presomitic mesoderm | 4.57e-14 | 71 |
presumptive segmental plate | 4.57e-14 | 71 |
dermomyotome | 4.57e-14 | 71 |
trunk paraxial mesoderm | 4.57e-14 | 71 |
dense mesenchyme tissue | 8.19e-14 | 73 |
mesoderm | 9.62e-14 | 315 |
mesoderm-derived structure | 9.62e-14 | 315 |
presumptive mesoderm | 9.62e-14 | 315 |
paraxial mesoderm | 1.33e-13 | 72 |
presumptive paraxial mesoderm | 1.33e-13 | 72 |
epithelial vesicle | 2.35e-13 | 78 |
connective tissue | 5.45e-11 | 371 |
artery | 3.86e-10 | 42 |
arterial blood vessel | 3.86e-10 | 42 |
arterial system | 3.86e-10 | 42 |
trunk mesenchyme | 4.75e-10 | 122 |
systemic artery | 8.85e-10 | 33 |
systemic arterial system | 8.85e-10 | 33 |
lateral plate mesoderm | 2.98e-09 | 203 |
mesenchyme | 7.81e-09 | 160 |
entire embryonic mesenchyme | 7.81e-09 | 160 |
unilaminar epithelium | 3.39e-07 | 148 |
trunk | 5.17e-07 | 199 |