FFCP PHASE1:Hg19::chr5:121414045..121414063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4015 | |EntrezGene=4015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6664 | |HGNC=6664 | ||
|TSSclassifier=strong | |||
|UniProt=D0PNI2,P28300 | |UniProt=D0PNI2,P28300 | ||
|association_with_transcript=0bp_to_NM_002317,uc003ksu.2_5end | |association_with_transcript=0bp_to_NM_002317,uc003ksu.2_5end | ||
|cluster_id=chr5:121414045..121414063,- | |||
|coexpression_cluster_id=C421 | |coexpression_cluster_id=C421 | ||
|description=CAGE_peak_2_at_LOX_5end | |description=CAGE_peak_2_at_LOX_5end | ||
|id=chr5:121414045..121414063,- | |id=chr5:121414045..121414063,- | ||
|ontology_enrichment_celltype=CL:0000055!4.10e-46!180;CL:0000057!3.75e-26!75;CL:0000222!1.81e-24!119;CL:0000220!2.15e-16!246;CL:0000680!5.21e-16!57;CL:0000056!5.21e-16!57;CL:0000355!5.21e-16!57;CL:0002321!5.50e-16!248;CL:0000187!2.52e-15!54;CL:0000183!2.96e-15!59;CL:0000192!2.29e-14!42;CL:0000514!2.29e-14!42;CL:0000393!4.84e-14!60;CL:0000211!4.84e-14!60;CL:0000359!2.50e-12!32;CL:0002620!6.14e-11!23;CL:0000144!4.19e-10!625;CL:0002371!1.41e-08!591;CL:0000213!1.73e-08!57;CL:0000215!1.73e-08!57;CL:0000548!5.87e-08!679;CL:0000004!5.87e-08!679;CL:0000255!5.87e-08!679;CL:0002334!9.04e-08!12;CL:0000012!1.59e-07!682 | |ontology_enrichment_celltype=CL:0000055!4.10e-46!180;CL:0000057!3.75e-26!75;CL:0000222!1.81e-24!119;CL:0000220!2.15e-16!246;CL:0000680!5.21e-16!57;CL:0000056!5.21e-16!57;CL:0000355!5.21e-16!57;CL:0002321!5.50e-16!248;CL:0000187!2.52e-15!54;CL:0000183!2.96e-15!59;CL:0000192!2.29e-14!42;CL:0000514!2.29e-14!42;CL:0000393!4.84e-14!60;CL:0000211!4.84e-14!60;CL:0000359!2.50e-12!32;CL:0002620!6.14e-11!23;CL:0000144!4.19e-10!625;CL:0002371!1.41e-08!591;CL:0000213!1.73e-08!57;CL:0000215!1.73e-08!57;CL:0000548!5.87e-08!679;CL:0000004!5.87e-08!679;CL:0000255!5.87e-08!679;CL:0002334!9.04e-08!12;CL:0000012!1.59e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.92e-12;32!CL:0002620;1.70e-11;23!CL:0000057;2.48e-11;73!CL:0000192;4.69e-11;43!CL:0000187;4.61e-09;55!CL:0000134;1.11e-08;55!CL:0002320;1.72e-08;188!CL:0002334;4.00e-08;12!CL:0000048;5.59e-08;58!CL:0000723;8.60e-08;61!CL:0000393;2.19e-07;61!CL:0000211;2.19e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.08e-28,76;CL:0000222,3.84e-25,121;CL:0000680,5.16e-17,58;CL:0000056,5.16e-17,58;CL:0000355,5.16e-17,58;CL:0000187,2.75e-16,55;CL:0000192,2.93e-15,43;CL:0000514,2.93e-15,43;CL:0000393,4.93e-14,61;CL:0000211,4.93e-14,61;CL:0002321,6.04e-14,250;CL:0000359,6.11e-13,32;CL:0002620,1.80e-11,23;CL:0000213,2.99e-08,58;CL:0000215,2.99e-08,58;CL:0002334,4.00e-08,12;CL:0000048,3.24e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;4.69e-11;43!CL:0000355;3.67e-09;58!CL:0000222;3.59e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!3.62e-07!14 | |ontology_enrichment_disease=DOID:2394!3.62e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.81e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.73e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.04e-22!79;UBERON:0007798!5.04e-22!79;UBERON:0004872!1.92e-18!84;UBERON:0000914!3.38e-18!83;UBERON:0002329!3.38e-18!83;UBERON:0003077!3.38e-18!83;UBERON:0003059!3.38e-18!83;UBERON:0007282!3.38e-18!83;UBERON:0009618!3.38e-18!83;UBERON:0007285!3.38e-18!83;UBERON:0000055!5.70e-18!69;UBERON:0004290!6.40e-17!70;UBERON:0005256!1.42e-16!143;UBERON:0004535!1.77e-16!110;UBERON:0001981!3.83e-16!60;UBERON:0007500!3.83e-16!60;UBERON:0004537!3.83e-16!60;UBERON:0006965!3.83e-16!60;UBERON:0003914!1.03e-15!118;UBERON:0001009!1.54e-15!113;UBERON:0001134!4.42e-15!61;UBERON:0002036!4.42e-15!61;UBERON:0003082!4.42e-15!61;UBERON:0002385!1.55e-14!63;UBERON:0001015!1.55e-14!63;UBERON:0000383!1.55e-14!63;UBERON:0000486!1.75e-14!82;UBERON:0001637!3.60e-14!42;UBERON:0003509!3.60e-14!42;UBERON:0004572!3.60e-14!42;UBERON:0000490!1.02e-13!138;UBERON:0002100!3.36e-12!216;UBERON:0004573!1.18e-11!33;UBERON:0004571!1.18e-11!33;UBERON:0000475!2.64e-11!365;UBERON:0000468!1.65e-10!659;UBERON:0000119!1.65e-09!312;UBERON:0000481!2.78e-09!347;UBERON:0000483!6.88e-09!309;UBERON:0000477!7.22e-09!286;UBERON:0003104!1.02e-08!238;UBERON:0009142!1.02e-08!238;UBERON:0000947!1.45e-07!21;UBERON:0010191!1.45e-07!21;UBERON:0000467!2.35e-07!625;UBERON:0000480!3.64e-07!626;UBERON:0002199!5.46e-07!45;UBERON:0002416!5.46e-07!45;UBERON:0003102!5.82e-07!95 | |ontology_enrichment_uberon=UBERON:0002049!5.04e-22!79;UBERON:0007798!5.04e-22!79;UBERON:0004872!1.92e-18!84;UBERON:0000914!3.38e-18!83;UBERON:0002329!3.38e-18!83;UBERON:0003077!3.38e-18!83;UBERON:0003059!3.38e-18!83;UBERON:0007282!3.38e-18!83;UBERON:0009618!3.38e-18!83;UBERON:0007285!3.38e-18!83;UBERON:0000055!5.70e-18!69;UBERON:0004290!6.40e-17!70;UBERON:0005256!1.42e-16!143;UBERON:0004535!1.77e-16!110;UBERON:0001981!3.83e-16!60;UBERON:0007500!3.83e-16!60;UBERON:0004537!3.83e-16!60;UBERON:0006965!3.83e-16!60;UBERON:0003914!1.03e-15!118;UBERON:0001009!1.54e-15!113;UBERON:0001134!4.42e-15!61;UBERON:0002036!4.42e-15!61;UBERON:0003082!4.42e-15!61;UBERON:0002385!1.55e-14!63;UBERON:0001015!1.55e-14!63;UBERON:0000383!1.55e-14!63;UBERON:0000486!1.75e-14!82;UBERON:0001637!3.60e-14!42;UBERON:0003509!3.60e-14!42;UBERON:0004572!3.60e-14!42;UBERON:0000490!1.02e-13!138;UBERON:0002100!3.36e-12!216;UBERON:0004573!1.18e-11!33;UBERON:0004571!1.18e-11!33;UBERON:0000475!2.64e-11!365;UBERON:0000468!1.65e-10!659;UBERON:0000119!1.65e-09!312;UBERON:0000481!2.78e-09!347;UBERON:0000483!6.88e-09!309;UBERON:0000477!7.22e-09!286;UBERON:0003104!1.02e-08!238;UBERON:0009142!1.02e-08!238;UBERON:0000947!1.45e-07!21;UBERON:0010191!1.45e-07!21;UBERON:0000467!2.35e-07!625;UBERON:0000480!3.64e-07!626;UBERON:0002199!5.46e-07!45;UBERON:0002416!5.46e-07!45;UBERON:0003102!5.82e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.63e-11;33!UBERON:0004571;3.63e-11;33!UBERON:0001637;6.69e-11;42!UBERON:0003509;6.69e-11;42!UBERON:0004572;6.69e-11;42!UBERON:0002049;6.13e-10;75!UBERON:0007798;6.13e-10;75!UBERON:0007500;7.64e-10;56!UBERON:0001981;7.64e-10;56!UBERON:0004537;7.64e-10;56!UBERON:0000055;1.53e-09;65!UBERON:0002384;9.06e-09;198!UBERON:0000947;6.67e-08;21!UBERON:0010191;6.67e-08;21!UBERON:0003914;2.18e-07;74 | |||
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| ||
|short_description=p2@LOX | |short_description=p2@LOX | ||
}} | }} |
Latest revision as of 23:25, 19 September 2015
Short description: | p2@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOX_5end |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | 0bp_to_NM_002317, uc003ksu.2_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | D0PNI2P28300 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.08e-28 | 76 |
mesodermal cell | 3.84e-25 | 121 |
muscle precursor cell | 5.16e-17 | 58 |
myoblast | 5.16e-17 | 58 |
multi-potent skeletal muscle stem cell | 5.16e-17 | 58 |
muscle cell | 2.75e-16 | 55 |
smooth muscle cell | 2.93e-15 | 43 |
smooth muscle myoblast | 2.93e-15 | 43 |
electrically responsive cell | 4.93e-14 | 61 |
electrically active cell | 4.93e-14 | 61 |
embryonic cell | 6.04e-14 | 250 |
vascular associated smooth muscle cell | 6.11e-13 | 32 |
skin fibroblast | 1.80e-11 | 23 |
lining cell | 2.99e-08 | 58 |
barrier cell | 2.99e-08 | 58 |
preadipocyte | 4.00e-08 | 12 |
multi fate stem cell | 3.24e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.73e-07 | 14 |