FFCP PHASE1:Hg19::chr19:36606654..36606700,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:36606654..36606700,+
|short_description=p3@TBCB
|description=CAGE_peak_3_at_TBCB_5end
|association_with_transcript=0bp_to_uc002odh.1_5end
|EntrezGene=115...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1155 | |EntrezGene=1155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1989 | |HGNC=1989 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FGY5 | |UniProt=Q6FGY5 | ||
|association_with_transcript=0bp_to_uc002odh.1_5end | |||
|cluster_id=chr19:36606654..36606700,+ | |||
|description=CAGE_peak_3_at_TBCB_5end | |||
|id=chr19:36606654..36606700,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.51e-10!18;CL:0000789!3.51e-10!18;CL:0002420!3.51e-10!18;CL:0002419!3.51e-10!18;CL:0000790!3.51e-10!18;CL:0000084!3.65e-08!25;CL:0000827!3.65e-08!25;CL:0000625!4.88e-07!11;CL:0000838!8.19e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.55e-11;18!CL:0000789;6.55e-11;18!CL:0002419;6.55e-11;18!CL:0000084;7.40e-09;25!CL:0000625;2.01e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.31e-11,18;CL:0000789,8.31e-11,18;CL:0002420,8.31e-11,18;CL:0002419,8.31e-11,18;CL:0000790,8.31e-11,18;CL:0000084,1.14e-08,25;CL:0000827,1.14e-08,25;CL:0000625,1.94e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.55e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TBCB | |||
}} | }} |
Latest revision as of 15:46, 17 September 2015
Short description: | p3@TBCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBCB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002odh.1_5end |
EntrezGene: | TBCB |
HGNC: | 1989 |
UniProt: | Q6FGY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.31e-11 | 18 |
alpha-beta T cell | 8.31e-11 | 18 |
immature T cell | 8.31e-11 | 18 |
mature T cell | 8.31e-11 | 18 |
immature alpha-beta T cell | 8.31e-11 | 18 |
T cell | 1.14e-08 | 25 |
pro-T cell | 1.14e-08 | 25 |
CD8-positive, alpha-beta T cell | 1.94e-07 | 11 |