FFCP PHASE1:Hg19::chr19:36393422..36393439,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:36393422..36393439,+
|short_description=p1@HCST
|description=CAGE_peak_1_at_HCST_5end
|association_with_transcript=40bp_to_ENST00000246551,ENST00000437550...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10870 | |EntrezGene=10870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16977 | |HGNC=16977 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBK5 | |UniProt=Q9UBK5 | ||
|association_with_transcript=40bp_to_ENST00000246551,ENST00000437550,NM_001007469,NM_014266,uc002ock.1,uc002ocl.1_5end | |||
|cluster_id=chr19:36393422..36393439,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_HCST_5end | |||
|id=chr19:36393422..36393439,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.89e-77!172;CL:0000566!1.89e-77!172;CL:0002032!8.40e-73!165;CL:0000837!8.40e-73!165;CL:0000988!3.04e-70!182;CL:0000738!1.85e-65!140;CL:0002031!7.47e-57!124;CL:0002087!1.49e-55!119;CL:0000763!7.67e-47!112;CL:0000049!7.67e-47!112;CL:0000766!9.15e-37!76;CL:0000557!2.72e-33!71;CL:0000839!5.49e-33!70;CL:0002009!7.51e-31!65;CL:0002194!3.53e-30!63;CL:0000576!3.53e-30!63;CL:0000040!3.53e-30!63;CL:0000559!3.53e-30!63;CL:0002057!6.50e-28!42;CL:0000860!6.81e-25!45;CL:0000542!1.20e-21!53;CL:0000051!1.20e-21!53;CL:0000838!3.00e-21!52;CL:0000134!2.97e-16!358;CL:0002320!7.52e-15!365;CL:0000084!1.17e-13!25;CL:0000827!1.17e-13!25;CL:0000791!1.58e-12!18;CL:0000789!1.58e-12!18;CL:0002420!1.58e-12!18;CL:0002419!1.58e-12!18;CL:0000790!1.58e-12!18;CL:0000219!2.20e-11!390;CL:0000625!2.25e-09!11;CL:0002393!1.78e-07!9;CL:0002397!1.78e-07!9;CL:0000945!2.65e-07!24;CL:0000826!2.65e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.16e-22;33!CL:0002057;3.16e-22;33!CL:0000473;3.83e-22;39!CL:0000234;3.83e-22;39!CL:0000576;3.47e-21;48!CL:0000766;5.25e-19;69!CL:0002087;1.92e-17;104!CL:0000763;4.60e-16;100!CL:0000738;1.47e-15;136!CL:0000084;3.03e-15;25!CL:0000791;6.12e-14;18!CL:0000789;6.12e-14;18!CL:0002419;6.12e-14;18!CL:0000542;1.16e-13;53!CL:0000988;1.59e-13;177!CL:0000625;2.19e-10;11!CL:0000945;4.94e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.24e-88,168;CL:0002032,4.07e-83,161;CL:0000837,4.07e-83,161;CL:0000988,4.17e-80,177;CL:0000738,1.13e-75,136;CL:0002031,5.99e-66,120;CL:0002087,1.58e-64,115;CL:0000763,2.50e-55,108;CL:0000049,2.50e-55,108;CL:0000766,4.70e-45,72;CL:0000557,4.79e-41,67;CL:0000839,1.02e-40,66;CL:0002009,2.46e-38,61;CL:0002194,1.31e-37,59;CL:0000576,1.31e-37,59;CL:0000040,1.31e-37,59;CL:0000559,1.31e-37,59;CL:0000473,1.43e-35,48;CL:0000234,1.43e-35,48;CL:0000860,2.48e-31,42;CL:0002057,2.48e-31,42;CL:0000542,6.35e-23,53;CL:0000051,6.35e-23,53;CL:0000838,1.78e-22,52;CL:0000084,3.19e-15,25;CL:0000827,3.19e-15,25;CL:0000134,4.93e-14,354;CL:0000791,6.08e-14,18;CL:0000789,6.08e-14,18;CL:0002420,6.08e-14,18;CL:0002419,6.08e-14,18;CL:0000790,6.08e-14,18;CL:0002320,9.30e-13,361;CL:0000625,2.20e-10,11;CL:0000219,5.75e-09,386;CL:0002393,3.04e-08,9;CL:0002397,3.04e-08,9;CL:0000945,4.99e-07,24;CL:0000826,4.99e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-22;42!CL:0000049;1.89e-15;108!CL:0000790;6.12e-14;18!CL:0000051;1.16e-13;53 | |||
|ontology_enrichment_disease=DOID:1240!3.78e-12!39;DOID:2531!5.42e-12!51;DOID:0060083!5.42e-12!51;DOID:8692!6.12e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.09e-10;39!DOID:8692;3.75e-10;31!DOID:2531;8.07e-08;51!DOID:0060083;8.07e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.00e-13,39;DOID:2531,9.61e-12,51;DOID:0060083,9.61e-12,51;DOID:8692,1.55e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.14e-36!102;UBERON:0003061!8.14e-36!102;UBERON:0002193!2.93e-31!112;UBERON:0002371!9.35e-29!80;UBERON:0001474!1.06e-24!86;UBERON:0007023!1.51e-22!115;UBERON:0002405!1.70e-21!115;UBERON:0004765!1.89e-17!101;UBERON:0001434!1.89e-17!101;UBERON:0002384!1.17e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.89e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.04e-42,98;UBERON:0003061,2.04e-42,98;UBERON:0002193,3.94e-37,108;UBERON:0002371,1.53e-34,76;UBERON:0002405,1.69e-31,93;UBERON:0001474,1.11e-29,82;UBERON:0007023,1.08e-24,114;UBERON:0004765,2.57e-24,90;UBERON:0001434,3.78e-20,100;UBERON:0002384,9.68e-12,371;UBERON:0003081,6.54e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70627602516243,0,0,0,0,0.408001382488506,0,0,0,0.376627918784408,16.9637760760452,13.2181949014413,18.2609012647736,245.852673030565,237.206568024077,212.872169559604,0,0,0,31.5291506361828,15.0699386436667,134.46900121536,274.227727223279,257.900159446602,274.735762326268,41.424362734386,59.9203282135112,70.5757055317671,209.955056797691,170.799926547342,161.318400689898,234.28846920093,175.56868818532,196.353839147496,342.929331648003,235.155528593714,291.346107222737,230.979606093534,150.397931275031,216.682378550947,256.762551136113,189.942680440261,216.183992036171,293.840536676066,254.817647498418,221.849982652267,273.776579154974,212.428795367038,193.07981199131,351.443387979215,205.960836562884,193.697719437624,250.494919260973,250.311800841697,286.472086166049,266.375781158682,286.151723162338,315.196537891121,320.263014048904,319.54426284746,405.899137704216,329.79686104611,375.592408996607,221.640584055274,329.759744508625,173.654259194806,215.909029749797,42.2390986707174,40.4142572333977,40.02791642386,50.7808964854144,24.0237592221607,33.33564151736,46.2731410949403,46.7486339722328,17.6456020423929,33.4725197941435,20.2604810906371,142.745034865348,143.490192123273,65.8460211937693,92.2568821833877,121.833336452241,103.211952497754,141.941334586686,145.361330918581,176.122583733321,165.602719146725,168.006968982842,138.759382420648,148.64924326561,174.126884400905,137.570077385375,152.429555340177,430.33399634782,519.814383455181,283.717220934616,106.766325476684,100.060269705553,143.213667612818,256.53235186729,224.950429744328,193.118624361238,181.668138870003,323.662460953282,489.614757300027,602.586596180269,269.981188506447,283.490343707037,399.778324967507,323.437726292127,536.196581989443,328.01417122664,359.17218293725,222.305459960096,0,0,0,0,0.50133791063589,0,0,0,0,0,1.05401742831751,18.9264764094195,0,0,138.58173709055,135.821195093428,233.474178671127,99.9275715839383,131.558829479429,121.466602934768,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,93.5640963796049,174.501118866746,0,0,0.12663051166458,0,0,5.67469411517371,0,0,0,0,0,0,0.302714855289863,0,0,0,0.570471821544449,0.597794722207204,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.640672166455702,0.211931901159562,0.900273288253207,0.721367704669072,0.257640540045629,1.48893485065272,0,0.292311015483596,0,0.0920498986422993,0,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.580969714347592,0.414644220061482,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0.404493924480493,0,0,0.738155454624648,0,0.4115740113314,0,3.80265104465493,4.91413608338813,9.45263850690247,18.5414501754153,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,211.992842241249,411.613502379919,286.560880892668,0,0,0,0,0,0,251.258251326931,122.651468580424,119.213666435944,60.6745003885408,72.2106719198893,0,0,0,0,0,0,0,1.68196626518041,0,1.466765716419,0,0,0.845302752556,0,0,0.514414748524284,1.41849132023278,0,0,0,0,1.30294473717494,0,0,0,0,0.099972991182057,184.86814657461,146.156813606749,210.833939483032,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.537182889719687,171.26610002211,434.058764724846,374.113842381263,298.269216314135,0,0,0,0.502548796003046,0,39.6973722692007,41.8826042885635,77.9101165259747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,302.91515827003,238.795620306209,259.66814813578,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2785530921723,11.5031598450956,0,0,0,12.0557983627835,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,1.70453254832202,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.153645931591,0,0,0,0,0,3.16661452946496,0,0,0,0,6.70302275535787,0,8.75537347224046,0,0,0,0,162.890682563526,167.45554836418,139.56356085767,157.947667128514,207.737947908528,184.814893689924,202.511788964293,145.141907261851,0.106824071127473,0.962479855263359,0,63.9162922432472,3.17392268548179,6.26048221466044,13.7106594546787,73.4452086872765,163.354080722909,74.2974275360829,12.3356337304331,293.433051128564,119.36673713436,50.4509264389135,62.6586192725168,6.26379577865932,110.002831446034,50.2481270905708,2.98092366383228,367.207213543913,20.5851312086667,23.0386391129188,21.1898409974124,188.158735872165,136.419025208669,1.23087398947712,125.22097913438,25.6465415358321,155.085705596634,0,66.9542379272556,0.121360521749513,33.2101285146886,0,0,6.53322297831805,0.307160702099232,7.95318118213038,10.2688673979674,0.111308705022906,2.80166586185491,0,16.5375830248388,21.8264293269607,0,0,40.2487313857697,0.311039587661807,0.179736702294654,0,195.420645426665,10.1602707806042,313.722850974491,0,9.69332746095218,9.74065030699438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| ||
|short_description=p1@HCST | |||
}} | }} |
Latest revision as of 14:26, 17 September 2015
Short description: | p1@HCST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCST_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 40bp_to_ENST00000246551, ENST00000437550, NM_001007469, NM_014266, uc002ock.1, uc002ocl.1_5end |
EntrezGene: | HCST |
HGNC: | 16977 |
UniProt: | Q9UBK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.04e-42 | 98 |
blood island | 2.04e-42 | 98 |
hemolymphoid system | 3.94e-37 | 108 |
bone marrow | 1.53e-34 | 76 |
immune system | 1.69e-31 | 93 |
bone element | 1.11e-29 | 82 |
adult organism | 1.08e-24 | 114 |
skeletal element | 2.57e-24 | 90 |
skeletal system | 3.78e-20 | 100 |
connective tissue | 9.68e-12 | 371 |
lateral plate mesoderm | 6.54e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.00e-13 | 39 |
hematologic cancer | 9.61e-12 | 51 |
immune system cancer | 9.61e-12 | 51 |
myeloid leukemia | 1.55e-10 | 31 |