FFCP PHASE1:Hg19::chr4:83196097..83196106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-117bp_to_ENST00000504996_5end | |association_with_transcript=-117bp_to_ENST00000504996_5end | ||
|cluster_id=chr4:83196097..83196106,+ | |||
|coexpression_cluster_id=C590 | |coexpression_cluster_id=C590 | ||
|description=CAGE_peak_1_at_ENST00000504996_5end | |description=CAGE_peak_1_at_ENST00000504996_5end | ||
|id=chr4:83196097..83196106,+ | |id=chr4:83196097..83196106,+ | ||
|ontology_enrichment_celltype=CL:0000037!9.58e-38!172;CL:0000566!9.58e-38!172;CL:0000988!1.56e-34!182;CL:0002032!2.17e-34!165;CL:0000837!2.17e-34!165;CL:0002087!2.31e-33!119;CL:0000738!1.84e-32!140;CL:0000838!5.84e-29!52;CL:0000542!3.22e-28!53;CL:0000051!3.22e-28!53;CL:0002031!4.14e-28!124;CL:0002393!8.40e-17!9;CL:0002397!8.40e-17!9;CL:0000791!2.54e-16!18;CL:0000789!2.54e-16!18;CL:0002420!2.54e-16!18;CL:0002419!2.54e-16!18;CL:0000790!2.54e-16!18;CL:0000945!1.32e-13!24;CL:0000826!1.32e-13!24;CL:0000084!2.10e-12!25;CL:0000827!2.10e-12!25;CL:0000763!5.40e-11!112;CL:0000049!5.40e-11!112;CL:0000624!1.00e-10!6;CL:0002057!2.46e-10!42;CL:0000236!3.91e-10!14;CL:0000860!2.56e-09!45;CL:0000134!3.57e-08!358;CL:0002320!1.07e-07!365;CL:0000766!1.22e-07!76;CL:0000625!4.27e-07!11;CL:0000875!6.24e-07!3;CL:0002396!6.24e-07!3;CL:0000842!8.82e-07!3 | |ontology_enrichment_celltype=CL:0000037!9.58e-38!172;CL:0000566!9.58e-38!172;CL:0000988!1.56e-34!182;CL:0002032!2.17e-34!165;CL:0000837!2.17e-34!165;CL:0002087!2.31e-33!119;CL:0000738!1.84e-32!140;CL:0000838!5.84e-29!52;CL:0000542!3.22e-28!53;CL:0000051!3.22e-28!53;CL:0002031!4.14e-28!124;CL:0002393!8.40e-17!9;CL:0002397!8.40e-17!9;CL:0000791!2.54e-16!18;CL:0000789!2.54e-16!18;CL:0002420!2.54e-16!18;CL:0002419!2.54e-16!18;CL:0000790!2.54e-16!18;CL:0000945!1.32e-13!24;CL:0000826!1.32e-13!24;CL:0000084!2.10e-12!25;CL:0000827!2.10e-12!25;CL:0000763!5.40e-11!112;CL:0000049!5.40e-11!112;CL:0000624!1.00e-10!6;CL:0002057!2.46e-10!42;CL:0000236!3.91e-10!14;CL:0000860!2.56e-09!45;CL:0000134!3.57e-08!358;CL:0002320!1.07e-07!365;CL:0000766!1.22e-07!76;CL:0000625!4.27e-07!11;CL:0000875!6.24e-07!3;CL:0002396!6.24e-07!3;CL:0000842!8.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.77e-20;13!CL:0000945;3.03e-10;24!CL:0000542;1.16e-09;53!CL:0002393;1.84e-07;6!CL:0002397;1.84e-07;6!CL:0000875;2.18e-07;3!CL:0002396;2.18e-07;3!CL:0000226;6.75e-07;3!CL:0000842;6.75e-07;3!CL:0000623;8.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.21e-19,14;CL:0000838,2.41e-13,52;CL:0000542,4.90e-13,53;CL:0000051,4.90e-13,53;CL:0002393,6.27e-13,9;CL:0002397,6.27e-13,9;CL:0000738,6.76e-13,136;CL:0000037,1.24e-12,168;CL:0002087,6.00e-12,115;CL:0000988,1.10e-11,177;CL:0002032,5.00e-11,161;CL:0000837,5.00e-11,161;CL:0000945,1.78e-10,24;CL:0000826,1.78e-10,24;CL:0002031,7.93e-09,120;CL:0000875,2.09e-07,3;CL:0002396,2.09e-07,3;CL:0000226,5.33e-07,3;CL:0000842,5.33e-07,3;CL:0000623,7.83e-07,3;CL:0000825,7.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.16e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.63e-15!102;UBERON:0003061!2.63e-15!102;UBERON:0002193!6.35e-15!112;UBERON:0000178!1.26e-11!15;UBERON:0000179!1.26e-11!15;UBERON:0000463!1.26e-11!15;UBERON:0004177!9.09e-08!7;UBERON:0002384!4.71e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!2.63e-15!102;UBERON:0003061!2.63e-15!102;UBERON:0002193!6.35e-15!112;UBERON:0000178!1.26e-11!15;UBERON:0000179!1.26e-11!15;UBERON:0000463!1.26e-11!15;UBERON:0004177!9.09e-08!7;UBERON:0002384!4.71e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.37e-18;15!UBERON:0000179;9.37e-18;15!UBERON:0000463;9.37e-18;15!UBERON:0002390;4.04e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.64e-18,15;UBERON:0000179,9.64e-18,15;UBERON:0000463,9.64e-18,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,1.23852898652861,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.868043482863407,0,0.32389366601898,0,0.290796477559129,0,0.485168122375632,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0,0,0,0,2.74631872205524,3.18906449947565,2.09658645508376,0.336985893439485,0.300353785683013,0.32145117339416,0.570025487482497,6.56425034756997,4.93193215164512,0,1.09227722252426,1.77901850772711,2.56038133539904,1.60158394814405,0.574752439954483,0,1.90810750907073,1.70763890732835,1.76171156811282,2.6759125968766,0,0,0,0.590129310341499,0.786021525498329,1.43921049299656,6.52027332023645,0.32592226663359,0.946895611469467,0,2.89667187901451,3.24066498222321,3.1014745241707,4.06205795647523,2.0494611156108,2.47112760363769,0.657751618414705,1.65810010671509,2.02862160014537,0.889719378972363,1.07016331235885,1.04535523804977,3.05935225283429,0.383220493601921,0.34362744548263,4.04831507231205,0.95569624297229,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,1.61285394579786,1.06976078313403,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.985153801009636,2.15627574859517,1.66845947163673,0,0,0,0,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,1.72571360654893,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,2.27858874869665,2.1440859791201,2.46817363851717,0,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,1.14117339516596,0,0,0.169291777801603,0.642352300414798,0,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0.811367035427949,0.99921590399346,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,1.2558420511602,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.640150378164845,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0.258355639344024,0.31037357147929,0,0,0,0,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,1.23852898652861,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.868043482863407,0,0.32389366601898,0,0.290796477559129,0,0.485168122375632,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0,0,0,0,2.74631872205524,3.18906449947565,2.09658645508376,0.336985893439485,0.300353785683013,0.32145117339416,0.570025487482497,6.56425034756997,4.93193215164512,0,1.09227722252426,1.77901850772711,2.56038133539904,1.60158394814405,0.574752439954483,0,1.90810750907073,1.70763890732835,1.76171156811282,2.6759125968766,0,0,0,0.590129310341499,0.786021525498329,1.43921049299656,6.52027332023645,0.32592226663359,0.946895611469467,0,2.89667187901451,3.24066498222321,3.1014745241707,4.06205795647523,2.0494611156108,2.47112760363769,0.657751618414705,1.65810010671509,2.02862160014537,0.889719378972363,1.07016331235885,1.04535523804977,3.05935225283429,0.383220493601921,0.34362744548263,4.04831507231205,0.95569624297229,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,1.61285394579786,1.06976078313403,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.985153801009636,2.15627574859517,1.66845947163673,0,0,0,0,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,1.72571360654893,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,2.27858874869665,2.1440859791201,2.46817363851717,0,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,1.14117339516596,0,0,0.169291777801603,0.642352300414798,0,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0.811367035427949,0.99921590399346,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,1.2558420511602,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.640150378164845,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0.258355639344024,0.31037357147929,0,0,0,0,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p1@ENST00000504996 | |short_description=p1@ENST00000504996 | ||
}} | }} |
Latest revision as of 07:25, 30 July 2015
Short description: | p1@ENST00000504996 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000504996_5end |
Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
Association with transcript: | -117bp_to_ENST00000504996_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.21e-19 | 14 |
lymphoid lineage restricted progenitor cell | 2.41e-13 | 52 |
lymphocyte | 4.90e-13 | 53 |
common lymphoid progenitor | 4.90e-13 | 53 |
intermediate monocyte | 6.27e-13 | 9 |
CD14-positive, CD16-positive monocyte | 6.27e-13 | 9 |
leukocyte | 6.76e-13 | 136 |
hematopoietic stem cell | 1.24e-12 | 168 |
nongranular leukocyte | 6.00e-12 | 115 |
hematopoietic cell | 1.10e-11 | 177 |
hematopoietic oligopotent progenitor cell | 5.00e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.00e-11 | 161 |
lymphocyte of B lineage | 1.78e-10 | 24 |
pro-B cell | 1.78e-10 | 24 |
hematopoietic lineage restricted progenitor cell | 7.93e-09 | 120 |
non-classical monocyte | 2.09e-07 | 3 |
CD14-low, CD16-positive monocyte | 2.09e-07 | 3 |
single nucleate cell | 5.33e-07 | 3 |
mononuclear cell | 5.33e-07 | 3 |
natural killer cell | 7.83e-07 | 3 |
pro-NK cell | 7.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.64e-18 | 15 |
haemolymphatic fluid | 9.64e-18 | 15 |
organism substance | 9.64e-18 | 15 |