FFCP PHASE1:Hg19::chr19:36245682..36245706,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:36245682..36245706,-
|short_description=p1@CU679244
|description=CAGE_peak_1_at_CU679244_5end
|association_with_transcript=-308bp_to_CU679244_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-308bp_to_CU679244_5end | |||
|cluster_id=chr19:36245682..36245706,- | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_1_at_CU679244_5end | |||
|id=chr19:36245682..36245706,- | |||
|ontology_enrichment_celltype=CL:0000055!2.72e-16!180;CL:0000057!7.48e-13!75;CL:0000136!1.59e-11!15;CL:0000680!6.23e-10!57;CL:0000056!6.23e-10!57;CL:0000355!6.23e-10!57;CL:0000187!1.08e-09!54;CL:0000183!6.75e-09!59;CL:0000393!5.85e-08!60;CL:0000211!5.85e-08!60;CL:0002334!6.76e-08!12;CL:0000192!5.08e-07!42;CL:0000514!5.08e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.57e-12;12!CL:0000136;1.04e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.72e-14,15;CL:0002334,3.46e-12,12;CL:0000187,3.06e-08,55;CL:0000680,3.62e-08,58;CL:0000056,3.62e-08,58;CL:0000355,3.62e-08,58;CL:0000192,2.20e-07,43;CL:0000514,2.20e-07,43;CL:0000057,8.31e-07,76;CL:0000393,8.56e-07,61;CL:0000211,8.56e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!4.43e-13!63;UBERON:0001015!4.43e-13!63;UBERON:0000383!4.43e-13!63;UBERON:0001134!3.12e-12!61;UBERON:0002036!3.12e-12!61;UBERON:0003082!3.12e-12!61;UBERON:0004290!2.53e-11!70;UBERON:0000475!1.68e-10!365;UBERON:0000914!2.22e-10!83;UBERON:0002329!2.22e-10!83;UBERON:0003077!2.22e-10!83;UBERON:0003059!2.22e-10!83;UBERON:0007282!2.22e-10!83;UBERON:0009618!2.22e-10!83;UBERON:0007285!2.22e-10!83;UBERON:0007100!2.12e-09!27;UBERON:0007023!3.84e-09!115;UBERON:0000486!6.64e-09!82;UBERON:0005256!1.96e-08!143;UBERON:0002100!7.07e-08!216;UBERON:0001013!7.08e-08!14;UBERON:0000948!1.24e-07!24;UBERON:0005498!1.24e-07!24;UBERON:0004140!1.24e-07!24;UBERON:0009881!1.24e-07!24;UBERON:0004141!1.24e-07!24;UBERON:0003084!1.24e-07!24;UBERON:0007005!1.24e-07!24;UBERON:0004139!1.24e-07!24;UBERON:0004291!1.24e-07!24;UBERON:0000481!2.03e-07!347;UBERON:0000468!2.32e-07!659;UBERON:0000479!3.48e-07!787;UBERON:0003103!8.10e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.43e-10;9!UBERON:0000042;3.43e-10;9!UBERON:0001013;2.51e-09;14!UBERON:0003688;2.61e-09;6!UBERON:0002358;2.61e-09;6!UBERON:0003684;2.61e-09;6!UBERON:0001178;2.61e-09;6!UBERON:0002072;1.69e-07;5!UBERON:0002385;4.62e-07;31!UBERON:0001015;4.62e-07;31!UBERON:0000383;4.62e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,1.72e-11,64;UBERON:0001015,1.72e-11,64;UBERON:0000383,1.72e-11,64;UBERON:0001134,4.84e-11,62;UBERON:0002036,4.84e-11,62;UBERON:0003082,4.84e-11,62;UBERON:0003104,1.17e-10,160;UBERON:0009142,1.17e-10,160;UBERON:0005256,1.19e-10,122;UBERON:0007524,1.68e-10,73;UBERON:0000926,2.52e-10,315;UBERON:0004120,2.52e-10,315;UBERON:0006603,2.52e-10,315;UBERON:0002329,2.81e-10,71;UBERON:0003059,2.81e-10,71;UBERON:0007282,2.81e-10,71;UBERON:0004290,2.81e-10,71;UBERON:0009618,2.81e-10,71;UBERON:0003077,5.20e-10,72;UBERON:0007285,5.20e-10,72;UBERON:0001013,2.36e-09,14;UBERON:0003688,2.80e-09,6;UBERON:0002358,2.80e-09,6;UBERON:0003684,2.80e-09,6;UBERON:0001178,2.80e-09,6;UBERON:0007503,2.92e-09,78;UBERON:0000486,4.12e-09,83;UBERON:0002100,1.61e-08,199;UBERON:0002072,1.52e-07,5;UBERON:0004457,4.25e-07,12;UBERON:0000042,4.25e-07,12 | |||
|phase1_expression=5.26867299884614,15.8434387679328,15.6459388546528,5.00366491765652,15.6436383049551,6.97870819280295,7.59899634504932,3.79031924056099,14.626395179191,0.245733936501509,0,0.218441372130172,0.263766978228454,0.618831764800233,0.662794751455832,3.36162573225888,0.602694528023977,1.46062018077475,1.46379839637152,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.01210257911091,0.895037932904712,4.3372698286148,0.50133791063589,6.0835537963546,0,0,0.189069634328136,0,0.527008714158756,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,5.4666914686485,2.27934920996244,1.05927344650575,2.86836620748814,8.15737279056221,1.12135520028461,0,0.74000264525148,0.311211035399766,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0.234321431833797,1.87296046098192,0,6.27684458317565,0.117434498643765,0.161872944368132,0,0.204154171254893,0.491337269247072,0.619954687054593,0,0.494533858557114,0,1.43723628363248,0,0.250237039743928,0,0,0,0.901428353439581,0.453728732640084,0,0.213557388818567,1.27159140695737,0.900273288253207,0.824420233907511,1.54584324027377,0.930584281657949,0.168776332241266,0.584622030967192,1.00973509697646,1.38074847963449,1.2931684545505,0.710019185033229,0.906768884048762,0.67824236924195,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,8.35862270457562,12.9938306700525,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,4.41026134156626,0,0,1.18157981336281,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0.2933531432838,0,3.57656445851882,0.845302752556,4.5209479819428,9.36066932202295,0.257207374262142,0,0.799266537048298,22.8764789853036,8.68194568626309,1.64648067356154,0.325736184293735,9.24019066730619,0.791951872933429,0,0,0.099972991182057,0,0,0,0.958499421966331,3.44585807502342,0,0.723906533337896,1.2328579353023,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.96306386750624,5.50187573165645,2.44138521329762,0.831883446123229,0.713715955188647,0.157702415033935,0,0,2.27407504055985,1.03473071292505,2.65690239414175,0.184369168541703,2.34585759063824,0.195801157462741,0,0,0,0,0,0,0.604780586659361,4.46594054073798,1.07423381301644,5.89386198309454,13.9671672688714,2.55853624533352,19.3024705372329,0,4.1636617326717,4.43904313282818,4.10635780069046,4.15403543346897,3.25389059687886,0,0,0,0.229628896329213,2.91345868810747,8.1297137274843,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,4.82051789532479,1.7400729292582,0.308097234229289,0.921022048356777,0,0.429680979473094,2.17525040871343,0.681813019328807,1.06838442776085,0,0,0,0,15.8047486761077,3.77774816196768,0,0.308033580176089,0,0,0.74129687641568,0,0.372158369359667,0.316379424718726,2.47819252100972,1.535386747868,13.2661086290515,1.27281299170375,0,0.719489830333259,4.11805544604082,2.12062324222236,0.202182481573316,0,0,0.975267478179181,1.21856744815642,1.05650146756755,1.77449884830381,8.9085422130839,2.26016233240486,0,0,0,5.78775534266688,5.24715801637306,0,0.30982349809975,0,1.72093622644862,2.75097314836739,0,3.54761064070598,20.6885482591711,3.29294892959902,1.13841952129715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0,0,0,4.38345574152353,0,0,0,0,0.311039587661807,0,0,0,2.86065876347107,0,0,0,0.278304294485554,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53900517007594,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,0,0,0.123563938946503,0,0,4.01288823649394,0,0,0,0,1.57833761139756,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,5.2418000472609,4.98759494167688,0,0,0,0.775912131907355,0,2.03382666702479,0,0,0.126621591911757,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,2.79282401272254,15.3537484087828,0.717873024576814,10.5829870264465,33.4796317546525,0.89268582976749,0.201550417460179,3.60299883542404,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,2.85878130549347,6.62091970365432,0,35.837973715745,8.64221491201268,28.0865129694092,0,0,1.87426823963964,0.226624183040251,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.157204305099666,1.65695622138878,0.992332043623902,0,0,0,1.63205341010842,1.2534494701135,0.919036730290385,0.655745261419609,0,0,1.22026264901963,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,1.19403842309499,1.8697064787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| ||
|short_description=p1@CU679244 | |||
}} | }} |
Latest revision as of 06:49, 26 July 2015
Short description: | p1@CU679244 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU679244_5end |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | -308bp_to_CU679244_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.72e-14 | 15 |
preadipocyte | 3.46e-12 | 12 |
muscle cell | 3.06e-08 | 55 |
muscle precursor cell | 3.62e-08 | 58 |
myoblast | 3.62e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.62e-08 | 58 |
smooth muscle cell | 2.20e-07 | 43 |
smooth muscle myoblast | 2.20e-07 | 43 |
fibroblast | 8.31e-07 | 76 |
electrically responsive cell | 8.56e-07 | 61 |
electrically active cell | 8.56e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 1.72e-11 | 64 |
musculature | 1.72e-11 | 64 |
musculature of body | 1.72e-11 | 64 |
skeletal muscle tissue | 4.84e-11 | 62 |
striated muscle tissue | 4.84e-11 | 62 |
myotome | 4.84e-11 | 62 |
mesenchyme | 1.17e-10 | 160 |
entire embryonic mesenchyme | 1.17e-10 | 160 |
trunk mesenchyme | 1.19e-10 | 122 |
dense mesenchyme tissue | 1.68e-10 | 73 |
mesoderm | 2.52e-10 | 315 |
mesoderm-derived structure | 2.52e-10 | 315 |
presumptive mesoderm | 2.52e-10 | 315 |
somite | 2.81e-10 | 71 |
presomitic mesoderm | 2.81e-10 | 71 |
presumptive segmental plate | 2.81e-10 | 71 |
dermomyotome | 2.81e-10 | 71 |
trunk paraxial mesoderm | 2.81e-10 | 71 |
paraxial mesoderm | 5.20e-10 | 72 |
presumptive paraxial mesoderm | 5.20e-10 | 72 |
adipose tissue | 2.36e-09 | 14 |
omentum | 2.80e-09 | 6 |
peritoneum | 2.80e-09 | 6 |
abdominal cavity | 2.80e-09 | 6 |
visceral peritoneum | 2.80e-09 | 6 |
epithelial vesicle | 2.92e-09 | 78 |
multilaminar epithelium | 4.12e-09 | 83 |
trunk | 1.61e-08 | 199 |
hypodermis | 1.52e-07 | 5 |
cavity lining | 4.25e-07 | 12 |
serous membrane | 4.25e-07 | 12 |