FFCP PHASE1:Hg19::chr4:69313145..69313164,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28983 | |EntrezGene=28983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24465 | |HGNC=24465 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL52 | |UniProt=Q9UL52 | ||
|association_with_transcript=-2bp_to_ENST00000305363,NM_014058,uc003hdz.3_5end | |association_with_transcript=-2bp_to_ENST00000305363,NM_014058,uc003hdz.3_5end | ||
|cluster_id=chr4:69313145..69313164,+ | |||
|coexpression_cluster_id=C629 | |coexpression_cluster_id=C629 | ||
|description=CAGE_peak_2_at_TMPRSS11E_5end | |description=CAGE_peak_2_at_TMPRSS11E_5end | ||
|id=chr4:69313145..69313164,+ | |id=chr4:69313145..69313164,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.01e-18!43;CL:0000223!5.29e-13!59;CL:0002251!1.21e-12!21;CL:0000066!5.49e-10!254;CL:0000244!4.82e-08!4;CL:0000731!4.82e-08!4;CL:0002368!7.02e-08!13;CL:0002621!6.64e-07!3;CL:0002166!6.90e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.01e-18!43;CL:0000223!5.29e-13!59;CL:0002251!1.21e-12!21;CL:0000066!5.49e-10!254;CL:0000244!4.82e-08!4;CL:0000731!4.82e-08!4;CL:0002368!7.02e-08!13;CL:0002621!6.64e-07!3;CL:0002166!6.90e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002166;2.23e-13;3!CL:0002537;3.66e-09;5!CL:0002251;2.31e-07;20!CL:0002076;2.33e-07;42!CL:0002621;5.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.68e-13,3;CL:0002537,3.71e-09,5;CL:0002076,2.29e-08,42;CL:0002251,2.50e-07,20;CL:0002621,5.66e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.01e-15!14 | |ontology_enrichment_disease=DOID:1749!5.01e-15!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.77e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.39e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!5.47e-22!35;UBERON:0000166!2.41e-21!21;UBERON:0000165!9.23e-17!28;UBERON:0000930!9.23e-17!28;UBERON:0001004!1.80e-14!72;UBERON:0001044!1.19e-11!6;UBERON:0003293!1.19e-11!6;UBERON:0003294!1.19e-11!6;UBERON:0010047!1.19e-11!6;UBERON:0000167!1.19e-11!6;UBERON:0004119!1.50e-11!169;UBERON:0000925!1.50e-11!169;UBERON:0006595!1.50e-11!169;UBERON:0000974!7.14e-11!10;UBERON:0003408!8.94e-11!10;UBERON:0003729!5.69e-10!5;UBERON:0000078!2.01e-09!18;UBERON:0003102!3.28e-09!95;UBERON:0001444!7.75e-09!48;UBERON:0003343!1.52e-08!4;UBERON:0004785!1.52e-08!4;UBERON:0005631!8.94e-08!14;UBERON:0000158!8.94e-08!14;UBERON:0003101!1.08e-07!22;UBERON:0000079!1.08e-07!22;UBERON:0006562!1.63e-07!11;UBERON:0000305!1.91e-07!7;UBERON:0000344!2.68e-07!12;UBERON:0003135!4.08e-07!11;UBERON:0001723!4.47e-07!3;UBERON:0001033!4.47e-07!3;UBERON:0010056!4.47e-07!3;UBERON:0001949!6.64e-07!3 | |ontology_enrichment_uberon=UBERON:0000161!5.47e-22!35;UBERON:0000166!2.41e-21!21;UBERON:0000165!9.23e-17!28;UBERON:0000930!9.23e-17!28;UBERON:0001004!1.80e-14!72;UBERON:0001044!1.19e-11!6;UBERON:0003293!1.19e-11!6;UBERON:0003294!1.19e-11!6;UBERON:0010047!1.19e-11!6;UBERON:0000167!1.19e-11!6;UBERON:0004119!1.50e-11!169;UBERON:0000925!1.50e-11!169;UBERON:0006595!1.50e-11!169;UBERON:0000974!7.14e-11!10;UBERON:0003408!8.94e-11!10;UBERON:0003729!5.69e-10!5;UBERON:0000078!2.01e-09!18;UBERON:0003102!3.28e-09!95;UBERON:0001444!7.75e-09!48;UBERON:0003343!1.52e-08!4;UBERON:0004785!1.52e-08!4;UBERON:0005631!8.94e-08!14;UBERON:0000158!8.94e-08!14;UBERON:0003101!1.08e-07!22;UBERON:0000079!1.08e-07!22;UBERON:0006562!1.63e-07!11;UBERON:0000305!1.91e-07!7;UBERON:0000344!2.68e-07!12;UBERON:0003135!4.08e-07!11;UBERON:0001723!4.47e-07!3;UBERON:0001033!4.47e-07!3;UBERON:0010056!4.47e-07!3;UBERON:0001949!6.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.95e-21;19!UBERON:0000166;1.95e-21;19!UBERON:0000165;1.90e-20;28!UBERON:0001044;7.41e-18;6!UBERON:0003293;7.41e-18;6!UBERON:0003294;7.41e-18;6!UBERON:0010047;7.41e-18;6!UBERON:0003408;7.41e-18;6!UBERON:0000167;7.41e-18;6!UBERON:0005631;3.80e-11;10!UBERON:0000158;3.80e-11;10!UBERON:0001041;8.73e-11;14!UBERON:0000305;9.22e-11;7!UBERON:0001708;3.70e-10;4!UBERON:0008895;3.70e-10;4!UBERON:0001829;1.17e-09;2!UBERON:0011159;3.23e-08;5!UBERON:0000974;1.82e-07;6!UBERON:0001723;3.45e-07;3!UBERON:0001033;3.45e-07;3!UBERON:0001949;5.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,1.53e-27,36;UBERON:0000166,1.02e-26,22;UBERON:0000165,1.21e-19,29;UBERON:0000930,1.21e-19,29;UBERON:0001044,7.84e-18,6;UBERON:0003293,7.84e-18,6;UBERON:0003294,7.84e-18,6;UBERON:0010047,7.84e-18,6;UBERON:0000167,7.84e-18,6;UBERON:0000153,1.18e-14,62;UBERON:0007811,1.18e-14,62;UBERON:0003102,1.52e-14,99;UBERON:0000033,2.34e-14,56;UBERON:0001004,3.43e-13,74;UBERON:0000305,1.10e-10,7;UBERON:0003408,1.31e-10,10;UBERON:0001444,1.36e-10,49;UBERON:0001708,3.00e-10,4;UBERON:0008895,3.00e-10,4;UBERON:0004119,4.96e-10,160;UBERON:0000925,4.96e-10,160;UBERON:0006595,4.96e-10,160;UBERON:0001829,9.39e-10,2;UBERON:0004871,2.35e-09,8;UBERON:0001007,2.47e-08,145;UBERON:0001555,2.47e-08,145;UBERON:0007026,2.47e-08,145;UBERON:0011159,2.74e-08,5;UBERON:0005631,7.42e-08,14;UBERON:0000158,7.42e-08,14;UBERON:0001723,3.40e-07,3;UBERON:0001033,3.40e-07,3;UBERON:0010056,3.40e-07,3;UBERON:0010188,5.61e-07,6;UBERON:0002539,5.61e-07,6;UBERON:0008816,5.61e-07,6;UBERON:0001949,5.66e-07,3;UBERON:0004921,9.75e-07,118 | |||
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| ||
|short_description=p2@TMPRSS11E | |short_description=p2@TMPRSS11E | ||
}} | }} |
Latest revision as of 07:52, 18 September 2015
Short description: | p2@TMPRSS11E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMPRSS11E_5end |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | -2bp_to_ENST00000305363, NM_014058, uc003hdz.3_5end |
EntrezGene: | TMPRSS11E |
HGNC: | 24465 |
UniProt: | Q9UL52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.68e-13 | 3 |
amnion mesenchymal stem cell | 3.71e-09 | 5 |
endo-epithelial cell | 2.29e-08 | 42 |
epithelial cell of alimentary canal | 2.50e-07 | 20 |
gingival epithelial cell | 5.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.39e-11 | 14 |