FFCP PHASE1:Hg19::chr4:4501551..4501558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:4501551..4501558,- | |||
|coexpression_cluster_id=C630 | |coexpression_cluster_id=C630 | ||
|description=CAGE_peak_at_chr4:4501551..4501558,- | |description=CAGE_peak_at_chr4:4501551..4501558,- | ||
|id=chr4:4501551..4501558,- | |id=chr4:4501551..4501558,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.66e-29!2;UBERON:0002426!6.44e-16!1;UBERON:0003831!6.44e-16!1;UBERON:0003898!6.44e-16!1;UBERON:0004830!6.44e-16!1;UBERON:0001774!6.44e-16!1;UBERON:0003830!6.44e-16!1;UBERON:0005175!6.44e-16!1;UBERON:0003897!6.44e-16!1;UBERON:0001103!6.44e-16!1;UBERON:0010084!6.44e-16!1;UBERON:0000029!7.46e-16!1;UBERON:0002171!9.99e-16!1;UBERON:0006518!9.99e-16!1;UBERON:0008949!9.99e-16!1;UBERON:0000101!9.99e-16!1;UBERON:0002167!9.99e-16!1;UBERON:0006834!1.34e-15!1;UBERON:0002372!3.66e-15!1;UBERON:0001961!3.66e-15!1;UBERON:0001744!3.66e-15!1;UBERON:0001735!3.66e-15!1;UBERON:0007023!4.34e-09!115;UBERON:0001630!1.29e-08!2;UBERON:0005090!1.29e-08!2;UBERON:0003127!2.87e-08!2;UBERON:0000915!8.60e-07!52;UBERON:0005181!9.36e-07!35 | |ontology_enrichment_uberon=UBERON:0000341!1.66e-29!2;UBERON:0002426!6.44e-16!1;UBERON:0003831!6.44e-16!1;UBERON:0003898!6.44e-16!1;UBERON:0004830!6.44e-16!1;UBERON:0001774!6.44e-16!1;UBERON:0003830!6.44e-16!1;UBERON:0005175!6.44e-16!1;UBERON:0003897!6.44e-16!1;UBERON:0001103!6.44e-16!1;UBERON:0010084!6.44e-16!1;UBERON:0000029!7.46e-16!1;UBERON:0002171!9.99e-16!1;UBERON:0006518!9.99e-16!1;UBERON:0008949!9.99e-16!1;UBERON:0000101!9.99e-16!1;UBERON:0002167!9.99e-16!1;UBERON:0006834!1.34e-15!1;UBERON:0002372!3.66e-15!1;UBERON:0001961!3.66e-15!1;UBERON:0001744!3.66e-15!1;UBERON:0001735!3.66e-15!1;UBERON:0007023!4.34e-09!115;UBERON:0001630!1.29e-08!2;UBERON:0005090!1.29e-08!2;UBERON:0003127!2.87e-08!2;UBERON:0000915!8.60e-07!52;UBERON:0005181!9.36e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;4.53e-08;33!UBERON:0003133;2.32e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,4.27e-34,6;UBERON:0001560,4.27e-34,6;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p@chr4:4501551..4501558,- | |short_description=p@chr4:4501551..4501558,- | ||
}} | }} |
Latest revision as of 05:23, 30 July 2015
Short description: | p@chr4:4501551..4501558, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:4501551..4501558, - |
Coexpression cluster: | C630_cervix_uterus_salivary_extraskeletal_tongue_esophagus_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine cervix | 4.27e-34 | 6 |
neck of organ | 4.27e-34 | 6 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |