FFCP PHASE1:Hg19::chr4:4388780..4388789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27065 | |EntrezGene=27065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000513829_5end | |association_with_transcript=14bp_to_ENST00000513829_5end | ||
|cluster_id=chr4:4388780..4388789,+ | |||
|coexpression_cluster_id=C4417 | |coexpression_cluster_id=C4417 | ||
|description=CAGE_peak_7_at_D4S234E_5end | |description=CAGE_peak_7_at_D4S234E_5end | ||
|id=chr4:4388780..4388789,+ | |id=chr4:4388780..4388789,+ | ||
|ontology_enrichment_celltype=CL:0000150!5.06e-08!9 | |ontology_enrichment_celltype=CL:0000150!5.06e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.96e-13;10!CL:0000147;5.33e-09;14!CL:0002536;3.34e-08;2!CL:1000413;9.00e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.31e-13,10;CL:0000541,4.31e-13,10;CL:0000147,3.83e-09,14;CL:0002536,2.42e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.69e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.84e-13!169;UBERON:0000924!1.30e-12!173;UBERON:0006601!1.30e-12!173;UBERON:0005631!1.71e-09!14;UBERON:0000158!1.71e-09!14;UBERON:0000073!4.05e-09!94;UBERON:0001016!4.05e-09!94;UBERON:0001017!2.90e-08!82;UBERON:0005743!6.21e-08!86;UBERON:0001049!1.08e-07!57;UBERON:0005068!1.08e-07!57;UBERON:0006241!1.08e-07!57;UBERON:0007135!1.08e-07!57;UBERON:0003124!4.67e-07!7 | |ontology_enrichment_uberon=UBERON:0004121!8.84e-13!169;UBERON:0000924!1.30e-12!173;UBERON:0006601!1.30e-12!173;UBERON:0005631!1.71e-09!14;UBERON:0000158!1.71e-09!14;UBERON:0000073!4.05e-09!94;UBERON:0001016!4.05e-09!94;UBERON:0001017!2.90e-08!82;UBERON:0005743!6.21e-08!86;UBERON:0001049!1.08e-07!57;UBERON:0005068!1.08e-07!57;UBERON:0006241!1.08e-07!57;UBERON:0007135!1.08e-07!57;UBERON:0003124!4.67e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004733;4.95e-10;12!UBERON:0002028;4.95e-10;12!UBERON:0002680;1.14e-09;9!UBERON:0001895;1.14e-09;9!UBERON:0004732;3.28e-09;13!UBERON:0000305;1.98e-08;7!UBERON:0000007;2.36e-08;2!UBERON:0003915;9.00e-07;9!UBERON:0004700;9.00e-07;9!UBERON:0001917;9.00e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,8.15e-11,15;UBERON:0003057,8.15e-11,15;UBERON:0004733,2.60e-10,12;UBERON:0002028,2.60e-10,12;UBERON:0007277,2.60e-10,12;UBERON:0002680,6.25e-10,9;UBERON:0001895,6.25e-10,9;UBERON:0010092,6.25e-10,9;UBERON:0004732,1.83e-09,13;UBERON:0005631,6.57e-09,14;UBERON:0000158,6.57e-09,14;UBERON:0001017,2.14e-08,81;UBERON:0000305,2.15e-08,7;UBERON:0000007,2.60e-08,2;UBERON:0001016,2.62e-08,89;UBERON:0004121,2.87e-08,171;UBERON:0000924,2.87e-08,171;UBERON:0006601,2.87e-08,171;UBERON:0004871,2.40e-07,8;UBERON:0011216,6.06e-07,223 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,1.96587149201207,2.09340350391728,2.18441372130172,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.535081656179426,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0.318565414324097,0,0,0.150575119077773,1.15187950038977,1.24930726552346,1.18388626022008,0.821127996921047,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,3.35599548967925,1.10047216776027,2.29894463190492,0,0,0,0,0,0,0,2.43042584364528,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,1.48181739276657,1.9615428373615,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7223723958405,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,1.73934767846967,0.272746120590835,0.860413786167011,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.502644862058154,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0.268675568108545,0,0,0,0,0,0.144119953416961,0,1.90493682876507,1.52795370223311,2.34434894420094,0,2.67351481028641,5.1058319833466,3.42991719156694,0.112131084345361,0,0,0,0,0,0,0,0,0,0,1.00084595560703,0,0,0,0.710783897485092,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,2.60279707715243,0,1.67516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,3.32870879020994,3.32629322662648,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,1.15314040419064,0.510450849978337,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41757669408298,2.74537029736055,0.589062011728432,0,0,0,1.46290121726877,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.384888450902048,0,0,0.188287601553558,0.86101074534246,0,1.33029046061003,0,0,0,0,0.476463550915578,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0.865615277858669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,2.07875276582847,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,9.98068990005971,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0,1.52581736317083,1.3269511191747,4.13766666534966,1.09692698576986,0,0.697118721393016,0.0769502585037971,0,0,0,0.54323685961004,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.202203398942031,0.802577647298789,1.87411556580271,0,0,0,0,0,2.14250933141343,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0.335434687599266,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.665574309221114,1.55241007353459,0.138348634936231,1.12482367165896,0,0.856396000634902,0,0,0.579684114443301,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0.300515217994437,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.539124056983409,0.471797825567689,0.109209638192014,0,0,0.495743057036009,3.35186950783946,0,0,0,0,13.781046480894,0.642292250964595,0,0,0,0.504143392443436,0.207471757392654,0.161475645631851,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0.300841313397029,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.443910671357348,1.64092442705466,0,0,0,0,0,0,1.21393120847326,3.87025725297206,0.975726071789027,0.115233987555779,0,1.97112225632812,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0.348724276104376,0,0,1.24329698497822,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.971421986118279,0.233939463462106,0,0.118920090777569,0.67767649223376,0,0,0.154348316215889,0.437119121007915,0,0,0.235676547101626,0,0.297046400327086,1.2679671827502,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0.271965960763659,1.30905207102113,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0,0.091894899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| ||
|short_description=p7@D4S234E | |short_description=p7@D4S234E | ||
}} | }} |
Latest revision as of 20:51, 17 September 2015
Short description: | p7@D4S234E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_D4S234E_5end |
Coexpression cluster: | C4417_normal_duodenum_brain_temporal_pituitary_putamen_Placental |
Association with transcript: | 14bp_to_ENST00000513829_5end |
EntrezGene: | D4S234E |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.31e-13 | 10 |
melanoblast | 4.31e-13 | 10 |
pigment cell | 3.83e-09 | 14 |
amniotic epithelial cell | 2.42e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 8.15e-11 | 15 |
chordal neural plate | 8.15e-11 | 15 |
segmental subdivision of hindbrain | 2.60e-10 | 12 |
hindbrain | 2.60e-10 | 12 |
presumptive hindbrain | 2.60e-10 | 12 |
regional part of metencephalon | 6.25e-10 | 9 |
metencephalon | 6.25e-10 | 9 |
future metencephalon | 6.25e-10 | 9 |
segmental subdivision of nervous system | 1.83e-09 | 13 |
extraembryonic membrane | 6.57e-09 | 14 |
membranous layer | 6.57e-09 | 14 |
central nervous system | 2.14e-08 | 81 |
amnion | 2.15e-08 | 7 |
pituitary gland | 2.60e-08 | 2 |
nervous system | 2.62e-08 | 89 |
ectoderm-derived structure | 2.87e-08 | 171 |
ectoderm | 2.87e-08 | 171 |
presumptive ectoderm | 2.87e-08 | 171 |
somatic layer of lateral plate mesoderm | 2.40e-07 | 8 |
organ system subdivision | 6.06e-07 | 223 |