FFCP PHASE1:Hg19::chr4:40232957..40232960,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:40232957..40232960,+ | |||
|coexpression_cluster_id=C996 | |coexpression_cluster_id=C996 | ||
|description=CAGE_peak_at_chr4:40232957..40232960,+ | |description=CAGE_peak_at_chr4:40232957..40232960,+ | ||
|id=chr4:40232957..40232960,+ | |id=chr4:40232957..40232960,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.38e-48!172;CL:0000566!1.38e-48!172;CL:0002032!1.05e-46!165;CL:0000837!1.05e-46!165;CL:0002087!2.39e-45!119;CL:0000738!3.49e-45!140;CL:0000988!8.28e-45!182;CL:0002031!1.07e-44!124;CL:0000542!2.98e-43!53;CL:0000051!2.98e-43!53;CL:0000838!2.88e-42!52;CL:0000945!7.99e-22!24;CL:0000826!7.99e-22!24;CL:0000084!6.19e-18!25;CL:0000827!6.19e-18!25;CL:0000791!3.40e-17!18;CL:0000789!3.40e-17!18;CL:0002420!3.40e-17!18;CL:0002419!3.40e-17!18;CL:0000790!3.40e-17!18;CL:0000236!2.73e-15!14;CL:0000763!1.62e-12!112;CL:0000049!1.62e-12!112;CL:0000625!5.92e-12!11;CL:0000839!1.41e-10!70;CL:0002057!1.50e-10!42;CL:0000766!2.20e-10!76;CL:0000134!1.17e-09!358;CL:0000557!1.33e-09!71;CL:0000860!2.53e-09!45;CL:0002320!6.21e-09!365;CL:0000624!2.80e-08!6;CL:0002194!9.21e-08!63;CL:0000576!9.21e-08!63;CL:0000040!9.21e-08!63;CL:0000559!9.21e-08!63;CL:0002009!2.85e-07!65;CL:0000219!8.61e-07!390 | |ontology_enrichment_celltype=CL:0000037!1.38e-48!172;CL:0000566!1.38e-48!172;CL:0002032!1.05e-46!165;CL:0000837!1.05e-46!165;CL:0002087!2.39e-45!119;CL:0000738!3.49e-45!140;CL:0000988!8.28e-45!182;CL:0002031!1.07e-44!124;CL:0000542!2.98e-43!53;CL:0000051!2.98e-43!53;CL:0000838!2.88e-42!52;CL:0000945!7.99e-22!24;CL:0000826!7.99e-22!24;CL:0000084!6.19e-18!25;CL:0000827!6.19e-18!25;CL:0000791!3.40e-17!18;CL:0000789!3.40e-17!18;CL:0002420!3.40e-17!18;CL:0002419!3.40e-17!18;CL:0000790!3.40e-17!18;CL:0000236!2.73e-15!14;CL:0000763!1.62e-12!112;CL:0000049!1.62e-12!112;CL:0000625!5.92e-12!11;CL:0000839!1.41e-10!70;CL:0002057!1.50e-10!42;CL:0000766!2.20e-10!76;CL:0000134!1.17e-09!358;CL:0000557!1.33e-09!71;CL:0000860!2.53e-09!45;CL:0002320!6.21e-09!365;CL:0000624!2.80e-08!6;CL:0002194!9.21e-08!63;CL:0000576!9.21e-08!63;CL:0000040!9.21e-08!63;CL:0000559!9.21e-08!63;CL:0002009!2.85e-07!65;CL:0000219!8.61e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.97e-30;53!CL:0000945;5.20e-28;24!CL:0000236;1.95e-22;13!CL:0000791;2.99e-22;18!CL:0000789;2.99e-22;18!CL:0002419;2.99e-22;18!CL:0000084;4.78e-17;25!CL:0000624;3.58e-14;6!CL:0000625;4.22e-12;11!CL:0002087;6.93e-12;104!CL:0000623;3.41e-08;3!CL:0000738;5.05e-08;136!CL:0000898;1.66e-07;3!CL:0000226;2.92e-07;3!CL:0000842;2.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.89e-51,53;CL:0000051,4.89e-51,53;CL:0000838,2.42e-49,52;CL:0002087,1.26e-37,115;CL:0000738,9.44e-36,136;CL:0002031,6.59e-34,120;CL:0000037,1.06e-29,168;CL:0000945,4.90e-28,24;CL:0000826,4.90e-28,24;CL:0002032,1.52e-27,161;CL:0000837,1.52e-27,161;CL:0000988,2.25e-27,177;CL:0000791,2.64e-22,18;CL:0000789,2.64e-22,18;CL:0002420,2.64e-22,18;CL:0002419,2.64e-22,18;CL:0000790,2.64e-22,18;CL:0000236,9.59e-21,14;CL:0000084,5.09e-17,25;CL:0000827,5.09e-17,25;CL:0000624,4.36e-14,6;CL:0000625,3.30e-12,11;CL:0000623,3.58e-08,3;CL:0000825,3.58e-08,3;CL:0000898,1.94e-07,3;CL:0000226,2.75e-07,3;CL:0000842,2.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;6.97e-30;53!CL:0000790;2.99e-22;18 | |||
|ontology_enrichment_disease=DOID:2531!1.11e-07!51;DOID:0060083!1.11e-07!51 | |ontology_enrichment_disease=DOID:2531!1.11e-07!51;DOID:0060083!1.11e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-16!102;UBERON:0003061!1.72e-16!102;UBERON:0002193!4.37e-15!112;UBERON:0000178!8.83e-09!15;UBERON:0000179!8.83e-09!15;UBERON:0000463!8.83e-09!15;UBERON:0002384!2.34e-08!375;UBERON:0002371!5.60e-08!80;UBERON:0001474!2.43e-07!86;UBERON:0002405!3.19e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.72e-16!102;UBERON:0003061!1.72e-16!102;UBERON:0002193!4.37e-15!112;UBERON:0000178!8.83e-09!15;UBERON:0000179!8.83e-09!15;UBERON:0000463!8.83e-09!15;UBERON:0002384!2.34e-08!375;UBERON:0002371!5.60e-08!80;UBERON:0001474!2.43e-07!86;UBERON:0002405!3.19e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.96e-12;15!UBERON:0000179;5.96e-12;15!UBERON:0000463;5.96e-12;15!UBERON:0002346;1.12e-08;4!UBERON:0000923;1.12e-08;4!UBERON:0010316;1.12e-08;4!UBERON:0005291;1.12e-08;4!UBERON:0002390;1.51e-07;32!UBERON:0002050;6.25e-07;5!UBERON:0005423;6.25e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.66e-12,15;UBERON:0000179,5.66e-12,15;UBERON:0000463,5.66e-12,15;UBERON:0002390,4.32e-09,98;UBERON:0003061,4.32e-09,98;UBERON:0002193,1.21e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,1.39571002064908,1.41679406364623,0,0.383829398097213,0.309632246632152,0,0,0,3.56349122669387,10.5205232040692,0.293600439334847,2.76997704265939,2.00544447470142,3.68918480216948,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0.619412741790207,3.45230870786581,1.7931249457037,0.47296445977717,0,1.29096936716765,0,0,0,0.224723484445085,1.22433556948361,0.962787081228281,3.19668562899521,0.989553900560148,0.997318288108159,0.852449501065388,0.290209238628584,0.56738522469114,0,3.76872997885115,2.60741459210101,0.868755378820466,2.42159801053347,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0,0.285012743741249,0,0,5.27988733383968,3.82297027883492,2.66852776159066,4.26730222566507,1.20118796110804,2.87376219977242,3.30522436392431,1.90810750907073,21.630092826159,13.5064553555316,10.7036503875064,0,1.68152568894461,0.526768169550154,10.4256178160332,16.1134412727158,6.16804496998528,1.00311897234407,3.2592226663359,3.78758244587787,7.79306913631645,1.78256731016278,5.59751224202191,3.32300841875432,2.97884250141517,4.09892223122161,4.81219585971549,4.93313713811028,4.69795030235942,2.31842468588042,2.07601188426885,5.61835738988397,1.04535523804977,1.47302145506836,2.29932296161153,2.06176467289578,2.53019692019503,1.59282707162048,4.55758417699493,0.950452044448374,0.752875595388864,0.511946444617674,3.74792179657038,1.65744076430812,3.28451198768419,5.64498881029251,14.9766509638764,10.5721814834443,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.179117045405697,0,0,0.985326475791887,0.528290604079356,2.28060927094849,7.78247748451592,3.40854570251226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13764596424047,12.506399341852,9.49738468470138,1.01637849688985,0,0.773288812777695,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,5.60856922128404,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,2.62054953003568,3.70226045777575,1.94541993357815,1.62009431171434,3.17250070517708,0.213648142254946,0,0,2.22963810150862,0.865615277858669,0.640276590135727,0.478278818186467,0,0.383010740264733,1.69338866179106,0,1.12318871245384,0,0.156679895773023,2.50634477090067,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,2.48655523978033,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,4.95727842751532,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0.470940769185074,0.664846727600626,0,0.19606253431774,0.335643173951685,0.37950746544837,0.635746315921515,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0,0,0,1.094728735294,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.970817393606503,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.393709926058995,1.18542664892098,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.992332043623902,1.38328142328561,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.314531883711793,0,2.0367903594483,1.70059936081346,3.84200869202907,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11045493231545,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0.603851374266694,0.463044948647668,0.218559560503957,0,0,0.235676547101626,0,0.297046400327086,0,0,0.563903507879121,0.193373663920732,4.09758739292209,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0.426467963801962,0.23806443146374,1.48554492622814,2.23468971465088,0,0,0.202117188958219,0,0,0.942928742204225,0.143444410785353,0,0,0,0,0,0,0,0,0,0.805095174364105,3.20568492303233 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095174364105,3.20568492303233 | ||
|short_description=p@chr4:40232957..40232960,+ | |short_description=p@chr4:40232957..40232960,+ | ||
}} | }} |
Latest revision as of 05:09, 30 July 2015
Short description: | p@chr4:40232957..40232960, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:40232957..40232960, + |
Coexpression cluster: | C996_CD4_CD8_Natural_CD19_Whole_blood_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.89e-51 | 53 |
common lymphoid progenitor | 4.89e-51 | 53 |
lymphoid lineage restricted progenitor cell | 2.42e-49 | 52 |
nongranular leukocyte | 1.26e-37 | 115 |
leukocyte | 9.44e-36 | 136 |
hematopoietic lineage restricted progenitor cell | 6.59e-34 | 120 |
hematopoietic stem cell | 1.06e-29 | 168 |
lymphocyte of B lineage | 4.90e-28 | 24 |
pro-B cell | 4.90e-28 | 24 |
hematopoietic oligopotent progenitor cell | 1.52e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-27 | 161 |
hematopoietic cell | 2.25e-27 | 177 |
mature alpha-beta T cell | 2.64e-22 | 18 |
alpha-beta T cell | 2.64e-22 | 18 |
immature T cell | 2.64e-22 | 18 |
mature T cell | 2.64e-22 | 18 |
immature alpha-beta T cell | 2.64e-22 | 18 |
B cell | 9.59e-21 | 14 |
T cell | 5.09e-17 | 25 |
pro-T cell | 5.09e-17 | 25 |
CD4-positive, alpha-beta T cell | 4.36e-14 | 6 |
CD8-positive, alpha-beta T cell | 3.30e-12 | 11 |
natural killer cell | 3.58e-08 | 3 |
pro-NK cell | 3.58e-08 | 3 |
naive T cell | 1.94e-07 | 3 |
single nucleate cell | 2.75e-07 | 3 |
mononuclear cell | 2.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.66e-12 | 15 |
haemolymphatic fluid | 5.66e-12 | 15 |
organism substance | 5.66e-12 | 15 |
hematopoietic system | 4.32e-09 | 98 |
blood island | 4.32e-09 | 98 |
hemolymphoid system | 1.21e-07 | 108 |