FFCP PHASE1:Hg19::chr19:35819950..35819960,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:35819950..35819960,+
|short_description=p5@CD22
|description=CAGE_peak_5_at_CD22_5end
|association_with_transcript=-111bp_to_ENST00000085219,ENST000003417...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=933 | |EntrezGene=933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1643 | |HGNC=1643 | ||
|TSSclassifier=strong | |||
|UniProt=P20273,F5H7U3,F5GYU4,Q32M46,Q0EAF5 | |UniProt=P20273,F5H7U3,F5GYU4,Q32M46,Q0EAF5 | ||
|association_with_transcript=-111bp_to_ENST00000085219,ENST00000341773,ENST00000536635,ENST00000544992,NM_001185099,NM_001185100,NM_001185101,NM_001771_5end | |||
|cluster_id=chr19:35819950..35819960,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_5_at_CD22_5end | |||
|id=chr19:35819950..35819960,+ | |||
|ontology_enrichment_celltype=CL:0002274!8.55e-30!5;CL:0000457!8.55e-30!5;CL:0002191!8.55e-30!5;CL:0000097!8.55e-30!5;CL:0000831!8.55e-30!5;CL:0002028!8.55e-30!5;CL:0000945!1.56e-23!24;CL:0000826!1.56e-23!24;CL:0000163!1.10e-16!9;CL:0000838!4.57e-13!52;CL:0000542!8.52e-13!53;CL:0000051!8.52e-13!53;CL:0002031!4.21e-12!124;CL:0000946!8.14e-11!1;CL:0000786!8.14e-11!1;CL:0000980!8.14e-11!1;CL:0000738!1.85e-10!140;CL:0002032!5.96e-10!165;CL:0000837!5.96e-10!165;CL:0000037!1.91e-09!172;CL:0000566!1.91e-09!172;CL:0000988!8.67e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.48e-40;5!CL:0000163;2.62e-23;9!CL:0000151;2.32e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.48e-40,5;CL:0002028,1.48e-40,5;CL:0000163,2.62e-23,9;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!1.30e-10!1;DOID:0050177!1.30e-10!1;DOID:0050427!1.30e-10!1;DOID:2355!1.73e-10!1;DOID:0060058!7.23e-09!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!3.61e-10!1;UBERON:0001961!3.61e-10!1;UBERON:0001744!3.61e-10!1;UBERON:0001735!3.61e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@CD22 | |||
}} | }} |
Latest revision as of 11:54, 17 September 2015
Short description: | p5@CD22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD22_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -111bp_to_ENST00000085219, ENST00000341773, ENST00000536635, ENST00000544992, NM_001185099, NM_001185100, NM_001185101, NM_001771_5end |
EntrezGene: | CD22 |
HGNC: | 1643 |
UniProt: | P20273F5H7U3F5GYU4Q32M46Q0EAF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.48e-40 | 5 |
basophil mast progenitor cell | 1.48e-40 | 5 |
endocrine cell | 2.62e-23 | 9 |
secretory cell | 5.81e-07 | 36 |