FFCP PHASE1:Hg19::chr4:140375103..140375117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-204bp_to_AK097885_5end | |association_with_transcript=-204bp_to_AK097885_5end | ||
|cluster_id=chr4:140375103..140375117,- | |||
|coexpression_cluster_id=C593 | |coexpression_cluster_id=C593 | ||
|description=CAGE_peak_4_at_AK097885_5end | |description=CAGE_peak_4_at_AK097885_5end | ||
|id=chr4:140375103..140375117,- | |id=chr4:140375103..140375117,- | ||
|ontology_enrichment_celltype=CL:0000542!2.96e-15!53;CL:0000051!2.96e-15!53;CL:0000838!5.99e-15!52;CL:0000738!8.38e-08!140;CL:0000084!1.16e-07!25;CL:0000827!1.16e-07!25;CL:0000791!1.57e-07!18;CL:0000789!1.57e-07!18;CL:0002420!1.57e-07!18;CL:0002419!1.57e-07!18;CL:0000790!1.57e-07!18;CL:0000236!1.69e-07!14;CL:0002087!3.87e-07!119;CL:0000945!8.11e-07!24;CL:0000826!8.11e-07!24 | |ontology_enrichment_celltype=CL:0000542!2.96e-15!53;CL:0000051!2.96e-15!53;CL:0000838!5.99e-15!52;CL:0000738!8.38e-08!140;CL:0000084!1.16e-07!25;CL:0000827!1.16e-07!25;CL:0000791!1.57e-07!18;CL:0000789!1.57e-07!18;CL:0002420!1.57e-07!18;CL:0002419!1.57e-07!18;CL:0000790!1.57e-07!18;CL:0000236!1.69e-07!14;CL:0002087!3.87e-07!119;CL:0000945!8.11e-07!24;CL:0000826!8.11e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.12e-13;6!CL:0000791;7.02e-13;18!CL:0000789;7.02e-13;18!CL:0002419;7.02e-13;18!CL:0000084;6.98e-12;25!CL:0000542;1.02e-10;53!CL:0000784;7.65e-08;3!CL:0000898;1.64e-07;3!CL:0000623;2.66e-07;3!CL:0000226;5.68e-07;3!CL:0000842;5.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.36e-16,52;CL:0000542,1.98e-15,53;CL:0000051,1.98e-15,53;CL:0000624,1.05e-13,6;CL:0000791,4.94e-13,18;CL:0000789,4.94e-13,18;CL:0002420,4.94e-13,18;CL:0002419,4.94e-13,18;CL:0000790,4.94e-13,18;CL:0000084,5.20e-12,25;CL:0000827,5.20e-12,25;CL:0000738,2.82e-09,136;CL:0000784,7.84e-08,3;CL:0000898,1.52e-07,3;CL:0002087,1.81e-07,115;CL:0000623,2.69e-07,3;CL:0000825,2.69e-07,3;CL:0000226,5.30e-07,3;CL:0000842,5.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.02e-13;18!CL:0000051;1.02e-10;53 | |||
|ontology_enrichment_disease=DOID:305!5.61e-13!106;DOID:0050687!1.19e-08!143 | |ontology_enrichment_disease=DOID:305!5.61e-13!106;DOID:0050687!1.19e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,1.53531759238885,0.77408061658038,0,0.30120591877825,0,1.93668001450754,0.284338464974843,0.587200878669695,0.553995408531877,1.20326668482085,1.30206522429511,0,0.32389366601898,0,0,0,0.242584061187816,0,0.411167888021826,0,0.863077176966451,0.256160706529101,0.945928919554341,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0,0.182664153764634,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,1.72425731986345,1.98313461835459,0.954053754535364,11.384259382189,6.45960908308033,12.6150165281326,2.64342657158052,1.12101712596307,0.263384084775077,5.70458333330116,9.03924754323079,12.130488440971,0.334372990781356,7.82213439920617,5.20792586308207,3.89653456815823,0.111410456885174,4.71369451959739,1.99380505125259,6.22848886659536,0.768547918354051,0.780356085359269,0.493313713811028,0.829050053357545,0.289803085735052,6.67289534229272,4.28065324943541,1.04535523804977,0.679856056185397,4.98186641682498,4.12352934579156,5.31341353240956,1.91139248594458,0,3.8018081777935,0.451725357233318,0.639933055772092,0,0.473554504088034,0,8.0642697289893,8.55808626507223,5.79297615531196,0,0,0,0,0,0,0,0.973269740605272,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,11.4475499666564,6.29194401858141,8.17206502925043,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.673588117878509,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.860413786167011,0.487894824518382,0,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.723033089650446,0.220587945464788,0.217879444092406,0.949082476444386,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,5.07020139287323,0.982827216677626,5.31710916013264,0.882926198829301,0.368965315629341,0,0,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,4.3346767244424,3.45004119775228,4.62034930607094,0,0,0,0,0,3.74503511973591,0,1.65766205374414,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,3.8828556147351,2.881644060693,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.200506470303285,0.460404944679482,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0.522870902049801,0,0,0,1.854738209659,0,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.330569830721956,0.576570202095319,1.53135254993501,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,1.22386941009813,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0,0.648473311192717,1.62009431171434,0.79312517629427,0,0.962479855263359,0.490080431962063,0.557409525377156,0.28853842595289,1.35169502361987,0.318852545457645,0,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0.228234679033192,0,0,0.50787533340481,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0.121360521749513,0.445773537109913,0,1.19372242368845,0,3.37876772309155,0,0.562677665642051,0,0.329607748453519,3.3780065300479,0.19924798825107,3.03912307084262,5.79445320064835,0,0.492339221844278,0,0.808815160325942,1.25314822272926,0,0,0,0,0,0.185536196323703,0,2.60427761085233,1.13697999995054,0,0.1137934482855,0.508507300585533,0.945550727071745,0,1.16641845353302,0,0,1.68835014075571,3.05163472634166,2.21158519862449,1.18219047581419,0.219385397153973,0.544692317594951,1.95193241990045,0.384751292518985,0.113942055847001,0.23056390438806,0.269272933229316,0,1.27600463892768,0,1.06606955203727,3.06579894587209,0,0.498635045700469,0,0.588187602953219,0.335643173951685,0.75901493089674,0,0,0.489698424477443,0.706765357169704,0.432777279484182,0.995261931078505,1.06149077404007,1.22206028986725,0,0.123563938946503,0.208843899010911,0.134802265961354,0,0,0.547364367646998,0.586993856796269,0.242780379534093,0,3.62972148145992,0,0,0.60129367765797,0.207376382794494,0,0.330991955875499,0.627865836814451,0,0.853828638089378,0,0.173559738335131,1.07791637155815,0.870592065804026,0.17472666824203,0.51595809741485,0.6772943190235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| ||
|short_description=p4@AK097885 | |short_description=p4@AK097885 | ||
}} | }} |
Latest revision as of 01:45, 30 July 2015
Short description: | p4@AK097885 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AK097885_5end |
Coexpression cluster: | C593_Dendritic_CD8_Natural_CD4_CD19_Basophils_Peripheral |
Association with transcript: | -204bp_to_AK097885_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.36e-16 | 52 |
lymphocyte | 1.98e-15 | 53 |
common lymphoid progenitor | 1.98e-15 | 53 |
CD4-positive, alpha-beta T cell | 1.05e-13 | 6 |
mature alpha-beta T cell | 4.94e-13 | 18 |
alpha-beta T cell | 4.94e-13 | 18 |
immature T cell | 4.94e-13 | 18 |
mature T cell | 4.94e-13 | 18 |
immature alpha-beta T cell | 4.94e-13 | 18 |
T cell | 5.20e-12 | 25 |
pro-T cell | 5.20e-12 | 25 |
leukocyte | 2.82e-09 | 136 |
plasmacytoid dendritic cell | 7.84e-08 | 3 |
naive T cell | 1.52e-07 | 3 |
nongranular leukocyte | 1.81e-07 | 115 |
natural killer cell | 2.69e-07 | 3 |
pro-NK cell | 2.69e-07 | 3 |
single nucleate cell | 5.30e-07 | 3 |
mononuclear cell | 5.30e-07 | 3 |