FFCP PHASE1:Hg19::chr4:10182011..10182023,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:10182011..10182023,- | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr4:10182011..10182023,- | |description=CAGE_peak_at_chr4:10182011..10182023,- | ||
|id=chr4:10182011..10182023,- | |id=chr4:10182011..10182023,- | ||
|ontology_enrichment_celltype=CL:0000055!3.95e-20!180;CL:0000057!3.61e-19!75;CL:0000359!1.18e-16!32;CL:0000048!9.96e-13!430;CL:0000723!2.43e-12!436;CL:0002620!3.24e-12!23;CL:0002594!3.76e-12!4;CL:0000034!7.64e-12!444;CL:0000192!9.15e-12!42;CL:0000514!9.15e-12!42;CL:0002334!2.90e-10!12;CL:0000680!4.76e-10!57;CL:0000056!4.76e-10!57;CL:0000355!4.76e-10!57;CL:0000767!7.20e-09!3;CL:0000187!2.47e-08!54;CL:0002494!8.66e-08!16;CL:0000183!2.48e-07!59;CL:0000393!3.75e-07!60;CL:0000211!3.75e-07!60;CL:1000306!4.16e-07!4;CL:0002547!4.16e-07!4;CL:0002371!5.15e-07!591;CL:0000569!6.92e-07!4;CL:0000011!6.92e-07!4;CL:0002589!9.62e-07!2 | |ontology_enrichment_celltype=CL:0000055!3.95e-20!180;CL:0000057!3.61e-19!75;CL:0000359!1.18e-16!32;CL:0000048!9.96e-13!430;CL:0000723!2.43e-12!436;CL:0002620!3.24e-12!23;CL:0002594!3.76e-12!4;CL:0000034!7.64e-12!444;CL:0000192!9.15e-12!42;CL:0000514!9.15e-12!42;CL:0002334!2.90e-10!12;CL:0000680!4.76e-10!57;CL:0000056!4.76e-10!57;CL:0000355!4.76e-10!57;CL:0000767!7.20e-09!3;CL:0000187!2.47e-08!54;CL:0002494!8.66e-08!16;CL:0000183!2.48e-07!59;CL:0000393!3.75e-07!60;CL:0000211!3.75e-07!60;CL:1000306!4.16e-07!4;CL:0002547!4.16e-07!4;CL:0002371!5.15e-07!591;CL:0000569!6.92e-07!4;CL:0000011!6.92e-07!4;CL:0002589!9.62e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000306;4.23e-13;4!CL:0002547;4.23e-13;4!CL:0002581;5.06e-13;1!CL:0000359;3.99e-12;32!CL:0000192;1.73e-08;43!CL:0002589;3.81e-07;2!CL:0002494;3.93e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.76e-13,1;CL:1000306,4.24e-13,4;CL:0002547,4.24e-13,4;CL:0000359,6.32e-13,32;CL:0000192,1.58e-09,43;CL:0000514,1.58e-09,43;CL:0000057,4.82e-09,76;CL:0000187,2.31e-07,55;CL:0002494,3.81e-07,16;CL:0002589,4.42e-07,2;CL:0000680,5.83e-07,58;CL:0000056,5.83e-07,58;CL:0000355,5.83e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.73e-08;43 | |||
|ontology_enrichment_disease=DOID:17!2.06e-13!5;DOID:450!2.06e-13!5;DOID:66!2.06e-13!5;DOID:423!2.06e-13!5;DOID:0080000!2.06e-13!5;DOID:11722!2.06e-13!5 | |ontology_enrichment_disease=DOID:17!2.06e-13!5;DOID:450!2.06e-13!5;DOID:66!2.06e-13!5;DOID:423!2.06e-13!5;DOID:0080000!2.06e-13!5;DOID:11722!2.06e-13!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.30e-17!42;UBERON:0003509!1.30e-17!42;UBERON:0004572!1.30e-17!42;UBERON:0004872!1.11e-15!84;UBERON:0001981!8.89e-14!60;UBERON:0007500!8.89e-14!60;UBERON:0004537!8.89e-14!60;UBERON:0006965!8.89e-14!60;UBERON:0001310!3.76e-12!4;UBERON:0004573!7.07e-12!33;UBERON:0004571!7.07e-12!33;UBERON:0000055!2.68e-11!69;UBERON:0004535!2.01e-10!110;UBERON:0001009!5.67e-10!113;UBERON:0003914!3.05e-09!118;UBERON:0002049!3.13e-09!79;UBERON:0007798!3.13e-09!79;UBERON:0001134!4.07e-09!61;UBERON:0002036!4.07e-09!61;UBERON:0003082!4.07e-09!61;UBERON:0002385!1.07e-08!63;UBERON:0001015!1.07e-08!63;UBERON:0000383!1.07e-08!63;UBERON:0000948!8.29e-08!24;UBERON:0005498!8.29e-08!24;UBERON:0004140!8.29e-08!24;UBERON:0009881!8.29e-08!24;UBERON:0004141!8.29e-08!24;UBERON:0003084!8.29e-08!24;UBERON:0007005!8.29e-08!24;UBERON:0004139!8.29e-08!24;UBERON:0004291!8.29e-08!24;UBERON:0004290!1.99e-07!70;UBERON:0000914!2.46e-07!83;UBERON:0002329!2.46e-07!83;UBERON:0003077!2.46e-07!83;UBERON:0003059!2.46e-07!83;UBERON:0007282!2.46e-07!83;UBERON:0009618!2.46e-07!83;UBERON:0007285!2.46e-07!83;UBERON:0000415!4.16e-07!4;UBERON:0007240!4.16e-07!4;UBERON:0005742!4.16e-07!4;UBERON:0005734!4.16e-07!4;UBERON:0004664!4.16e-07!4;UBERON:0004663!4.16e-07!4;UBERON:0007100!9.47e-07!27;UBERON:0001529!9.62e-07!2;UBERON:0007204!9.62e-07!2 | |ontology_enrichment_uberon=UBERON:0001637!1.30e-17!42;UBERON:0003509!1.30e-17!42;UBERON:0004572!1.30e-17!42;UBERON:0004872!1.11e-15!84;UBERON:0001981!8.89e-14!60;UBERON:0007500!8.89e-14!60;UBERON:0004537!8.89e-14!60;UBERON:0006965!8.89e-14!60;UBERON:0001310!3.76e-12!4;UBERON:0004573!7.07e-12!33;UBERON:0004571!7.07e-12!33;UBERON:0000055!2.68e-11!69;UBERON:0004535!2.01e-10!110;UBERON:0001009!5.67e-10!113;UBERON:0003914!3.05e-09!118;UBERON:0002049!3.13e-09!79;UBERON:0007798!3.13e-09!79;UBERON:0001134!4.07e-09!61;UBERON:0002036!4.07e-09!61;UBERON:0003082!4.07e-09!61;UBERON:0002385!1.07e-08!63;UBERON:0001015!1.07e-08!63;UBERON:0000383!1.07e-08!63;UBERON:0000948!8.29e-08!24;UBERON:0005498!8.29e-08!24;UBERON:0004140!8.29e-08!24;UBERON:0009881!8.29e-08!24;UBERON:0004141!8.29e-08!24;UBERON:0003084!8.29e-08!24;UBERON:0007005!8.29e-08!24;UBERON:0004139!8.29e-08!24;UBERON:0004291!8.29e-08!24;UBERON:0004290!1.99e-07!70;UBERON:0000914!2.46e-07!83;UBERON:0002329!2.46e-07!83;UBERON:0003077!2.46e-07!83;UBERON:0003059!2.46e-07!83;UBERON:0007282!2.46e-07!83;UBERON:0009618!2.46e-07!83;UBERON:0007285!2.46e-07!83;UBERON:0000415!4.16e-07!4;UBERON:0007240!4.16e-07!4;UBERON:0005742!4.16e-07!4;UBERON:0005734!4.16e-07!4;UBERON:0004664!4.16e-07!4;UBERON:0004663!4.16e-07!4;UBERON:0007100!9.47e-07!27;UBERON:0001529!9.62e-07!2;UBERON:0007204!9.62e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.38e-15;33!UBERON:0004571;4.38e-15;33!UBERON:0001637;7.54e-14;42!UBERON:0003509;7.54e-14;42!UBERON:0004572;7.54e-14;42!UBERON:0004797;4.23e-13;4!UBERON:0000415;4.23e-13;4!UBERON:0007240;4.23e-13;4!UBERON:0005742;4.23e-13;4!UBERON:0005734;4.23e-13;4!UBERON:0004664;4.23e-13;4!UBERON:0004663;4.23e-13;4!UBERON:0000947;2.21e-09;21!UBERON:0010191;2.21e-09;21!UBERON:0007500;4.81e-08;56!UBERON:0001981;4.81e-08;56!UBERON:0004537;4.81e-08;56!UBERON:0005406;3.81e-07;2!UBERON:0001529;3.81e-07;2!UBERON:0007204;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.20e-17,42;UBERON:0003509,3.20e-17,42;UBERON:0004572,3.20e-17,42;UBERON:0004573,4.66e-17,33;UBERON:0004571,4.66e-17,33;UBERON:0000415,4.24e-13,4;UBERON:0007240,4.24e-13,4;UBERON:0005742,4.24e-13,4;UBERON:0005734,4.24e-13,4;UBERON:0004664,4.24e-13,4;UBERON:0004663,4.24e-13,4;UBERON:0004872,5.97e-13,83;UBERON:0007500,5.10e-12,59;UBERON:0001981,5.10e-12,59;UBERON:0004537,5.10e-12,59;UBERON:0006965,5.10e-12,59;UBERON:0000055,2.59e-10,68;UBERON:0004535,1.49e-09,109;UBERON:0000947,2.14e-09,21;UBERON:0010191,2.14e-09,21;UBERON:0001009,2.92e-09,112;UBERON:0002049,7.06e-09,78;UBERON:0007798,7.06e-09,78;UBERON:0003914,8.27e-09,117;UBERON:0004797,7.30e-08,7;UBERON:0005406,3.28e-07,2;UBERON:0001529,4.42e-07,2;UBERON:0007204,4.42e-07,2 | |||
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|short_description=p@chr4:10182011..10182023,- | |short_description=p@chr4:10182011..10182023,- | ||
}} | }} |
Latest revision as of 00:24, 30 July 2015
Short description: | p@chr4:10182011..10182023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:10182011..10182023, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.76e-13 | 1 |
fibroblast of tunica adventitia of artery | 4.24e-13 | 4 |
fibroblast of the aortic adventitia | 4.24e-13 | 4 |
vascular associated smooth muscle cell | 6.32e-13 | 32 |
smooth muscle cell | 1.58e-09 | 43 |
smooth muscle myoblast | 1.58e-09 | 43 |
fibroblast | 4.82e-09 | 76 |
muscle cell | 2.31e-07 | 55 |
cardiocyte | 3.81e-07 | 16 |
smooth muscle cell of the brachiocephalic vasculature | 4.42e-07 | 2 |
muscle precursor cell | 5.83e-07 | 58 |
myoblast | 5.83e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.83e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
artery | 3.20e-17 | 42 |
arterial blood vessel | 3.20e-17 | 42 |
arterial system | 3.20e-17 | 42 |
systemic artery | 4.66e-17 | 33 |
systemic arterial system | 4.66e-17 | 33 |
artery wall | 4.24e-13 | 4 |
tunica adventitia of artery | 4.24e-13 | 4 |
adventitia | 4.24e-13 | 4 |
tunica adventitia of blood vessel | 4.24e-13 | 4 |
aorta tunica adventitia | 4.24e-13 | 4 |
aorta wall | 4.24e-13 | 4 |
splanchnic layer of lateral plate mesoderm | 5.97e-13 | 83 |
epithelial tube open at both ends | 5.10e-12 | 59 |
blood vessel | 5.10e-12 | 59 |
blood vasculature | 5.10e-12 | 59 |
vascular cord | 5.10e-12 | 59 |
vessel | 2.59e-10 | 68 |
cardiovascular system | 1.49e-09 | 109 |
aorta | 2.14e-09 | 21 |
aortic system | 2.14e-09 | 21 |
circulatory system | 2.92e-09 | 112 |
vasculature | 7.06e-09 | 78 |
vascular system | 7.06e-09 | 78 |
epithelial tube | 8.27e-09 | 117 |
blood vessel layer | 7.30e-08 | 7 |
perirenal fat | 3.28e-07 | 2 |
brachiocephalic artery | 4.42e-07 | 2 |
brachiocephalic vasculature | 4.42e-07 | 2 |