FFCP PHASE1:Hg19::chr4:10023130..10023156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56606 | |EntrezGene=56606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13446 | |HGNC=13446 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRM0 | |UniProt=Q9NRM0 | ||
|association_with_transcript=-16bp_to_NM_020041,uc003gmc.2_5end | |association_with_transcript=-16bp_to_NM_020041,uc003gmc.2_5end | ||
|cluster_id=chr4:10023130..10023156,- | |||
|coexpression_cluster_id=C4354 | |coexpression_cluster_id=C4354 | ||
|description=CAGE_peak_2_at_SLC2A9_5end | |description=CAGE_peak_2_at_SLC2A9_5end | ||
|id=chr4:10023130..10023156,- | |id=chr4:10023130..10023156,- | ||
|ontology_enrichment_celltype=CL:0002194!1.33e-21!63;CL:0000576!1.33e-21!63;CL:0000040!1.33e-21!63;CL:0000559!1.33e-21!63;CL:0002009!4.70e-21!65;CL:0000557!3.20e-18!71;CL:0000839!1.18e-16!70;CL:0000766!8.46e-16!76;CL:0002057!1.04e-15!42;CL:0000763!3.12e-13!112;CL:0000049!3.12e-13!112;CL:0000860!3.19e-13!45;CL:0002076!7.44e-07!43 | |ontology_enrichment_celltype=CL:0002194!1.33e-21!63;CL:0000576!1.33e-21!63;CL:0000040!1.33e-21!63;CL:0000559!1.33e-21!63;CL:0002009!4.70e-21!65;CL:0000557!3.20e-18!71;CL:0000839!1.18e-16!70;CL:0000766!8.46e-16!76;CL:0002057!1.04e-15!42;CL:0000763!3.12e-13!112;CL:0000049!3.12e-13!112;CL:0000860!3.19e-13!45;CL:0002076!7.44e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000473;5.99e-17;39!CL:0000234;5.99e-17;39!CL:0000576;3.23e-15;48!CL:0000860;1.13e-14;33!CL:0002057;1.13e-14;33!CL:0000766;2.74e-10;69!CL:0002076;2.48e-07;42!CL:0000235;3.51e-07;6!CL:0000763;4.23e-07;100!CL:0002368;9.27e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.20e-30,59;CL:0000576,4.20e-30,59;CL:0000040,4.20e-30,59;CL:0000559,4.20e-30,59;CL:0002009,1.24e-29,61;CL:0000557,1.43e-26,67;CL:0000839,1.25e-24,66;CL:0000766,4.10e-24,72;CL:0000473,1.25e-23,48;CL:0000234,1.25e-23,48;CL:0000763,1.43e-19,108;CL:0000049,1.43e-19,108;CL:0000860,1.91e-18,42;CL:0002057,1.91e-18,42;CL:0002087,1.07e-09,115;CL:0002076,4.01e-09,42;CL:0000223,4.80e-09,58;CL:0000037,6.38e-09,168;CL:0000738,2.91e-08,136;CL:0000988,1.05e-07,177;CL:0002031,1.76e-07,120;CL:0002032,1.88e-07,161;CL:0000837,1.88e-07,161;CL:0000235,3.46e-07,6;CL:0002368,9.90e-07,13 | |||
|ontology_enrichment_development_v019=CL:0002057;7.94e-14;42!CL:0000049;7.33e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.84e-15!115;UBERON:0002193!1.49e-14!112;UBERON:0002371!1.93e-14!80;UBERON:0002390!9.50e-14!102;UBERON:0003061!9.50e-14!102;UBERON:0002204!1.12e-13!167;UBERON:0004765!4.54e-12!101;UBERON:0001434!4.54e-12!101;UBERON:0001474!4.77e-12!86;UBERON:0000467!1.07e-10!625;UBERON:0000480!1.70e-10!626;UBERON:0000468!1.16e-08!659;UBERON:0003081!9.15e-07!216 | |ontology_enrichment_uberon=UBERON:0002405!2.84e-15!115;UBERON:0002193!1.49e-14!112;UBERON:0002371!1.93e-14!80;UBERON:0002390!9.50e-14!102;UBERON:0003061!9.50e-14!102;UBERON:0002204!1.12e-13!167;UBERON:0004765!4.54e-12!101;UBERON:0001434!4.54e-12!101;UBERON:0001474!4.77e-12!86;UBERON:0000467!1.07e-10!625;UBERON:0000480!1.70e-10!626;UBERON:0000468!1.16e-08!659;UBERON:0003081!9.15e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.75e-07;31!UBERON:0002330;1.75e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.43e-22,76;UBERON:0002390,1.49e-21,98;UBERON:0003061,1.49e-21,98;UBERON:0002193,1.90e-21,108;UBERON:0002405,2.31e-20,93;UBERON:0004765,5.60e-19,90;UBERON:0001474,1.04e-18,82;UBERON:0001434,1.04e-16,100;UBERON:0002204,2.84e-12,167;UBERON:0002365,8.15e-08,31;UBERON:0002330,8.15e-08,31;UBERON:0003081,7.71e-07,203 | |||
|phase1_expression=1.2717486548939,0.856402095563933,2.11431606143957,0,1.34088328328186,2.61701557230111,0,0.631719873426831,0,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,1.20538905604795,0,0.975865597581014,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,3.14691421479123,1.91914699048606,6.03782880932696,9.19421224478927,5.4217065380085,16.6389304575054,0,0,2.64240395401362,8.30993112797816,7.2196001089251,5.859293509328,24.4067866921518,15.223002302892,23.1818010870768,3.05336301437086,3.40088349319928,2.42584061187816,3.0215774797739,1.23350366406548,0.929119112685311,6.61692502340946,8.96562472851852,4.25668013799453,4.13694816883942,3.87290810150296,2.70852973188684,3.20011977222428,1.36453075028923,3.14612878223118,1.22433556948361,3.53021929783703,3.83602275479425,9.23583640522805,4.9865914405408,7.6720455095885,3.48251086354301,1.70215567407342,1.86846674698672,2.76373531782418,5.21482918420201,5.2125322729228,1.21079900526674,2.94622108790052,3.16462387440884,4.64761629886272,3.61427309940574,2.72556239160889,16.3999801473883,9.16079046333189,9.32208402843065,1.14005097496499,0.99458338599545,0.365328307529268,0,0,0,1.70692089026603,0,0,0,0.954053754535364,0,0,0,0,2.24203425192614,0.790152254325231,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.383959833463255,1.24930726552346,0.473554504088034,0,0,0,0,0,6.03630773733273,2.04580098949649,0.722878304769133,1.00267582127178,2.75208386025565,0,0,0,0,0,3.27447688744282,0.728590576585084,0.741568885568859,9.7364218096405,12.7114708228465,12.7639642098111,2.38490624305342,4.0039643754609,2.60020250930695,0.993812036833525,0,0.347140501607594,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0.760272105718513,0.24406205754817,0.735326160691737,1.62028389576352,0.446498641420399,0.898117490504679,0.337834441449967,0,0,0.549605231791222,0,0,9.59406914713576,0.993943903390637,0,1.45650098894541,0.573673241497627,0.709336764396714,1.68203280042692,0,0.24666754841716,0.622422070799533,0.538842688278752,0.653847612453835,3.17850598054356,2.30470369792,0,0,0,0,0,0,0,0.204154171254893,0,0.826606249406124,2.37600571456411,0.989067717114227,0.910161361938026,2.15585442544872,0.168336113954066,0,0.554128230968366,0.438977620880838,0.612975591598039,1.20190447125277,0.226864366320042,0.179389635688862,2.34913127700424,2.54318281391474,0.900273288253207,1.54578793857658,0.772921620136887,2.04728541964749,0.337552664482532,0.487185025805993,2.01947019395292,3.58994604704967,0.646584227275248,1.42003837006646,0.503760491138201,0.847802961552438,13.9147814277574,11.1825909442242,14.0534251740612,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,2.4694440679884,0,10.1404027857465,5.89696330006576,4.72631925345123,0,0.491953754172454,2.23038153388083,23.5963113628545,15.7362454560667,8.34390471016536,13.1475592125112,0.325808305310325,0,0,0,0.352226082707465,1.29929802984966,1.38895653772983,1.52203321787679,0,0,24.8679176148271,13.5722473780758,21.8487808564431,13.1227367581488,12.7666417431133,10.0660319042094,12.985985791913,12.2066254175864,17.6356032415997,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.448524337381443,1.30788020649984,0.2933531432838,0.387815147273333,0,0,0.26593811658487,0,0,0,0,1.85871391755592,0.542621605391443,0.823240336780769,0.65147236858747,1.42156779497018,0,0.602878754119172,0,0.99972991182057,17.0273292897667,15.0677127429638,16.8667151586425,0,0,0,3.18518874668674,6.1642896765115,4.29746311775749,0,1.18218456121156,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,1.10422342547226,0,0,0.623912584592421,0.713715955188647,1.26161932027148,1.99140405487612,1.80567659836631,2.27407504055985,0,0,0,0.173767228936166,0.587403472388222,0,4.13536052245775,4.52999821719095,3.20182673410333,0,0,0,0.992431231275107,0.460385919864187,0,1.15325234330131,3.07024349440022,0.482561763430822,4.45254199334973,0.154209693802656,0.177561725313127,0,0,0,0.725156697549733,19.0481146788121,9.76058482720501,0.574072240823034,0.546273504020151,2.09799063935079,0,1.15523005656622,1.56869953835371,0,1.26661954671451,1.13733384070897,0.340187410553031,0,1.54227252690289,0.270946437543853,1.00337954770971,2.80363900349542,0,0.895499018888713,0,0,0,0,0,7.00678879204511,0,0.082509499920588,13.7823729119081,7.15066270640173,0,0.193341436584244,0.770243085573222,0.614014698904518,0,2.0409846524972,1.88521702088497,0.596586391912706,0.178064071293475,16.1979217053759,12.1079742440017,25.6501552114114,12.5435648260882,0,0.94443704049192,1.3940745403212,0.616067160352178,0.532306030317022,0.869932992075073,2.03856641014312,0.715624433709956,2.60510858551767,1.2655176988749,5.71890581771475,0.511795582622668,0,0,0.78494864019923,1.2591072030832,0.54907405947211,0.706874414074119,0.404364963146632,0,0.421258456238981,0.48763373908959,1.70599442741899,2.11300293513511,0.545999645631943,1.27264888758341,2.26016233240486,0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| ||
|short_description=p2@SLC2A9 | |short_description=p2@SLC2A9 | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p2@SLC2A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC2A9_5end |
Coexpression cluster: | C4354_Small_Prostate_Mallassezderived_Urothelial_Sebocyte_Keratinocyte_Macrophage |
Association with transcript: | -16bp_to_NM_020041, uc003gmc.2_5end |
EntrezGene: | SLC2A9 |
HGNC: | 13446 |
UniProt: | Q9NRM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.20e-30 | 59 |
monocyte | 4.20e-30 | 59 |
monoblast | 4.20e-30 | 59 |
promonocyte | 4.20e-30 | 59 |
macrophage dendritic cell progenitor | 1.24e-29 | 61 |
granulocyte monocyte progenitor cell | 1.43e-26 | 67 |
myeloid lineage restricted progenitor cell | 1.25e-24 | 66 |
myeloid leukocyte | 4.10e-24 | 72 |
defensive cell | 1.25e-23 | 48 |
phagocyte | 1.25e-23 | 48 |
myeloid cell | 1.43e-19 | 108 |
common myeloid progenitor | 1.43e-19 | 108 |
classical monocyte | 1.91e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-18 | 42 |
nongranular leukocyte | 1.07e-09 | 115 |
endo-epithelial cell | 4.01e-09 | 42 |
endodermal cell | 4.80e-09 | 58 |
hematopoietic stem cell | 6.38e-09 | 168 |
leukocyte | 2.91e-08 | 136 |
hematopoietic cell | 1.05e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 1.76e-07 | 120 |
hematopoietic oligopotent progenitor cell | 1.88e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-07 | 161 |
macrophage | 3.46e-07 | 6 |
respiratory epithelial cell | 9.90e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.43e-22 | 76 |
hematopoietic system | 1.49e-21 | 98 |
blood island | 1.49e-21 | 98 |
hemolymphoid system | 1.90e-21 | 108 |
immune system | 2.31e-20 | 93 |
skeletal element | 5.60e-19 | 90 |
bone element | 1.04e-18 | 82 |
skeletal system | 1.04e-16 | 100 |
musculoskeletal system | 2.84e-12 | 167 |
exocrine gland | 8.15e-08 | 31 |
exocrine system | 8.15e-08 | 31 |
lateral plate mesoderm | 7.71e-07 | 203 |