FFCP PHASE1:Hg19::chr3:8792964..8793003,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:8792964..8793003,- | |||
|coexpression_cluster_id=C2758 | |coexpression_cluster_id=C2758 | ||
|description=CAGE_peak_at_chr3:8792964..8793003,- | |description=CAGE_peak_at_chr3:8792964..8793003,- | ||
|id=chr3:8792964..8793003,- | |id=chr3:8792964..8793003,- | ||
|ontology_enrichment_celltype=CL:0002620!1.75e-13!23;CL:0000057!2.79e-13!75;CL:0000077!4.93e-08!19 | |ontology_enrichment_celltype=CL:0002620!1.75e-13!23;CL:0000057!2.79e-13!75;CL:0000077!4.93e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.44e-19;6!CL:0000098;1.44e-19;6!CL:0002167;1.44e-19;6!CL:0000077;6.01e-13;19!CL:0002579;3.58e-10;3!CL:0000511;1.31e-08;1!CL:0002625;1.31e-08;1!CL:0000216;1.31e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.54e-19,6;CL:0000098,1.54e-19,6;CL:0002167,1.54e-19,6;CL:0000077,4.97e-13,19;CL:0002579,3.75e-10,3;CL:0000511,1.31e-08,1;CL:0002625,1.31e-08,1;CL:0000216,1.31e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.20e-09!5;DOID:450!8.20e-09!5;DOID:66!8.20e-09!5;DOID:423!8.20e-09!5;DOID:0080000!8.20e-09!5;DOID:11722!8.20e-09!5;DOID:2394!3.43e-08!14;DOID:193!3.85e-08!29;DOID:120!1.31e-07!27 | |ontology_enrichment_disease=DOID:17!8.20e-09!5;DOID:450!8.20e-09!5;DOID:66!8.20e-09!5;DOID:423!8.20e-09!5;DOID:0080000!8.20e-09!5;DOID:11722!8.20e-09!5;DOID:2394!3.43e-08!14;DOID:193!3.85e-08!29;DOID:120!1.31e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:3112;1.95e-08;1!DOID:2513;1.95e-08;1!DOID:3369;4.56e-08;1!DOID:4235;4.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.88e-08,1;DOID:3112,2.02e-08,1;DOID:4235,2.89e-08,1;DOID:3369,4.11e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!4.74e-11!6;UBERON:0002358!4.74e-11!6;UBERON:0003684!4.74e-11!6;UBERON:0001178!4.74e-11!6;UBERON:0002097!1.94e-08!40;UBERON:0002199!5.11e-07!45;UBERON:0002416!5.11e-07!45 | |ontology_enrichment_uberon=UBERON:0003688!4.74e-11!6;UBERON:0002358!4.74e-11!6;UBERON:0003684!4.74e-11!6;UBERON:0001178!4.74e-11!6;UBERON:0002097!1.94e-08!40;UBERON:0002199!5.11e-07!45;UBERON:0002416!5.11e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.00e-11;6!UBERON:0002358;5.00e-11;6!UBERON:0003684;5.00e-11;6!UBERON:0001178;5.00e-11;6!UBERON:0001136;1.31e-08;1!UBERON:0001343;1.31e-08;1!UBERON:0004910;1.31e-08;1!UBERON:0004813;1.31e-08;1!UBERON:0004457;1.66e-07;9!UBERON:0000042;1.66e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.04e-11,6;UBERON:0002358,6.04e-11,6;UBERON:0003684,6.04e-11,6;UBERON:0001178,6.04e-11,6;UBERON:0001136,1.31e-08,1;UBERON:0001343,1.31e-08,1;UBERON:0004910,1.31e-08,1;UBERON:0005154,1.31e-08,1;UBERON:0005295,1.31e-08,1;UBERON:0004813,1.31e-08,1;UBERON:0005297,1.31e-08,1;UBERON:0005294,1.31e-08,1;UBERON:0010141,1.31e-08,1;UBERON:0005891,1.31e-08,1;UBERON:0004871,3.05e-08,8 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.226864366320042,2.15267562826634,0.213557388818567,0.847727604638247,1.80054657650641,0.103052529238439,0.515281080091258,0.37223371266318,1.85653965465393,0,0.504867548488229,0.276149695926898,0.161646056818812,1.06502877754984,0.503760491138201,0.67824236924195,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32969058292435,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23912584592421,9.8135943838439,6.78120384645919,2.22568688486155,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,1.07423381301644,0.841980283299221,0.384417447767103,1.53512174720011,2.0911009748669,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.123084805461069,2.48831670129446,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.520679215005393,0,0.0870592065804026,0,0.343972064943233,0,0,0.164230914106418,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0.14405479798815,0,0,0.407712618220842,0.523014231561666,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0,0.363697318405119,0,0.464033759878494,1.59238355479446,1.20008329398946,0,0,0,0,0,0.260994291965212,2.493765180635,2.54674721756217,0.734210113519403,11.1035081470522,0,0,2.8270263351341,1.3503982678964,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29280684514135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0,0,0,0.371995018166751,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0.853818767021724,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.226864366320042,2.15267562826634,0.213557388818567,0.847727604638247,1.80054657650641,0.103052529238439,0.515281080091258,0.37223371266318,1.85653965465393,0,0.504867548488229,0.276149695926898,0.161646056818812,1.06502877754984,0.503760491138201,0.67824236924195,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32969058292435,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23912584592421,9.8135943838439,6.78120384645919,2.22568688486155,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,1.07423381301644,0.841980283299221,0.384417447767103,1.53512174720011,2.0911009748669,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.123084805461069,2.48831670129446,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.520679215005393,0,0.0870592065804026,0,0.343972064943233,0,0,0.164230914106418,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0.14405479798815,0,0,0.407712618220842,0.523014231561666,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0,0.363697318405119,0,0.464033759878494,1.59238355479446,1.20008329398946,0,0,0,0,0,0.260994291965212,2.493765180635,2.54674721756217,0.734210113519403,11.1035081470522,0,0,2.8270263351341,1.3503982678964,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29280684514135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0,0,0,0.371995018166751,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0.853818767021724,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr3:8792964..8793003,- | |short_description=p@chr3:8792964..8793003,- | ||
}} | }} |
Latest revision as of 23:49, 29 July 2015
Short description: | p@chr3:8792964..8793003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:8792964..8793003, - |
Coexpression cluster: | C2758_Olfactory_mesothelioma_Fibroblast_Preadipocyte_basal_Hair_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.54e-19 | 6 |
sensory epithelial cell | 1.54e-19 | 6 |
olfactory epithelial cell | 1.54e-19 | 6 |
mesothelial cell | 4.97e-13 | 19 |
omentum preadipocyte | 3.75e-10 | 3 |
androgen binding protein secreting cell | 1.31e-08 | 1 |
seminiferous tubule epithelial cell | 1.31e-08 | 1 |
Sertoli cell | 1.31e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.04e-11 | 6 |
peritoneum | 6.04e-11 | 6 |
abdominal cavity | 6.04e-11 | 6 |
visceral peritoneum | 6.04e-11 | 6 |
mesothelium | 1.31e-08 | 1 |
seminiferous tubule of testis | 1.31e-08 | 1 |
epithelium of male gonad | 1.31e-08 | 1 |
epithelial cord | 1.31e-08 | 1 |
sex cord | 1.31e-08 | 1 |
seminiferous tubule epithelium | 1.31e-08 | 1 |
testis sex cord | 1.31e-08 | 1 |
genital ridge | 1.31e-08 | 1 |
primitive sex cord of indifferent gonad | 1.31e-08 | 1 |
coelomic epithelium | 1.31e-08 | 1 |
somatic layer of lateral plate mesoderm | 3.05e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.88e-08 | 1 |
papillary adenocarcinoma | 2.02e-08 | 1 |
spindle cell sarcoma | 2.89e-08 | 1 |
peripheral primitive neuroectodermal tumor | 4.11e-08 | 1 |