FFCP PHASE1:Hg19::chr3:52002412..52002433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57060 | |EntrezGene=57060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8652 | |HGNC=8652 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZY3,C9J5V4 | |UniProt=C9JZY3,C9J5V4 | ||
|association_with_transcript=0bp_to_ENST00000468324,ENST00000484633,ENST00000497653_5end | |association_with_transcript=0bp_to_ENST00000468324,ENST00000484633,ENST00000497653_5end | ||
|cluster_id=chr3:52002412..52002433,- | |||
|coexpression_cluster_id=C4216 | |coexpression_cluster_id=C4216 | ||
|description=CAGE_peak_7_at_PCBP4_5end | |description=CAGE_peak_7_at_PCBP4_5end | ||
|id=chr3:52002412..52002433,- | |id=chr3:52002412..52002433,- | ||
|ontology_enrichment_celltype=CL:0002322!5.93e-10!5;CL:0002319!1.03e-09!25;CL:0000133!1.04e-08!59;CL:0000128!1.47e-07!7;CL:0000126!1.47e-07!7;CL:0000127!1.47e-07!7;CL:0002453!1.47e-07!7;CL:0000095!1.73e-07!17;CL:0000123!1.73e-07!17;CL:0000333!1.82e-07!41;CL:0000243!5.56e-07!15;CL:0000125!5.56e-07!15;CL:0000030!5.56e-07!15;CL:0000339!5.56e-07!15 | |ontology_enrichment_celltype=CL:0002322!5.93e-10!5;CL:0002319!1.03e-09!25;CL:0000133!1.04e-08!59;CL:0000128!1.47e-07!7;CL:0000126!1.47e-07!7;CL:0000127!1.47e-07!7;CL:0002453!1.47e-07!7;CL:0000095!1.73e-07!17;CL:0000123!1.73e-07!17;CL:0000333!1.82e-07!41;CL:0000243!5.56e-07!15;CL:0000125!5.56e-07!15;CL:0000030!5.56e-07!15;CL:0000339!5.56e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.87e-44;5!CL:0002321;1.82e-28;15!CL:0000540;1.06e-13;6!CL:0000404;1.06e-13;6!CL:0000669;1.66e-09;4!CL:0000148;1.42e-08;10!CL:0000333;3.80e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.87e-44,5;CL:0000540,1.08e-13,6;CL:0000031,1.08e-13,6;CL:0000404,1.08e-13,6;CL:0000047,2.10e-10,8;CL:0000669,1.89e-09,4;CL:0000148,1.44e-08,10;CL:0000541,1.44e-08,10;CL:0000133,2.97e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.06e-13;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;7.22e-10;22!DOID:2994;7.22e-10;22!DOID:169;6.36e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.09e-10,22;DOID:2994,7.09e-10,22;DOID:169,6.27e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.13e-11!94;UBERON:0001016!1.13e-11!94;UBERON:0005743!4.52e-10!86;UBERON:0003075!5.17e-09!86;UBERON:0007284!5.17e-09!86;UBERON:0002346!6.01e-09!90;UBERON:0003056!1.21e-08!61;UBERON:0000924!1.31e-08!173;UBERON:0006601!1.31e-08!173;UBERON:0004121!1.46e-08!169;UBERON:0001456!4.73e-08!21;UBERON:0007625!9.00e-08!11;UBERON:0001017!9.31e-08!82;UBERON:0000966!1.14e-07!5;UBERON:0005388!1.14e-07!5;UBERON:0001802!1.14e-07!5;UBERON:0000033!1.14e-07!123;UBERON:0000019!1.31e-07!19;UBERON:0000047!1.31e-07!19;UBERON:0004088!1.31e-07!19;UBERON:0003072!1.31e-07!19;UBERON:0003071!1.31e-07!19;UBERON:0004128!1.31e-07!19;UBERON:0000153!1.84e-07!129;UBERON:0007811!1.84e-07!129;UBERON:0000970!4.23e-07!20;UBERON:0000020!4.27e-07!23 | |ontology_enrichment_uberon=UBERON:0000073!1.13e-11!94;UBERON:0001016!1.13e-11!94;UBERON:0005743!4.52e-10!86;UBERON:0003075!5.17e-09!86;UBERON:0007284!5.17e-09!86;UBERON:0002346!6.01e-09!90;UBERON:0003056!1.21e-08!61;UBERON:0000924!1.31e-08!173;UBERON:0006601!1.31e-08!173;UBERON:0004121!1.46e-08!169;UBERON:0001456!4.73e-08!21;UBERON:0007625!9.00e-08!11;UBERON:0001017!9.31e-08!82;UBERON:0000966!1.14e-07!5;UBERON:0005388!1.14e-07!5;UBERON:0001802!1.14e-07!5;UBERON:0000033!1.14e-07!123;UBERON:0000019!1.31e-07!19;UBERON:0000047!1.31e-07!19;UBERON:0004088!1.31e-07!19;UBERON:0003072!1.31e-07!19;UBERON:0003071!1.31e-07!19;UBERON:0004128!1.31e-07!19;UBERON:0000153!1.84e-07!129;UBERON:0007811!1.84e-07!129;UBERON:0000970!4.23e-07!20;UBERON:0000020!4.27e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.80e-08;5!UBERON:0002410;3.80e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.74e-08,5;UBERON:0002410,3.74e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,4.51302712679503,5.4337205011809,5.34492137199785,2.90250954043037,4.03713361401005,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,2.65890789101569,0,0,0,0,0,0,0.0770153371044148,1.56869953835371,0,0,0,0,0,0,0.270946437543853,1.50506932156456,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0.580024309752732,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.222617410045812,0,1.47787785689595,0,0,0.503865495708552,0.409074730008619,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0.868124974666461,0,0.120596438625408,0,0.331737779793674,0.591095237907095,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0.114536596165916,1.20116498503375,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,0.315132729228895,0.576911008668165,0.337017719270924,0.0984274815147488,0.169346664131569,0,0,2.89355667237035,2.61324929534744,3.32352270423348,0,0,0.0607495566580247,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.553394539744923,0,0.151649117541648,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,4.47630299562781,0.323474434190045,0,5.67890118598472,0,0,0.123935764259002,0,0,0.70975570501128,0,0.352675943690684,0,0,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0.47404083519818,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.872701380680755,0,0,0,0,1.64016352285603,0.764859003745869,3.67425652933167,0.815910637935854,2.13773924212448,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,4.51302712679503,5.4337205011809,5.34492137199785,2.90250954043037,4.03713361401005,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,2.65890789101569,0,0,0,0,0,0,0.0770153371044148,1.56869953835371,0,0,0,0,0,0,0.270946437543853,1.50506932156456,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0.580024309752732,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.222617410045812,0,1.47787785689595,0,0,0.503865495708552,0.409074730008619,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0.868124974666461,0,0.120596438625408,0,0.331737779793674,0.591095237907095,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0.114536596165916,1.20116498503375,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,0.315132729228895,0.576911008668165,0.337017719270924,0.0984274815147488,0.169346664131569,0,0,2.89355667237035,2.61324929534744,3.32352270423348,0,0,0.0607495566580247,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.553394539744923,0,0.151649117541648,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,4.47630299562781,0.323474434190045,0,5.67890118598472,0,0,0.123935764259002,0,0,0.70975570501128,0,0.352675943690684,0,0,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0.47404083519818,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.872701380680755,0,0,0,0,1.64016352285603,0.764859003745869,3.67425652933167,0.815910637935854,2.13773924212448,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@PCBP4 | |short_description=p7@PCBP4 | ||
}} | }} |
Latest revision as of 22:10, 18 September 2015
Short description: | p7@PCBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PCBP4_5end |
Coexpression cluster: | C4216_H9_hepatoblastoma_neuroblastoma_testicular_teratocarcinoma_iPS_HES3GFP |
Association with transcript: | 0bp_to_ENST00000468324, ENST00000484633, ENST00000497653_5end |
EntrezGene: | PCBP4 |
HGNC: | 8652 |
UniProt: | C9JZY3C9J5V4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.87e-44 | 5 |
neuron | 1.08e-13 | 6 |
neuroblast | 1.08e-13 | 6 |
electrically signaling cell | 1.08e-13 | 6 |
neuronal stem cell | 2.10e-10 | 8 |
pericyte cell | 1.89e-09 | 4 |
melanocyte | 1.44e-08 | 10 |
melanoblast | 1.44e-08 | 10 |
neurectodermal cell | 2.97e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.74e-08 | 5 |
autonomic nervous system | 3.74e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.09e-10 | 22 |
germ cell cancer | 7.09e-10 | 22 |
neuroendocrine tumor | 6.27e-07 | 6 |