FFCP PHASE1:Hg19::chr3:197300199..197300219,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=622 | |EntrezGene=622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1027 | |HGNC=1027 | ||
|TSSclassifier=strong | |||
|UniProt=Q02338,C9JEB9 | |UniProt=Q02338,C9JEB9 | ||
|association_with_transcript=-5bp_to_ENST00000358186,ENST00000431056,NM_203315,uc003fxu.2_5end | |association_with_transcript=-5bp_to_ENST00000358186,ENST00000431056,NM_203315,uc003fxu.2_5end | ||
|cluster_id=chr3:197300199..197300219,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_BDH1_5end | |description=CAGE_peak_2_at_BDH1_5end | ||
|id=chr3:197300199..197300219,- | |id=chr3:197300199..197300219,- | ||
|ontology_enrichment_celltype=CL:0000181!6.09e-37!12;CL:0000417!6.09e-37!12;CL:0000668!6.09e-37!12;CL:0000414!6.09e-37!12;CL:0000412!6.09e-37!12;CL:0000182!6.09e-37!12;CL:0000223!2.42e-08!59 | |ontology_enrichment_celltype=CL:0000181!6.09e-37!12;CL:0000417!6.09e-37!12;CL:0000668!6.09e-37!12;CL:0000414!6.09e-37!12;CL:0000412!6.09e-37!12;CL:0000182!6.09e-37!12;CL:0000223!2.42e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.07e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.07e-66,12;CL:0000223,1.31e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.41e-53;11!UBERON:0009497;4.99e-45;13!UBERON:0001041;1.64e-19;30!UBERON:0003104;6.17e-19;31!CL:0000223;2.93e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.21e-07,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.08e-69;19!UBERON:0006925;2.08e-69;19!UBERON:0002423;1.15e-52;25!UBERON:0002365;4.35e-41;31!UBERON:0002330;4.35e-41;31!UBERON:0002368;5.03e-36;33!UBERON:0000949;8.88e-26;43!UBERON:0005172;1.02e-15;52!UBERON:0005173;1.02e-15;52!UBERON:0002417;1.50e-14;58!UBERON:0000916;1.50e-14;58!UBERON:0002530;8.21e-13;57!UBERON:0001007;1.42e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.08e-69,19;UBERON:0006925,2.08e-69,19;UBERON:0008836,2.08e-69,19;UBERON:0008835,6.74e-60,22;UBERON:0003894,6.74e-60,22;UBERON:0009854,2.81e-57,23;UBERON:0007499,1.15e-52,25;UBERON:0009497,1.15e-52,25;UBERON:0000015,1.15e-52,25;UBERON:0002423,1.15e-52,25;UBERON:0006235,1.15e-52,25;UBERON:0004161,1.15e-52,25;UBERON:0009856,1.26e-50,26;UBERON:0002365,2.15e-42,31;UBERON:0002330,2.15e-42,31;UBERON:0002368,1.69e-37,35;UBERON:0000949,4.67e-29,45;UBERON:0003929,3.99e-24,54;UBERON:0005172,3.99e-24,54;UBERON:0005173,3.99e-24,54;UBERON:0002530,4.94e-22,59;UBERON:0002417,1.18e-21,60;UBERON:0000916,1.18e-21,60;UBERON:0005911,1.11e-15,82;UBERON:0001041,9.69e-15,87;UBERON:0005177,1.33e-12,101;UBERON:0009569,2.71e-11,112;UBERON:0003914,8.86e-11,117;UBERON:0004921,1.38e-10,118;UBERON:0005256,2.63e-10,122;UBERON:0001007,1.75e-08,145;UBERON:0001555,1.75e-08,145;UBERON:0007026,1.75e-08,145;UBERON:0000490,2.33e-08,148;UBERON:0001048,1.14e-07,160;UBERON:0003104,1.14e-07,160;UBERON:0009142,1.14e-07,160;UBERON:0004119,1.28e-07,160;UBERON:0000925,1.28e-07,160;UBERON:0006595,1.28e-07,160 | |||
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|short_description=p2@BDH1 | |short_description=p2@BDH1 | ||
}} | }} |
Latest revision as of 17:12, 17 September 2015
Short description: | p2@BDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BDH1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -5bp_to_ENST00000358186, ENST00000431056, NM_203315, uc003fxu.2_5end |
EntrezGene: | BDH1 |
HGNC: | 1027 |
UniProt: | Q02338C9JEB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.07e-66 | 12 |
endodermal cell | 1.31e-13 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.21e-07 | 39 |