FFCP PHASE1:Hg19::chr3:190109013..190109017,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:190109013..190109017,+ | |||
|coexpression_cluster_id=C601 | |coexpression_cluster_id=C601 | ||
|description=CAGE_peak_at_chr3:190109013..190109017,+ | |description=CAGE_peak_at_chr3:190109013..190109017,+ | ||
|id=chr3:190109013..190109017,+ | |id=chr3:190109013..190109017,+ | ||
|ontology_enrichment_celltype=CL:0000080!2.07e-09!6 | |ontology_enrichment_celltype=CL:0000080!2.07e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.96e-14;3!CL:0002149;5.54e-08;6!CL:0002255;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.83e-14,3;CL:0002149,5.54e-08,6;CL:0002255,5.54e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.97e-09;5 | |||
|ontology_enrichment_disease=DOID:4468!1.49e-12!2;DOID:4556!2.01e-08!3;DOID:299!9.04e-08!25;DOID:305!1.89e-07!106;DOID:0060085!5.37e-07!1;DOID:3165!5.37e-07!1;DOID:0060121!5.37e-07!1;DOID:2438!5.37e-07!1;DOID:4418!5.37e-07!1 | |ontology_enrichment_disease=DOID:4468!1.49e-12!2;DOID:4556!2.01e-08!3;DOID:299!9.04e-08!25;DOID:305!1.89e-07!106;DOID:0060085!5.37e-07!1;DOID:3165!5.37e-07!1;DOID:0060121!5.37e-07!1;DOID:2438!5.37e-07!1;DOID:4418!5.37e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4468;3.81e-21;2!DOID:3001;5.54e-08;6!DOID:299;2.13e-07;25!DOID:120;6.43e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.81e-21,2;DOID:3001,5.54e-08,6;DOID:299,2.14e-07,25;DOID:120,6.43e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002372!9.51e-07!1;UBERON:0001961!9.51e-07!1;UBERON:0001744!9.51e-07!1;UBERON:0001735!9.51e-07!1 | |ontology_enrichment_uberon=UBERON:0002372!9.51e-07!1;UBERON:0001961!9.51e-07!1;UBERON:0001744!9.51e-07!1;UBERON:0001735!9.51e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.97e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.97e-09,5;UBERON:0004117,2.97e-09,5;UBERON:0007689,2.97e-09,5;UBERON:0007123,2.97e-09,5;UBERON:0003091,2.97e-09,5 | |||
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|short_description=p@chr3:190109013..190109017,+ | |short_description=p@chr3:190109013..190109017,+ | ||
}} | }} |
Latest revision as of 19:26, 29 July 2015
Short description: | p@chr3:190109013..190109017, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:190109013..190109017, + |
Coexpression cluster: | C601_endometrial_clear_thyroid_kidney_Renal_serous_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.83e-14 | 3 |
epithelial cell of uterus | 5.54e-08 | 6 |
stromal cell of endometrium | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.97e-09 | 5 |
pharyngeal pouch | 2.97e-09 | 5 |
thyroid diverticulum | 2.97e-09 | 5 |
pharyngeal pouch 2 | 2.97e-09 | 5 |
thyroid primordium | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.81e-21 | 2 |
female reproductive endometrioid cancer | 5.54e-08 | 6 |
adenocarcinoma | 2.14e-07 | 25 |
female reproductive organ cancer | 6.43e-07 | 27 |