FFCP PHASE1:Hg19::chr3:148601437..148601447,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:148601437..148601447,- | |||
|coexpression_cluster_id=C3817 | |coexpression_cluster_id=C3817 | ||
|description=CAGE_peak_at_chr3:148601437..148601447,- | |description=CAGE_peak_at_chr3:148601437..148601447,- | ||
|id=chr3:148601437..148601447,- | |id=chr3:148601437..148601447,- | ||
|ontology_enrichment_celltype=CL:0002274!1.27e-70!5;CL:0000457!1.27e-70!5;CL:0002191!1.27e-70!5;CL:0000097!1.27e-70!5;CL:0000831!1.27e-70!5;CL:0002028!1.27e-70!5;CL:0000163!1.47e-39!9;CL:0001024!5.13e-23!1;CL:0000764!3.62e-12!2;CL:0000765!3.62e-12!2;CL:0000050!3.62e-12!2;CL:0000038!3.62e-12!2;CL:0000558!3.62e-12!2;CL:0000547!3.62e-12!2;CL:0000549!3.62e-12!2;CL:0000550!3.62e-12!2;CL:0000552!3.62e-12!2;CL:0000151!1.54e-10!35;CL:0000839!6.13e-08!70;CL:0000763!5.06e-07!112;CL:0000049!5.06e-07!112 | |ontology_enrichment_celltype=CL:0002274!1.27e-70!5;CL:0000457!1.27e-70!5;CL:0002191!1.27e-70!5;CL:0000097!1.27e-70!5;CL:0000831!1.27e-70!5;CL:0002028!1.27e-70!5;CL:0000163!1.47e-39!9;CL:0001024!5.13e-23!1;CL:0000764!3.62e-12!2;CL:0000765!3.62e-12!2;CL:0000050!3.62e-12!2;CL:0000038!3.62e-12!2;CL:0000558!3.62e-12!2;CL:0000547!3.62e-12!2;CL:0000549!3.62e-12!2;CL:0000550!3.62e-12!2;CL:0000552!3.62e-12!2;CL:0000151!1.54e-10!35;CL:0000839!6.13e-08!70;CL:0000763!5.06e-07!112;CL:0000049!5.06e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.21e-88;5!CL:0000163;7.82e-50;9!CL:0000151;2.66e-13;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.21e-88,5;CL:0002028,1.21e-88,5;CL:0000163,7.82e-50,9;CL:0000151,2.90e-13,36;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0000839,1.56e-07,66;CL:0000557,1.96e-07,67;CL:0000766,5.59e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000029!3.28e-23!1;UBERON:0002193!1.96e-09!112;UBERON:0002390!1.05e-07!102;UBERON:0003061!1.05e-07!102;UBERON:0002371!5.65e-07!80;UBERON:0002405!8.01e-07!115 | |ontology_enrichment_uberon=UBERON:0000029!3.28e-23!1;UBERON:0002193!1.96e-09!112;UBERON:0002390!1.05e-07!102;UBERON:0003061!1.05e-07!102;UBERON:0002371!5.65e-07!80;UBERON:0002405!8.01e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr3:148601437..148601447,- | |short_description=p@chr3:148601437..148601447,- | ||
}} | }} |
Latest revision as of 16:49, 29 July 2015
Short description: | p@chr3:148601437..148601447, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:148601437..148601447, - |
Coexpression cluster: | C3817_Mast_acute_CD19_granulocyte_Whole_leukemia_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.21e-88 | 5 |
basophil mast progenitor cell | 1.21e-88 | 5 |
endocrine cell | 7.82e-50 | 9 |
secretory cell | 2.90e-13 | 36 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
myeloid lineage restricted progenitor cell | 1.56e-07 | 66 |
granulocyte monocyte progenitor cell | 1.96e-07 | 67 |
myeloid leukocyte | 5.59e-07 | 72 |