FFCP PHASE1:Hg19::chr3:145940126..145940135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57088 | |EntrezGene=57088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16497 | |HGNC=16497 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3P9 | |UniProt=C9J3P9 | ||
|association_with_transcript=22bp_to_ENST00000498625_5end | |association_with_transcript=22bp_to_ENST00000498625_5end | ||
|cluster_id=chr3:145940126..145940135,- | |||
|coexpression_cluster_id=C4290 | |coexpression_cluster_id=C4290 | ||
|description=CAGE_peak_15_at_PLSCR4_5end | |description=CAGE_peak_15_at_PLSCR4_5end | ||
|id=chr3:145940126..145940135,- | |id=chr3:145940126..145940135,- | ||
|ontology_enrichment_celltype=CL:0002139!3.39e-15!24;CL:0000071!1.28e-11!18;CL:0002546!1.28e-11!18;CL:0000115!2.63e-11!35;CL:0002078!2.34e-08!44;CL:1000413!3.67e-08!9 | |ontology_enrichment_celltype=CL:0002139!3.39e-15!24;CL:0000071!1.28e-11!18;CL:0002546!1.28e-11!18;CL:0000115!2.63e-11!35;CL:0002078!2.34e-08!44;CL:1000413!3.67e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002138;4.34e-23;6!CL:0000182;5.08e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.34e-23,6;CL:0002138,4.34e-23,6;CL:0005022,4.34e-23,6;CL:0000182,5.37e-12,12 | |||
|ontology_enrichment_development_v019=CL:0005022;4.34e-23;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-19!115;UBERON:0004111!5.54e-12!241;UBERON:0000477!7.51e-12!286;UBERON:0001986!1.28e-11!18;UBERON:0004638!1.28e-11!18;UBERON:0004852!1.28e-11!18;UBERON:0000025!9.93e-11!194;UBERON:0000487!3.61e-09!22;UBERON:0005057!1.24e-08!26;UBERON:0003914!1.76e-08!118;UBERON:0002107!2.62e-08!19;UBERON:0006925!2.62e-08!19;UBERON:0008836!2.62e-08!19;UBERON:0002771!2.65e-08!3;UBERON:0003915!3.67e-08!9;UBERON:0004700!3.67e-08!9;UBERON:0001917!3.67e-08!9;UBERON:0006914!7.50e-08!25;UBERON:0002049!2.38e-07!79;UBERON:0007798!2.38e-07!79;UBERON:0002368!2.44e-07!35;UBERON:0000483!2.52e-07!309;UBERON:0000119!3.72e-07!312;UBERON:0008835!5.56e-07!22;UBERON:0003894!5.56e-07!22;UBERON:0000055!6.97e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!3.25e-19!115;UBERON:0004111!5.54e-12!241;UBERON:0000477!7.51e-12!286;UBERON:0001986!1.28e-11!18;UBERON:0004638!1.28e-11!18;UBERON:0004852!1.28e-11!18;UBERON:0000025!9.93e-11!194;UBERON:0000487!3.61e-09!22;UBERON:0005057!1.24e-08!26;UBERON:0003914!1.76e-08!118;UBERON:0002107!2.62e-08!19;UBERON:0006925!2.62e-08!19;UBERON:0008836!2.62e-08!19;UBERON:0002771!2.65e-08!3;UBERON:0003915!3.67e-08!9;UBERON:0004700!3.67e-08!9;UBERON:0001917!3.67e-08!9;UBERON:0006914!7.50e-08!25;UBERON:0002049!2.38e-07!79;UBERON:0007798!2.38e-07!79;UBERON:0002368!2.44e-07!35;UBERON:0000483!2.52e-07!309;UBERON:0000119!3.72e-07!312;UBERON:0008835!5.56e-07!22;UBERON:0003894!5.56e-07!22;UBERON:0000055!6.97e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.33e-17;8!UBERON:0004536;1.33e-17;8!UBERON:0006558;1.33e-17;8!UBERON:0002107;2.39e-16;19!UBERON:0006925;2.39e-16;19!UBERON:0002465;2.66e-14;10!UBERON:0002423;1.28e-12;25!UBERON:0002368;1.21e-10;33!UBERON:0002365;4.08e-10;31!UBERON:0002330;4.08e-10;31!UBERON:0000949;7.77e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.33e-17,8;UBERON:0004536,1.33e-17,8;UBERON:0006558,1.33e-17,8;UBERON:0002107,2.52e-16,19;UBERON:0006925,2.52e-16,19;UBERON:0008836,2.52e-16,19;UBERON:0002465,2.66e-14,10;UBERON:0008835,3.27e-14,22;UBERON:0003894,3.27e-14,22;UBERON:0009854,1.25e-13,23;UBERON:0007499,1.33e-12,25;UBERON:0009497,1.33e-12,25;UBERON:0000015,1.33e-12,25;UBERON:0002423,1.33e-12,25;UBERON:0006235,1.33e-12,25;UBERON:0004161,1.33e-12,25;UBERON:0009856,3.79e-12,26;UBERON:0002365,2.60e-10,31;UBERON:0002330,2.60e-10,31;UBERON:0002368,3.24e-09,35;UBERON:0000949,2.55e-07,45 | |||
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| ||
|short_description=p15@PLSCR4 | |short_description=p15@PLSCR4 | ||
}} | }} |
Latest revision as of 06:38, 25 September 2015
Short description: | p15@PLSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PLSCR4_5end |
Coexpression cluster: | C4290_Lymphatic_Hepatocyte_liver_adipose_breast_Renal_vagina |
Association with transcript: | 22bp_to_ENST00000498625_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | C9J3P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.34e-23 | 6 |
endothelial cell of lymphatic vessel | 4.34e-23 | 6 |
vascular lymphangioblast | 4.34e-23 | 6 |
hepatocyte | 5.37e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.33e-17 | 8 |
lymph vasculature | 1.33e-17 | 8 |
lymphatic part of lymphoid system | 1.33e-17 | 8 |
liver | 2.52e-16 | 19 |
digestive gland | 2.52e-16 | 19 |
liver bud | 2.52e-16 | 19 |
lymphoid system | 2.66e-14 | 10 |
hepatic diverticulum | 3.27e-14 | 22 |
liver primordium | 3.27e-14 | 22 |
digestive tract diverticulum | 1.25e-13 | 23 |
epithelial sac | 1.33e-12 | 25 |
epithelium of foregut-midgut junction | 1.33e-12 | 25 |
anatomical boundary | 1.33e-12 | 25 |
hepatobiliary system | 1.33e-12 | 25 |
foregut-midgut junction | 1.33e-12 | 25 |
septum transversum | 1.33e-12 | 25 |
sac | 3.79e-12 | 26 |
exocrine gland | 2.60e-10 | 31 |
exocrine system | 2.60e-10 | 31 |
endocrine gland | 3.24e-09 | 35 |
endocrine system | 2.55e-07 | 45 |