FFCP PHASE1:Hg19::chr3:145824416..145824437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:145824416..145824437,- | |||
|coexpression_cluster_id=C1512 | |coexpression_cluster_id=C1512 | ||
|description=CAGE_peak_at_chr3:145824416..145824437,- | |description=CAGE_peak_at_chr3:145824416..145824437,- | ||
|id=chr3:145824416..145824437,- | |id=chr3:145824416..145824437,- | ||
|ontology_enrichment_celltype=CL:0000055!1.38e-19!180;CL:0000222!9.69e-14!119;CL:0000359!2.10e-13!32;CL:0000680!5.18e-13!57;CL:0000056!5.18e-13!57;CL:0000355!5.18e-13!57;CL:0000220!7.40e-12!246;CL:0000187!1.12e-11!54;CL:0002321!1.37e-11!248;CL:0000192!1.91e-11!42;CL:0000514!1.91e-11!42;CL:0000393!1.13e-10!60;CL:0000211!1.13e-10!60;CL:0000183!1.22e-10!59;CL:0000077!1.71e-08!19;CL:0000057!8.03e-08!75 | |ontology_enrichment_celltype=CL:0000055!1.38e-19!180;CL:0000222!9.69e-14!119;CL:0000359!2.10e-13!32;CL:0000680!5.18e-13!57;CL:0000056!5.18e-13!57;CL:0000355!5.18e-13!57;CL:0000220!7.40e-12!246;CL:0000187!1.12e-11!54;CL:0002321!1.37e-11!248;CL:0000192!1.91e-11!42;CL:0000514!1.91e-11!42;CL:0000393!1.13e-10!60;CL:0000211!1.13e-10!60;CL:0000183!1.22e-10!59;CL:0000077!1.71e-08!19;CL:0000057!8.03e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.77e-15;32!CL:0000192;2.26e-11;43!CL:0000077;7.12e-10;19!CL:0000134;1.53e-09;55!CL:0000723;3.93e-09;61!CL:0000048;1.31e-08;58!CL:0002539;1.87e-08;10!CL:0000187;1.34e-07;55!CL:0002595;9.63e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.69e-15,32;CL:0000680,4.32e-14,58;CL:0000056,4.32e-14,58;CL:0000355,4.32e-14,58;CL:0000192,5.68e-14,43;CL:0000514,5.68e-14,43;CL:0000222,1.31e-13,121;CL:0000187,3.37e-12,55;CL:0000077,2.01e-10,19;CL:0000393,5.15e-10,61;CL:0000211,5.15e-10,61;CL:0002539,2.63e-08,10;CL:0002321,5.70e-08,250;CL:0000048,7.11e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;2.26e-11;43!CL:0000355;1.64e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!3.80e-08!14 | |ontology_enrichment_disease=DOID:2394!3.80e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.16e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.29e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!7.55e-14!42;UBERON:0003509!7.55e-14!42;UBERON:0004572!7.55e-14!42;UBERON:0000490!7.19e-13!138;UBERON:0002049!4.84e-12!79;UBERON:0007798!4.84e-12!79;UBERON:0001134!1.40e-11!61;UBERON:0002036!1.40e-11!61;UBERON:0003082!1.40e-11!61;UBERON:0004573!1.69e-11!33;UBERON:0004571!1.69e-11!33;UBERON:0002385!2.23e-11!63;UBERON:0001015!2.23e-11!63;UBERON:0000383!2.23e-11!63;UBERON:0000055!2.90e-11!69;UBERON:0001981!2.96e-11!60;UBERON:0007500!2.96e-11!60;UBERON:0004537!2.96e-11!60;UBERON:0006965!2.96e-11!60;UBERON:0005256!3.00e-11!143;UBERON:0000914!4.40e-11!83;UBERON:0002329!4.40e-11!83;UBERON:0003077!4.40e-11!83;UBERON:0003059!4.40e-11!83;UBERON:0007282!4.40e-11!83;UBERON:0009618!4.40e-11!83;UBERON:0007285!4.40e-11!83;UBERON:0003914!2.36e-10!118;UBERON:0004872!1.02e-09!84;UBERON:0004290!1.24e-09!70;UBERON:0000486!5.84e-09!82;UBERON:0002100!1.04e-08!216;UBERON:0004535!1.85e-08!110;UBERON:0001009!7.43e-08!113;UBERON:0003104!3.63e-07!238;UBERON:0009142!3.63e-07!238;UBERON:0000477!3.81e-07!286;UBERON:0000475!5.72e-07!365;UBERON:0000481!8.17e-07!347 | |ontology_enrichment_uberon=UBERON:0001637!7.55e-14!42;UBERON:0003509!7.55e-14!42;UBERON:0004572!7.55e-14!42;UBERON:0000490!7.19e-13!138;UBERON:0002049!4.84e-12!79;UBERON:0007798!4.84e-12!79;UBERON:0001134!1.40e-11!61;UBERON:0002036!1.40e-11!61;UBERON:0003082!1.40e-11!61;UBERON:0004573!1.69e-11!33;UBERON:0004571!1.69e-11!33;UBERON:0002385!2.23e-11!63;UBERON:0001015!2.23e-11!63;UBERON:0000383!2.23e-11!63;UBERON:0000055!2.90e-11!69;UBERON:0001981!2.96e-11!60;UBERON:0007500!2.96e-11!60;UBERON:0004537!2.96e-11!60;UBERON:0006965!2.96e-11!60;UBERON:0005256!3.00e-11!143;UBERON:0000914!4.40e-11!83;UBERON:0002329!4.40e-11!83;UBERON:0003077!4.40e-11!83;UBERON:0003059!4.40e-11!83;UBERON:0007282!4.40e-11!83;UBERON:0009618!4.40e-11!83;UBERON:0007285!4.40e-11!83;UBERON:0003914!2.36e-10!118;UBERON:0004872!1.02e-09!84;UBERON:0004290!1.24e-09!70;UBERON:0000486!5.84e-09!82;UBERON:0002100!1.04e-08!216;UBERON:0004535!1.85e-08!110;UBERON:0001009!7.43e-08!113;UBERON:0003104!3.63e-07!238;UBERON:0009142!3.63e-07!238;UBERON:0000477!3.81e-07!286;UBERON:0000475!5.72e-07!365;UBERON:0000481!8.17e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.69e-09;33!UBERON:0004571;2.69e-09;33!UBERON:0001637;5.00e-09;42!UBERON:0003509;5.00e-09;42!UBERON:0004572;5.00e-09;42!UBERON:0004237;1.87e-08;10!UBERON:0004695;1.87e-08;10!UBERON:0002111;1.87e-08;10!UBERON:0004178;1.87e-08;10!UBERON:0001135;3.32e-08;15!UBERON:0002385;5.34e-07;31!UBERON:0001015;5.34e-07;31!UBERON:0000383;5.34e-07;31!UBERON:0003834;9.63e-07;5!UBERON:0001533;9.63e-07;5 | |||
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| ||
|short_description=p@chr3:145824416..145824437,- | |short_description=p@chr3:145824416..145824437,- | ||
}} | }} |
Latest revision as of 16:37, 29 July 2015
Short description: | p@chr3:145824416..145824437, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:145824416..145824437, - |
Coexpression cluster: | C1512_Smooth_hepatic_mesenchymal_Mallassezderived_Small_Gingival_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.69e-15 | 32 |
muscle precursor cell | 4.32e-14 | 58 |
myoblast | 4.32e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.32e-14 | 58 |
smooth muscle cell | 5.68e-14 | 43 |
smooth muscle myoblast | 5.68e-14 | 43 |
mesodermal cell | 1.31e-13 | 121 |
muscle cell | 3.37e-12 | 55 |
mesothelial cell | 2.01e-10 | 19 |
electrically responsive cell | 5.15e-10 | 61 |
electrically active cell | 5.15e-10 | 61 |
aortic smooth muscle cell | 2.63e-08 | 10 |
embryonic cell | 5.70e-08 | 250 |
multi fate stem cell | 7.11e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.29e-12 | 14 |