FFCP PHASE1:Hg19::chr3:128135240..128135252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:128135240..128135252,+ | |||
|coexpression_cluster_id=C970 | |coexpression_cluster_id=C970 | ||
|description=CAGE_peak_at_chr3:128135240..128135252,+ | |description=CAGE_peak_at_chr3:128135240..128135252,+ | ||
|id=chr3:128135240..128135252,+ | |id=chr3:128135240..128135252,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.38e-39!5;CL:0000457!1.38e-39!5;CL:0002191!1.38e-39!5;CL:0000097!1.38e-39!5;CL:0000831!1.38e-39!5;CL:0002028!1.38e-39!5;CL:0000163!5.68e-22!9;CL:0000763!2.13e-21!112;CL:0000049!2.13e-21!112;CL:0002032!1.85e-13!165;CL:0000837!1.85e-13!165;CL:0000037!9.00e-13!172;CL:0000566!9.00e-13!172;CL:0000988!6.98e-12!182;CL:0002150!7.74e-11!3;CL:0000861!7.74e-11!3 | |ontology_enrichment_celltype=CL:0002274!1.38e-39!5;CL:0000457!1.38e-39!5;CL:0002191!1.38e-39!5;CL:0000097!1.38e-39!5;CL:0000831!1.38e-39!5;CL:0002028!1.38e-39!5;CL:0000163!5.68e-22!9;CL:0000763!2.13e-21!112;CL:0000049!2.13e-21!112;CL:0002032!1.85e-13!165;CL:0000837!1.85e-13!165;CL:0000037!9.00e-13!172;CL:0000566!9.00e-13!172;CL:0000988!6.98e-12!182;CL:0002150!7.74e-11!3;CL:0000861!7.74e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.08e-40;5!CL:0000163;7.77e-23;9!CL:0000763;2.37e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.23e-40,5;CL:0002028,2.23e-40,5;CL:0000163,8.06e-23,9;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.54e-46!8;DOID:8692!5.95e-34!31;DOID:1240!1.45e-26!39;DOID:2531!8.02e-20!51;DOID:0060083!8.02e-20!51;DOID:9119!2.04e-09!1;DOID:8552!4.54e-09!1;DOID:0050686!3.53e-07!137 | |ontology_enrichment_disease=DOID:1036!3.54e-46!8;DOID:8692!5.95e-34!31;DOID:1240!1.45e-26!39;DOID:2531!8.02e-20!51;DOID:0060083!8.02e-20!51;DOID:9119!2.04e-09!1;DOID:8552!4.54e-09!1;DOID:0050686!3.53e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.26e-24;31!DOID:9119;2.34e-23;1!DOID:1240;7.12e-16;39!DOID:1036;6.88e-12;8!DOID:2531;1.35e-11;51!DOID:0060083;1.35e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.97e-25,31;DOID:9119,2.10e-23,1;DOID:1240,3.02e-20,39;DOID:2531,1.66e-15,51;DOID:0060083,1.66e-15,51;DOID:1036,6.51e-12,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr3:128135240..128135252,+ | |short_description=p@chr3:128135240..128135252,+ | ||
}} | }} |
Latest revision as of 15:31, 29 July 2015
Short description: | p@chr3:128135240..128135252, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:128135240..128135252, + |
Coexpression cluster: | C970_acute_Mast_Reticulocytes_chronic_blood_leukemia_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.23e-40 | 5 |
basophil mast progenitor cell | 2.23e-40 | 5 |
endocrine cell | 8.06e-23 | 9 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.97e-25 | 31 |
acute myeloid leukemia | 2.10e-23 | 1 |
leukemia | 3.02e-20 | 39 |
hematologic cancer | 1.66e-15 | 51 |
immune system cancer | 1.66e-15 | 51 |
chronic leukemia | 6.51e-12 | 8 |